mRNA_F-serratus_M_contig140.2907.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 170 bits (430), Expect = 2.230e-49 Identity = 90/175 (51.43%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 13 MGDGYCDSGYNNEACGWDGGDCCECTCVFNLKRDASCEPNNFTCMDPDSGCVDA--TLLDYIDCNGDVGSIGNGFCDSYNNNNEACGWDGGDCCECTCAPDCKGENGYDFF---------CLDPNSKCA---DLTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
GDG+CD NNE CG+DGGDCCECTCV D SC N+ C+DP + CVD +D ++ G VGS+GNG+CD NNN E CG+DGGDCCECTC P + D+F C+DPN+ C D+TL NC D +G+G CD +NNNEAC +DGGDCC+CTC
Sbjct: 61 FGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCAANS-ACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNN-EGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENC--DSVAVGNGFCDMDNNNEACAYDGGDCCECTC 231
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 147 bits (372), Expect = 6.720e-40 Identity = 84/183 (45.90%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 13 MGDGYCDSGYNNEACGWDGGDCCECTCVFN----LKRDASCEPN---NFTCMDPDSGCVD-----ATLLDYIDCNGDVGSIGNGFCDSYNNNNEACGWDGGDCCECTCAPDCKGENGYDFFC-------LDPNSKCAD---LTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
+G+G CDS NNE C +DGGDCCECTC + C+ F C+DPD+ CVD A ++D G IGNG+CD NN+ E C +DGGDCCECTC ++GY+++C +DP ++C D T +Y +C G V IGDG CD ENN E CG+DGGDCC CTC
Sbjct: 166 IGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLCS----TGQIGNGYCDDSNNSPE-CAYDGGDCCECTCE---SHDDGYEYYCEPGSFACIDPEAECVDDDDNTAEQYEHC-GWVTRIGDGMCDDENNKEECGFDGGDCCDCTC 339
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 149 bits (376), Expect = 9.220e-39 Identity = 87/190 (45.79%), Postives = 109/190 (57.37%), Query Frame = 1
Query: 13 MGDGYCDSGYNNEACGWDGGDCCECTCVFNLKRDAS---------CEP--NNFTCMDPDSGCV--DATLLDYIDCNGDVGSIGNGFCDSYNNNNEACGWDGGDCCECTC-APDCK------------GENGYDFFCLDPNSKCAD---LTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
+GDGYCD NNE CG+DGGDCCECTCV K S C + F C+DP + CV D D ++ G V +G+G+C NNN E CG+DGGDCCECTC AP G G F C+DP++ C D +T+ +C D +IGDG C+ +NNNEAC +DGGDCC+CTC
Sbjct: 59 LGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNN-ELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESC--DTVSIGDGYCNMDNNNEACAYDGGDCCECTC 245
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 144 bits (364), Expect = 2.090e-37 Identity = 83/175 (47.43%), Postives = 101/175 (57.71%), Query Frame = 1
Query: 13 MGDGYCDSGYNNEACGWDGGDCCECTCVFNLKRD----ASCEPNNFTCMDPDSGCVDATLLDY-IDCNGDVGSIGNGFCDSYNNNNEACGWDGGDCCECTCAPDCKGENGY------DFFCLDPNSKCAD---LTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
GDGYC NN CG+DGGDCCECTC D S + F C+DPD+ CVD + I N +GNG+CD +NNNE CG+D GDCCECTC ++ Y F C+DP + C D +T+ NC G V +GDG CD NNNE CG+DGGDCC+CTC
Sbjct: 29 FGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCVTSDLGNGYCDE-DNNNEICGYDFGDCCECTCVSPWDDDDWYCSSDGSGFACIDPAAPCVDDDDVTIDMVENC-GYVRGLGDGWCDDWNNNELCGYDGGDCCECTC 201
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 142 bits (358), Expect = 5.710e-37 Identity = 83/178 (46.63%), Postives = 103/178 (57.87%), Query Frame = 1
Query: 13 MGDGYCDSGYNNEACGWDGGDCCECTCVFNLKRDASCEPNNFTCMDPDSGCVD---ATLLDYIDCNGDVGSIGNGFCDSYNNNNEACGWDGGDCCECTCAPDCKGENGYD-----------FFCLDPNSKCAD---LTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
+GDGYC N C +DGGDCC CTC D C F C+DP++ CVD T+ + +C V IGNG+CD NN EACG+DGGDCCECTC + E+ YD F C+DP++ C D +T+ NC G V+ IG+G CD NN E CG+DGGDCC CTC
Sbjct: 131 IGDGYCSENLNTPECAYDGGDCCSCTCESPYDDDWGCMW--FACIDPEAACVDDDDITVDMFENCEYPV-DIGNGWCDEANNI-EACGYDGGDCCECTC----EYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENC-GYVSGIGNGWCDRNNNKEECGYDGGDCCSCTC 299
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 143 bits (360), Expect = 1.640e-36 Identity = 80/174 (45.98%), Postives = 101/174 (58.05%), Query Frame = 1
Query: 1 YLGSMGDGYCDSGYNNEACGWDGGDCCECTCVFNLKRDASCEPNNFTCMDPDSGCVD-----ATLLDYI-DCNGDVGSIGNGFCDSYNNNNEACGWDGGDCCECTC---APDCKGENGYDFFCLDPNSKCADLTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
Y+ S+GDG+C NNE C +DGGDCCECTCV C F C+DP + CVD A + + D G V +GNG+C+ NN E C +D GDCC+CTC + D + DF C+DPN+ C D + E D N GDG C+ NNNE CG+DGGDCC+CTC
Sbjct: 70 YVASIGDGFCSDENNNEVCDYDGGDCCECTCVDAFYP---CGYVAFACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEE-CDYDAGDCCQCTCGIESDDLSDFSCVDFACVDPNAPCVDDDVTE--GMFEDCFNFGDGFCNDYNNNEQCGYDGGDCCECTC 237
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 139 bits (349), Expect = 7.990e-36 Identity = 82/178 (46.07%), Postives = 102/178 (57.30%), Query Frame = 1
Query: 16 GDGYCDSGYNNEACGWDGGDCCECTCVFNLKRDAS--CEPNN--FTCMDPDSGCV---DATLLDYIDCNGDVGSIGNGFCDSYNNNNEACGWDGGDCCECTCA--PDCKGEN------GYDFFCLDPNSKCA---DLTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
GDGYC NN CG+DGGDCCECTC D C N F C+DPD+ C T+ +C D +G+G+CD NNN E CG+DGGDCCECTC D +N G F C+DP++ C D+T+ +C D +GDG CD +NNN AC +DGGDCC+CTC
Sbjct: 37 GDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQEC--DFWDLGDGWCDQVNNN-ELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESC--DAVGMGDGYCDMDNNNAACAYDGGDCCECTC 209
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 137 bits (346), Expect = 7.680e-35 Identity = 80/177 (45.20%), Postives = 103/177 (58.19%), Query Frame = 1
Query: 10 SMGDGYCDSGYNNEACGWDGGDCCECTCVF---NLKRDASC--EPNNFTCMDPDSGCVD-----ATLLDYID--CNGDVGSIGNGFCDSYNNNNEACGWDGGDCCECTCAPDCKGENGYDFFCLDPNSKCAD---LTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
++GDG CD N E C +DGGDCC CTC D S E F C+DPD+ CV+ A L + + C G++ + +G CD NNN E CG+DGGDCC CTC D F C+DP+++CAD +T+ NC V +IGDG+CD +NN E C +DGGDCC CTC
Sbjct: 103 AIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEE-CGYDGGDCCFCTCLDDFYECGIRGFACIDPSAECADDDDVTVDTVENCG--VRSIGDGQCDLDNNREECHYDGGDCCSCTC 276
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.590e-34 Identity = 74/170 (43.53%), Postives = 98/170 (57.65%), Query Frame = 1
Query: 10 SMGDGYCDSGYNNEACGWDGGDCCECTCVFNLKRDASCEPNNFTCMDPDSGCVDA--TLLDYIDCNGDVGSIGNGFCDSYNNNNEACGWDGGDCCECTCAPDCKG----ENGYDFFCLDPNSKCAD--LTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
+ GDG+C+ NNE CG+DGGDCCECTCV + + C F C+DP + CVD D ++ N + +G+G+CD+YNN E C +DGGDCCECTC D C+DP + C D +T+ Y C DV +GD C+ NN E C +D GDCC+ TC
Sbjct: 61 NFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGC--TEFACIDPTAPCVDDDDVTADALE-NCMMEYLGDGYCDTYNNI-EICDYDGGDCCECTCGSDSTDVLDXXXXXXXXCIDPTASCFDENITVDMYEYC--DVELLGDSICNLSNNFEVCDYDFGDCCEATC 224
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE) HSP 1 Score: 135 bits (341), Expect = 2.250e-34 Identity = 82/184 (44.57%), Postives = 97/184 (52.72%), Query Frame = 1
Query: 1 YLGSMGDGYCDSGYNNEACGWDGGDCCECTCVFNLKRDASCEPNN--FTCMDPDSGCVDATLLDYIDCNGDVG-SIGNGFCDSYNNNNEACGWDGGDCCECTCAP-------DCKGENGYDFFCLDPN--SKCAD-------LTLLEYTNCTGDVANIGDGRCDYENNNEACGWDGGDCCQCTC 495
Y+ +GDGYCD N ACG+DGGDCC CTC + + D C N + C DPD D L ++ C G G +G+CD N E CG+DGGDCC CTC G GYD CLDP S C+ ++ C G + IGDG CDY NNNE C WDGGDCC CTC
Sbjct: 165 YIPHIGDGYCDEDNNTAACGFDGGDCCACTCGMDAEVDHECGLLNDGYDCRDPDVP-EDCNLANFAQCEGMNGYDWQDGYCDDDLNTAE-CGYDGGDCCRCTCRDYDSWGYYSSCGYYGYD--CLDPEAPSSCSTDSPTPSPAAGTDWPECEGYLFEIGDGHCDYYNNNEECDWDGGDCCACTC 344 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig140.2907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig140.2907.1 >prot_F-serratus_M_contig140.2907.1 ID=prot_F-serratus_M_contig140.2907.1|Name=mRNA_F-serratus_M_contig140.2907.1|organism=Fucus serratus male|type=polypeptide|length=161bp MGDGYCDSGYNNEACGWDGGDCCECTCVFNLKRDASCEPNNFTCMDPDSGback to top mRNA from alignment at F-serratus_M_contig140:63375..63869+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig140.2907.1 ID=mRNA_F-serratus_M_contig140.2907.1|Name=mRNA_F-serratus_M_contig140.2907.1|organism=Fucus serratus male|type=mRNA|length=495bp|location=Sequence derived from alignment at F-serratus_M_contig140:63375..63869+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig140:63375..63869+ >mRNA_F-serratus_M_contig140.2907.1 ID=mRNA_F-serratus_M_contig140.2907.1|Name=mRNA_F-serratus_M_contig140.2907.1|organism=Fucus serratus male|type=CDS|length=966bp|location=Sequence derived from alignment at F-serratus_M_contig140:63375..63869+ (Fucus serratus male)back to top |