mRNA_F-serratus_M_contig136.2653.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: D7G122_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G122_ECTSI) HSP 1 Score: 103 bits (257), Expect = 3.690e-23 Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 3
Query: 27 TRWSCKEDLLDDNCNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIESTGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
+RWSC E L D C I + FEEPQDIVRI I FYKGDER R LK+ + I S+G +++ E +++NT ET L++E L L DEWISI+EV+FMV
Sbjct: 49 SRWSCSEKLEDAQCKITYKFEEPQDIVRIKIKFYKGDERVRTLKLKGSDGFEKTITSSGTSSKYETWDINTDETKWLSMEALNLDDDEWISITEVRFMV 147
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 2.310e-16 Identity = 46/105 (43.81%), Postives = 63/105 (60.00%), Query Frame = 3
Query: 18 DISTRWSCKEDLLDDN--CNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIES-TGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
D +RWSC E+++ D C I F F+ PQDI + +AF+KGDERTR LKV +NG ES G T F + T+ +E +G+ D+WIS+ EV+FMV
Sbjct: 16 DTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVAMESVGIDADDWISLLEVRFMV 118
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 8.560e-15 Identity = 50/112 (44.64%), Postives = 65/112 (58.04%), Query Frame = 3
Query: 3 NTRDG---DISTRWSCKEDLLDDN--CNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIESTGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
NTRDG +I +RWSC L+DD C I F F EPQ IV I +AF+KG+ERTR L+V +NG + ES A + + +T+ LE + L DEWIS+ EV V
Sbjct: 125 NTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYAD-ATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFV 235
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 9.260e-15 Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 3
Query: 18 DISTRWSCKEDLLDDN--CNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIES-TGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
D +RWSC E+++ D C I F F+ PQDI + +AF+KGDERTR LKV +NG ES G T F + T+T+E +G+ D+WIS+ EV+FMV
Sbjct: 298 DTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGST--FNSFGIQENGVHTVTMESVGIDRDDWISLLEVRFMV 400
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 7.980e-14 Identity = 50/112 (44.64%), Postives = 65/112 (58.04%), Query Frame = 3
Query: 3 NTRDG---DISTRWSCKEDLLDDN--CNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIESTGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
NTRDG +I +RWSC L+DD C I F F EPQ IV I +AF+KG+ERTR L+V +NG + ES A + + +T+ LE + L DEWIS+ EV V
Sbjct: 376 NTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYAD-ATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFV 486
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 2.190e-13 Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 3
Query: 18 DISTRWSCKEDLLDDN--CNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIES-TGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
D+ +RWSC ED++ D C I F F PQ++ ++ + F+KG+ERTR LKV +NG +S G F++ + T+TLE LGL DEWIS+ EV FMV
Sbjct: 237 DVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSVTSY--FDVIAYDVHTVTLESLGLDTDEWISLLEVIFMV 339
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 3.690e-13 Identity = 49/112 (43.75%), Postives = 65/112 (58.04%), Query Frame = 3
Query: 3 NTRDG---DISTRWSCKEDLLDDN--CNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIESTGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
NTRDG +I +RWSC L+DD C I F F EPQ I+ I +AF+KG+ERTR L+V +NG + ES A + + +T+ LE + L DEWIS+ EV V
Sbjct: 403 NTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYAD-ATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFV 513
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 9.610e-13 Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 3
Query: 3 NTRDG---DISTRWSCKEDLLDDN--CNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIESTGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
N RDG +I +RWSC LLDD C I F F EPQ+IV I +AF+KG+ER R L+V +NG + ES + + E T+ LE + L +EWIS+ EV V
Sbjct: 194 NARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADST-FNTLGVTANEANTVMLESVSLLSNEWISLIEVLIFV 304
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 9.810e-13 Identity = 48/112 (42.86%), Postives = 62/112 (55.36%), Query Frame = 3
Query: 3 NTRDG---DISTRWSCKEDLLDDN--CNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIESTGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
NTRDG +I +RWSC L+ D C I F F EPQ IV I +AF+KG++RTR L V +NG + ES + + E +T+ LE L DEWIS+ EV V
Sbjct: 61 NTRDGIFSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDST-FNTLGVTANEASTVMLESTALLSDEWISLIEVLIFV 171
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 4.380e-12 Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 3
Query: 3 NTRDG---DISTRWSCKEDLLDDN--CNIMFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIESTGKTAELEDFELNTGETTTLTLEGLGLSGDEWISISEVQFMV 323
NTRDG DI +RWSC L+ D C I F F EPQ++V I +AF+KG+ERTR L V +NG + ES + + E +T+ LE + L DEWIS+ EV V
Sbjct: 499 NTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADST-FNTLGVTATEASTVMLESVALLSDEWISLLEVLIFV 609 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig136.2653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig136.2653.1 >prot_F-serratus_M_contig136.2653.1 ID=prot_F-serratus_M_contig136.2653.1|Name=mRNA_F-serratus_M_contig136.2653.1|organism=Fucus serratus male|type=polypeptide|length=85bp MFIFEEPQDIVRILIAFYKGDERTRKLKVILNGSSRYVIESTGKTAELEDback to top mRNA from alignment at F-serratus_M_contig136:71405..72732- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig136.2653.1 ID=mRNA_F-serratus_M_contig136.2653.1|Name=mRNA_F-serratus_M_contig136.2653.1|organism=Fucus serratus male|type=mRNA|length=1328bp|location=Sequence derived from alignment at F-serratus_M_contig136:71405..72732- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig136:71405..72732- >mRNA_F-serratus_M_contig136.2653.1 ID=mRNA_F-serratus_M_contig136.2653.1|Name=mRNA_F-serratus_M_contig136.2653.1|organism=Fucus serratus male|type=CDS|length=510bp|location=Sequence derived from alignment at F-serratus_M_contig136:71405..72732- (Fucus serratus male)back to top |