mRNA_F-serratus_M_contig126.1954.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: D7G774_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G774_ECTSI) HSP 1 Score: 134 bits (337), Expect = 3.210e-37 Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMGRDSEGETCPFKFHKGNGVWRSPEEYAWE 234
MAL AARG++ALHE+PGGPVVH DLQPRQLL+D +G VK+NDLNRCRFM RDS GE CPF KGNGVWRSPEEYA E
Sbjct: 107 MALQAARGIQALHEMPGGPVVHADLQPRQLLLDENGVVKVNDLNRCRFMARDSSGEPCPFYISKGNGVWRSPEEYAGE 184
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: A0A6H5JFK2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK2_9PHAE) HSP 1 Score: 134 bits (338), Expect = 3.070e-36 Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMGRDSEGETCPFKFHKGNGVWRSPEEYAWE 234
MAL AARG++ALHE+PGGPVVH DLQPRQLL+D +G VK+NDLNRCRFM RDS GE CPF KGNGVWRSPEEYA E
Sbjct: 233 MALQAARGIQALHEMPGGPVVHADLQPRQLLLDDNGVVKVNDLNRCRFMARDSSGEPCPFYISKGNGVWRSPEEYAGE 310
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: B7G367_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G367_PHATC) HSP 1 Score: 108 bits (269), Expect = 9.640e-26 Identity = 51/77 (66.23%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMG-RDSEGETCPFKFHKGNGVWRSPEEYA 228
+AL AAR +RALHE+PGGP+VH DLQPRQ L+ DGTVKLND NRCRFMG R G CP G WRSPEEYA
Sbjct: 379 LALQAARAVRALHELPGGPIVHADLQPRQYLVKDDGTVKLNDFNRCRFMGHRYDTGACCPLHIPSAPGKWRSPEEYA 455
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: A0A1Z5KBS5_FISSO (Protein kinase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBS5_FISSO) HSP 1 Score: 102 bits (253), Expect = 1.370e-23 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMGRDSEGETCPFKFHKGNGVWRSPEEYAWE 234
+ALD ARG++ALHEIPGGP++H D+QPRQ L+ +G +K+ND NRCRFMG+D+ G C G RSPEEY E
Sbjct: 338 LALDVARGMKALHEIPGGPIIHADIQPRQFLVSSNGVLKVNDFNRCRFMGQDARGIPCKLMIPSAPGKARSPEEYEGE 415
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: D8LHZ9_ECTSI (Serine/threonine-protein kinase pkn5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ9_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 5.970e-23 Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMGRDSEGETCPFKFHKGN-GVWRSPEEYAWE 234
MALDAARGL+ALHE PGG +VH D++P+QL++D G +K+NDLN C F D++G TCP++ G WRSPE A E
Sbjct: 51 MALDAARGLQALHEAPGGAIVHFDMKPQQLMVDDQGRLKINDLNMCSFTDADADGNTCPYESTASRVGPWRSPENIAGE 129
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: A0A6H5J7B7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7B7_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 2.230e-21 Identity = 43/79 (54.43%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMGRDSEGETCPFKFHKGN-GVWRSPEEYAWE 234
MALDAARGL+ALHE PGG ++H D++P+QL++D G +K+NDLN C F D++G TCP++ G WRSPE A E
Sbjct: 350 MALDAARGLQALHEAPGGTIIHFDMKPQQLMVDDQGRLKINDLNMCSFPDTDADGNTCPYESSASRVGPWRSPENIAGE 428
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: D8LI06_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI06_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 6.500e-21 Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMGRDSEGETCPFKFHK-GNGVWRSPEEYAWE 234
MALDAARGL+ALHE PGG +VH D++P+QL++D G VK+NDL+ CRF D EG TCP+ +G +RSPE A E
Sbjct: 105 MALDAARGLQALHEAPGGAIVHSDIKPQQLMLDEYGRVKINDLSMCRFPPADVEGNTCPYPARACKSGPFRSPENIAGE 183
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: A0A6H5JYW8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW8_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 7.630e-21 Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMGRDSEGETCPFKF---HKGN-GVWRSPEEYA 228
M+LDA RGL+ALHE GGPVVH D++P QLL+ GDG VKLND N FM R +G+ CPF H+G WRSPE +A
Sbjct: 96 MSLDAVRGLQALHEAVGGPVVHFDIKPPQLLVTGDGRVKLNDFNVAWFMSRGPDGKPCPFNMGIKHRGQTSPWRSPEYHA 175
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: A0A7R9W586_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W586_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 2.260e-19 Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGD-GTVKLNDLNRCRFMGRDS-EGETCPFKFHKGNGVWRSPEEY 225
+ALD RGL +LH IPGGP++H D+Q +Q L+D G VK+ND NRCRF+ RD+ G CP + G RSPEEY
Sbjct: 107 LALDVFRGLASLHTIPGGPIIHADIQAKQFLVDSRAGVVKVNDFNRCRFLARDNVTGVPCPVRIPSAPGANRSPEEY 183
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Match: A0A1Z5JLQ6_FISSO (Protein kinase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLQ6_FISSO) HSP 1 Score: 88.6 bits (218), Expect = 6.370e-19 Identity = 43/76 (56.58%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 1 MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMGR-DSEGETCPFKFHKGNGVWRSPEEY 225
+AL AARGL ALHEIPGGP++H DL RQ L+ DG VK+ND NRCRFMG + + C F+ G R+PEEY
Sbjct: 229 LALGAARGLAALHEIPGGPIIHVDLGARQFLVGEDGNVKINDFNRCRFMGYYKTTKQPCDFRIQIAPGTDRAPEEY 304 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig126.1954.1 >prot_F-serratus_M_contig126.1954.1 ID=prot_F-serratus_M_contig126.1954.1|Name=mRNA_F-serratus_M_contig126.1954.1|organism=Fucus serratus male|type=polypeptide|length=79bp MALDAARGLRALHEIPGGPVVHGDLQPRQLLMDGDGTVKLNDLNRCRFMGback to top mRNA from alignment at F-serratus_M_contig126:502098..502334+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig126.1954.1 ID=mRNA_F-serratus_M_contig126.1954.1|Name=mRNA_F-serratus_M_contig126.1954.1|organism=Fucus serratus male|type=mRNA|length=237bp|location=Sequence derived from alignment at F-serratus_M_contig126:502098..502334+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig126:502098..502334+ >mRNA_F-serratus_M_contig126.1954.1 ID=mRNA_F-serratus_M_contig126.1954.1|Name=mRNA_F-serratus_M_contig126.1954.1|organism=Fucus serratus male|type=CDS|length=474bp|location=Sequence derived from alignment at F-serratus_M_contig126:502098..502334+ (Fucus serratus male)back to top |