mRNA_F-serratus_M_contig1286.2105.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: A0A6H5KH14_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH14_9PHAE) HSP 1 Score: 322 bits (825), Expect = 1.640e-100 Identity = 181/309 (58.58%), Postives = 213/309 (68.93%), Query Frame = 1
Query: 1 SMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCEKPPLTGEFAEERDTGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIKNTRASPEEAEAADLADLGLAIELSKASH--LADTGVSADDHXXXXXRASHDGASAPSGLVGDTMGGNDANEVDLLGLLGEDTGKAAGGSGSDLGAKRKFQPGITIDSARFQSLWTRTGVGMKSSFDLIGLPRSTDEVEGLLSARGVYTMASGDKPTTMKFFFYAKDFSGSMHLMQCSVLKPEMSLDVVVKRETSDAAESAQVMADVLRDALSSYLR 921
SMLGRLLARAVND+SSQDLHDRALLYHRLLKHDPEVARRVCCCE+PP++GEFAE+RDTG RD IFSEFNTLSM+YDD S+NFTLPE+R KK+KNTRA P EAEA DLADLGLA+E SKA L D V+A XXXX +FQ GITI+S +FQSLW G G++SSF++ +P ST EVEGLL+ARGV TMASG+KP MKFFFYAKD G +LMQCSVLKPE L++VVK + D AESA+V++ V+++A + YLR
Sbjct: 527 SMLGRLLARAVNDLSSQDLHDRALLYHRLLKHDPEVARRVCCCERPPVSGEFAEDRDTGRRDVIFSEFNTLSMVYDDHSDNFTLPEFRAKKVKNTRAIPGEAEANDLADLGLALERSKADQQQLYDAAVTAPAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGV-----EFQTGITINSGQFQSLWAALGAGVESSFEMSKVPASTQEVEGLLTARGVNTMASGNKPAAMKFFFYAKDVLGLTYLMQCSVLKPERLLELVVKSDAPDPAESARVISGVVKEAFALYLR 830
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: A0A7S4D7F5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7F5_HETAK) HSP 1 Score: 162 bits (411), Expect = 1.790e-43 Identity = 115/303 (37.95%), Postives = 160/303 (52.81%), Query Frame = 1
Query: 4 MLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCEKPPLTGEFAEERDTGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIKNTRASPEEAEAADLADLGLAIELSKASHLADTGVSADDHXXXXXRASHDGASAPSGLVGDTMGGNDANEVDLLGLLGEDTGKAAGGSGSDLGAKRKFQPGITIDSARFQSLWTRTGVGMKSSFDLIGLPRSTDEVEGLLSARGVYTMASGDKPTTMKFFFYAKDFSGSMHLMQCSVLKPEMSLDVVVKRETSDAAESAQVMADVLRDALSS 912
MLGRLLA A+ D S QDLHDRALLY+RLL+ +PE+A++V P+ FAEE DTG ++ IF EFN+LS++YD E + PEY+V++ K+ ++ + + E + LA G +A + + D A + +M DLLG +D G A+ L G + FQ+LW R G + L LP E L S + +YTMASGD P MKFFF+AKD SG L+QC K ++++VVK TS+ A++AQ +ADV AL S
Sbjct: 125 MLGRLLAAALRDASCQDLHDRALLYYRLLRANPEIAKQVIASNIQPVA-HFAEEIDTGFKEKIFKEFNSLSILYDKTEEQYIAPEYQVQQSKDNDDRSDDGDNSS-------NEQPQNGTLAPAGPNAANTPIAHQQDMLDSAPPAVAPLEASM--------DLLGF--DDDGPASAAPPPPLA----LVEGAAVSGEEFQTLWGRLPDGCSKEYVLEPLPTQAMFEERLQSHK-IYTMASGDLPDMMKFFFFAKDTSGQTFLVQCIAQKQNSTVNIVVKT-TSEVAQAAQHLADVFIIALRS 403
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: A0A835YU68_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU68_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.890e-42 Identity = 124/321 (38.63%), Postives = 156/321 (48.60%), Query Frame = 1
Query: 1 SMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCEKPP------------LTGEFAEERDTGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIKNTRASPEEAEAA-DLADLGLAIELSKASHLADTGVSADDHXXXXXRASHDGASAPSGLVGDTMGGNDANEVDLLGLLGEDTGKAAGGSGSDLGAKRK--FQPGITIDSARFQSLWTRTGVGMKSSFDLIGLPRSTDEVEGLLSARGVYTMASGDKPTTMKFFFYA--KDFSGSMHLMQCSVLKPEMSLDVVVKRETSDAAESAQVMADVLRDALSS 912
SMLGRLLA AV DVSSQDLHDRALLY+RLL+ D + AR V C E L G FAEERDT LRDAIF+EFNTL++ Y + S+ FT P YRV + P EA A +LADLGLA XXXXX +PG + + +FQ+LW ++ P T EVEG +SA + TMASGDKP TM+FFFY D +HL+QC++LK +LDVV+K +DAA +A +A V++ A +
Sbjct: 541 SMLGRLLAAAVEDVSSQDLHDRALLYYRLLRADADAARAVICGEHAAXXXXXXXXXXAALDGPFAEERDTSLRDAIFAEFNTLAVAYGEPSDAFTAPPYRVARAAPPPWMPPEARLARELADLGLAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLRPGPAMGAPQFQALWGELAEAAVVQGVVLRAPAGTGEVEGRMSAACLRTMASGDKPETMRFFFYGYGSDNPSEVHLVQCTLLKSSCALDVVIKTTAADAAPAAHAVAAVVKHAFGA 861
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: A0A6V2IVW9_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IVW9_9STRA) HSP 1 Score: 149 bits (377), Expect = 7.070e-39 Identity = 117/322 (36.34%), Postives = 166/322 (51.55%), Query Frame = 1
Query: 4 MLGRLLARAVNDVSSQDLHDRALLYHRLLKH--DPEVARRVCCCEKPPLTG----EFAEERDTGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIKNTRASPEEAEAADLADLGLAIELSKASHLADTGVSADDHXXXXXRASHDGA--SAPSGLVGDTMGGNDANEVDLLGL-LGED--TGKAAGGSGSDLGAKRKFQPGITIDSARFQSLWTRTGVGMKSSFDLIGLPRSTDEVEGLLSARGVYTMASGDKPTTMKFFFYAKDF--SGSMHLMQCSVLK-PEMSLDVVVKRETSDAAES---AQVMADVLRDALSSYL 918
MLGRLLA+A DVSSQDLHDRAL+Y+RLL DP++ +V K P+ G FAEE D RDA+ EFNTLS +Y SENF EY+VK ++ + P + AA L D G+ A HL T + +D A SAP+ + G EVDLLG LG+ + SD+ F+ A+++++ + + S L P STD VE LS + TMASG+ PT +KFF Y ++ +G + L+Q + K P++SL + +K D A S +Q + D+++ AL +
Sbjct: 65 MLGRLLAKATEDVSSQDLHDRALMYYRLLSTAGDPKIVEQVV--SKSPVIGGHGVNFAEEEDKEHRDALLEEFNTLSTLYGITSENFISEEYQVKLVRMPKEHPLDVGAAPLVDPGVN---GVAEHLQQTSI-------------NDVAPESAPAAPAAPALSG----EVDLLGFGLGDGPMVAPTPAAASSDISLDASFKISGEDYQAKWEAVADSHALSVMMSLRL--QPESTDLVESALSTLNILTMASGELPTELKFFLYGRERRENGMIFLIQAVIFKSPDLSLSITIKTSGGDQARSGELSQKVVDMMKTALQELM 362
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: A0A7S1DCP4_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCP4_CYCTE) HSP 1 Score: 133 bits (335), Expect = 1.570e-32 Identity = 106/273 (38.83%), Postives = 140/273 (51.28%), Query Frame = 1
Query: 4 MLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCEKP-PLTGEFAEERDTGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIKNTRASPEEAEAADLADLGLAIELSKASHLADTGVSADDHXXXXXRASHDGASAPSGLVGDTMGGNDANEVDLLGLLGEDTGKAAGGSGSDLGAKRKFQPGITIDSARFQSLWTRTG--VGMKSSFDLIGLPRSTDEVEGLLSARGVYTMASGDKPTTMKFFFYAKDFSGSMHLMQCSVLK 813
MLGRLLA+A +DVSSQDLHDRALLY+RL++ DP+V V P F+EE D LR A+ EFNTLS IY S NF PE++V +K P LA A E++ + ++ XXXXX P+ V D +G +D T A G + S A QP + +QS W+ + ++ L LP STD+VE L+A V TMASG+ PT KFFFYAKD G ++L+Q ++ K
Sbjct: 123 MLGRLLAKATDDVSSQDLHDRALLYYRLMQTDPKVVETVLKTNTAIPSNINFSEEEDDELRAALMEEFNTLSTIYGKTSVNFIGPEHQVAYVKMPEDHP-------LAPGAAATEVAPSP----VAINXXXXXXXXXXXXXXXXXTPAAGVVDLLGFDDTQPK----AQPSPTAPAPGPTQSTTLA---LQPSANMSGDEYQSHWSSIADSEAVVNTVPLSALPTSTDQVEHALAAFNVNTMASGELPTEFKFFFYAKDTDGDVYLIQSNLNK 377
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: B8C1G4_THAPS (Beta subunit of clathrin adaptor complex AP2 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1G4_THAPS) HSP 1 Score: 130 bits (326), Expect = 5.510e-30 Identity = 103/297 (34.68%), Postives = 144/297 (48.48%), Query Frame = 1
Query: 4 MLGRLLARAVNDVSSQDLHDRALLYHRLLKH--DPEVARRVCCCEKPPLTGE-FAEERDTGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIK--NTRASPEEAEAADLADLGLAIELSKASHLADTGVSADDHXXXXXRASHDGASAPSGLVGDTMGGNDANEVDLLGLLGEDTGKAAGGSGSDLGAKR-KFQPGITIDSARFQSLW---TRTGVGMKSSFDLIGLPRSTDEVEGLLSARGVYTMASGDKPTTMKFFFYAKD---FSGSMHLMQCSVLKPEMSLDVVVKRETSD 858
MLGRLL +A DV+SQDLHDRAL Y+RLL+ DP VA+ + + +T + FAEE D+ L+ A+ EFNTL IY R+ENF E V+ +K P EA A + D G+ +++ D A A P+ + G EVDLLG + G + S + + +++ +Q W + T + S+ + P STD VEG LSA V+TMASG+ PT KFF Y ++ F G L+Q V K SL + +K D
Sbjct: 557 MLGRLLKKATEDVTSQDLHDRALFYYRLLRSSPDPSVAKSIITSKSMTMTTDHFAEEDDSELKAALMDEFNTLCTIYHCRAENFIDDENIVRFVKMPTDHPLPREAVVAPVVDPGV-------NNITDQFGGASL------------AETPAPVAAPAYSG----EVDLLGFGDDSMGAPPPPAASTSTLQSLSLKSNVSLTGEEYQHKWGAVSDTEAVVISALPISNSPSSTDTVEGALSAFSVFTMASGELPTEFKFFLYGQEEDSFGGGFFLIQAVVQKAPASLTLTIKPNGGD 830
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: K0SY98_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SY98_THAOC) HSP 1 Score: 128 bits (321), Expect = 2.600e-29 Identity = 98/319 (30.72%), Postives = 146/319 (45.77%), Query Frame = 1
Query: 4 MLGRLLARAVNDVSSQDLHDRALLYHRLLKH--DPEVARRVCCCEKPPLTGEFAEERDTGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIKNTRASPEEAEAADLADLGLAIELSKASHLADTGVSA-DDHXXXXXRASHDGASAPSGLVGDTMGGNDANEVDLLGLLGEDTGKAAGGSGSDLGAKRKFQPGITIDSARFQSLWTRTGVG---MKSSFDLIGLPRSTDEVEGLLSARGVYTMASGDKPTTMKFFFYAKD---FSGSMHLMQCSVLKPEMSLDVVVKRETSDA-----AESAQVMADVLRDALSSYL 918
MLGRL +A DVSSQDLHDRAL Y+RLL+ DP++ + + T +FAEE D+ L+ A+ EFNTL +Y + ENF V ++ + P ++A + + D GV+A D G +AP G EVDLLG ++ A S + + +T+ +QSLW G + + + P +TD VE L V+TMASG+ PT KFF Y ++ F G L+Q +LK SL + +K D E + ++++ +L Y+
Sbjct: 611 MLGRLFKKATEDVSSQDLHDRALFYYRLLRSSPDPDIVKSIISKSMTMSTRQFAEEDDSELKAALMDEFNTLCTVYRCKPENFIEDANIVPFVRMPKEHPLPSDAP-------------LAPVPDPGVNAVTDQLGGASITEQQGQAAPPPPAPAVTSG----EVDLLGFGFDEPATPAPVSSAGSLQSLSLKASVTLSGDAYQSLWGSVPDGEAIVTPALPMRTAPSATDAVEASLKTFNVFTMASGELPTEFKFFLYGQEEDAFGGGFFLIQAIMLKAPASLSLTIKVSGGDPDPTKRKEKTDQLIELIKSSLGQYI 912
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: A0A7S3L4E5_9STRA (AP complex subunit beta n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4E5_9STRA) HSP 1 Score: 124 bits (310), Expect = 7.020e-28 Identity = 106/305 (34.75%), Postives = 144/305 (47.21%), Query Frame = 1
Query: 4 MLGRLLARAVNDVSSQDLHDRALLYHRLLKH--DPEVARRVCCCEKP-PLTGEFAEERDTGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIKNTRASPEEAEAADLADLGLAIELSKASHLADTGVSADDHXXXXXRASHDGASAPSGLVGDTMGGNDANEVDLLGLLGEDTGKAAGGSGSDLGAKRKFQPGITIDSARFQSLWTRTGVG--MKSSFDLIGLPRSTDEVEGLLSARGVYTMASGDKPTTMKFFFYAKDFSGSMH-LMQCSVLK--PEMSLDVVVKRETSDAAESAQVMADVL 894
MLGRLLA+A +DVSSQDLHDRALLY+R+L+ DP + + P +F+EE D LR+ I EF+TL++IY S NF PEY+ K K P D +G+ H + ++A A+ A+AP +E DLLG G A + G Q +TI ++Q +W S L LP ST+ VE +L A V TMASGD P MKFF YA+D S + L+Q ++ K P+ L +V + + Q M D L
Sbjct: 532 MLGRLLAKATDDVSSQDLHDRALLYYRMLRSGTDPNLLESLVKTNSAVPEQAQFSEEDDAELRNKIMEEFDTLAIIYGKPSVNFIDPEYQFKYKKMPDDHP--LAPGDNGSVGV--------HSVPSTIAAP--------AAATSATAPP-----------TDEFDLLGFGGP---PAPAPPAPETGGFALNQD-VTITDTQYQEMWESVADADATVSMIQLRALPGSTEAVENVLEAAAVKTMASGDLPAEMKFFLYAQDSGSSCYFLIQANIEKSSPQEPLMIVTVKICGSIPGTTQAMTDQL 803
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: A0A4D9CWN1_9STRA (B2-adapt-app_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWN1_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.690e-25 Identity = 109/336 (32.44%), Postives = 158/336 (47.02%), Query Frame = 1
Query: 1 SMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCE------KPPLTGEFAEERD-TGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIKNT--------RASPEEAEAADLADLGLAIELSKASHLADTGVSADDHXXXXXRASHDGASAPSGLVGDTMGGNDANEVDLLGL-LGEDTGKAAGGSGSDLGAKRKFQPGIT--IDSAR-----FQSLWTRTGVGMKSSFDLIGLPRS-TDEVEGLLSARGVYTMASGDKPTTMKFFFYAKDFSGSMHLMQCSVLKPEMSLDVVVK-------RETSDAAE-SAQVMADVLRDALSS 912
SMLGRLLA A ND++SQD+HDRALLY+RLL D E A+RV E + + G FAEERD T LRD +F EFNTL++IY S F P YR+K + + + +L DL L A + + GV ++ S G++ P G T +D ++ +G+ L T + S S ++ F IDS R FQ LW + + DL LP +E L +RG+ +ASG+ K F Y + G ++L+Q + K L++ +K E D + SA + +++ LSS
Sbjct: 526 SMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEVDVNRTTIVGTFAEERDMTTLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNGNNLLDLHADDSLLPAGGV-ECGVESES-------PSRAGSTNPEGSTAYTGPSSDLLDMSDMGVSLAVPTDRITTPSAS----QQDFCTSTLALIDSFRMEPETFQHLWAELPESISYNVDLKVLPTDGLSTLETSLLSRGIKCLASGELTDVFKLFLYGQHELGRLYLIQILIHKLSKRLNLTLKIGRSEMESEGDDGKDRSANAVVELITQVLSS 849
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Match: B7G374_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G374_PHATC) HSP 1 Score: 116 bits (290), Expect = 3.030e-25 Identity = 102/280 (36.43%), Postives = 131/280 (46.79%), Query Frame = 1
Query: 4 MLGRLLARAVNDVSSQDLHDRALLYHRLLKH--DPEVARRVCCCEKPPLTG-EFAEERDTGLRDAIFSEFNTLSMIYDDRSENFTLPEYRVKKIKNTRASPEEAEAADLADLGLAIELSKASHLADTGVSADDHXXXXXRASHDGASAPSGLVGDTMGGNDANEVDLLGLLGEDTGKAAGGSGSDLGAKRKFQPGITIDSARFQSLW--TRTGVGMKSSFDLIGLPRSTDEVEGLLSARGVYTMASGDKPTTMKFFFYAKDFS-GSMHLMQCSVLKPEMS 825
MLGRLLA A +DVSSQDLHDRAL+Y+R+L+ DP RV G FAEE D+ LR + EFNTLS+IY S NF PE++VK K P+E A +TG A AS P +V +N+VDLLG + A S+ ++ +QS W S L LP STDE+E +L+A + TMASG+ P KFF YAKD S G+ ++Q +V K S
Sbjct: 531 MLGRLLAVATDDVSSQDLHDRALMYYRMLQSGADPHTLERVVRTSTVVAQGVSFAEEDDSELRKELMEEFNTLSIIYGKPSVNFIAPEFQVKYKK----MPDEHPLAP----------------GETG-----SFVAPPVAPVPAASIP--VV--------SNDVDLLGFGDAEPMAAPAPMASN---NLTLSASASMTGGEYQSQWGSVSDADATVSDVPLRALPSSTDEIENVLAAVNIMTMASGELPNEFKFFLYAKDSSSGATIMIQTNVDKSSPS 772 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1286.2105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1286.2105.1 >prot_F-serratus_M_contig1286.2105.1 ID=prot_F-serratus_M_contig1286.2105.1|Name=mRNA_F-serratus_M_contig1286.2105.1|organism=Fucus serratus male|type=polypeptide|length=307bp MLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCEKPPLTGEback to top mRNA from alignment at F-serratus_M_contig1286:8295..11919+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1286.2105.1 ID=mRNA_F-serratus_M_contig1286.2105.1|Name=mRNA_F-serratus_M_contig1286.2105.1|organism=Fucus serratus male|type=mRNA|length=3625bp|location=Sequence derived from alignment at F-serratus_M_contig1286:8295..11919+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1286:8295..11919+ >mRNA_F-serratus_M_contig1286.2105.1 ID=mRNA_F-serratus_M_contig1286.2105.1|Name=mRNA_F-serratus_M_contig1286.2105.1|organism=Fucus serratus male|type=CDS|length=1842bp|location=Sequence derived from alignment at F-serratus_M_contig1286:8295..11919+ (Fucus serratus male)back to top |