mRNA_F-serratus_M_contig1245.1863.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1245.1863.1
Unique NamemRNA_F-serratus_M_contig1245.1863.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 2.310e-123
Identity = 205/301 (68.11%), Postives = 227/301 (75.42%), Query Frame = 1
Query:    1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLK-----------------EE-----HQGKKGRPPLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
            VL EFG+K+S+LAGGTTDSG DVKAMCVNFLL  +K  WDWC  HL D+AAE AFGTSADP K KNK AR ++QLVIKAAAKVNQS  FKQKFDE QL+M    LKI KHAPQRWLSLVRVMERIIRLWHVLR+VYANDG EFPLDK +NKD+ILQLYSLL+PL+AITR GQYG VPMSAE HMAFAELK   LDP  PLK                 EE     + GKK   PLPHK V+P+ LRPVA  TR  L KALV++ Y+R WD+E ADPSPFR+A+VLLTPSYKD  F    AL
Sbjct:  303 VLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTPDSPAALQSDEELPVTVNTGKK---PLPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESADPSPFRNASVLLTPSYKDSKFLDGHAL 600          
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 6.280e-111
Identity = 181/294 (61.56%), Postives = 212/294 (72.11%), Query Frame = 1
Query:    1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLK---------------EEHQGKKGRPPLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
            +LAEFGIKLS+LAGGTTDSG D+KAMC NFLL  + +YWDWC  HL D+AAE AFGTSADP KSKNK AR+++ L+IKAAAKVNQS  FKQKFDE Q+EML  TLKI++HAPQRWLSLVRV+ERIIRLWHVLR+                      L+SLLQPL+ ITR GQYG VPM+AE HMAFAELK  +LDPDEPLK                + +  K +  LPHKMV+P+ LRPVA  TR  L K LV++ Y R WD + ADPSPFR+A+VLLTPSYKD +F +A AL
Sbjct:  108 LLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRK----------------------LFSLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKTLVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHAL 379          
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 1.110e-97
Identity = 148/190 (77.89%), Postives = 168/190 (88.42%), Query Frame = 1
Query:    4 LAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKL 573
            LAE+GIKLS+LAGGTTDSG DVKAMCVN LL ++KI+WDWCD HL DK+AEN FGTSADP +SKNK AR +I+LVIK AAK+NQST  KQKF++  LEML+  LKITKHAPQRWLSLV VMERIIRLWHVLR+VYANDG+EFPLDK NN+DDILQLYSLLQPLSAITR GQYG  PM+AE H+AFA+LK+
Sbjct:  285 LAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAITRDGQYGNAPMTAEMHLAFAQLKM 474          
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 3.290e-87
Identity = 146/289 (50.52%), Postives = 192/289 (66.44%), Query Frame = 1
Query:    1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRPP-------LPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
            +L EFG++ S+LA GTTDSG DVK+  VN L   Y + W+WC  HL  KAAE+ FGT  DP KSKN +AR +++ VI     +N+S+ FK KF++ Q+++L   LKI   APQRWL+ VR +ER+IRLWHVLR++Y++ G  FPL++ +NK+ ILQL+SLLQ LS++TR GQYG  PM A+  M F ELK+ VLDP +PLK       G+ G P        LPHKMV+P DL PVA   R++L +ALV R Y R WD    DPS F DA+ LLTP + +     A+ L
Sbjct:   36 ILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKVFDIPPLGQDGLPDREEQKKALPHKMVEPDDLHPVAKKARSKLGRALVSRLYGRVWDHNTLDPSFFCDASCLLTPPFSEGHHLSAMKL 324          
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 6.420e-83
Identity = 147/280 (52.50%), Postives = 181/280 (64.64%), Query Frame = 1
Query:    1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKEEHQ---GKKGRP-------PLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKD 810
            VL EFG+K S+LA GTTDSG DVKA+  N L  +Y + W WC  HL  KAAE A+G   DP KSKN QAR I++ V+K    +N+S  FK KF++ Q++ML    K+ KHAPQRWLSL R +ER IRLWHVLR++Y+++G  FPL++ + KD ILQLYSLLQPLS+ITR GQYG  PM A+  M F  L   VLDP + LK       G+ G P       PLP KMV P  L      TR E+R+ALV RFY R WD+   DP  F  AA LLTP + +
Sbjct:  320 VLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQVPPIGEDGLPDRGQQKKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPPFSE 599          
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 3.350e-81
Identity = 143/289 (49.48%), Postives = 190/289 (65.74%), Query Frame = 1
Query:    1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRP-------PLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
            +L EFG++ S+LA GTTDSG DVK++ VN L   Y + W+WC  HL  KAAE+AFGT  DP  SKN +AR +++ +I     +++S     KF++ Q+++L   L I   APQRWL+LVR MER+IRLW V+R++Y++ G  FPL++ +NKD I QLYSLLQPLS++TR GQYG +PM A+ +M F  LK+GVL+    LK       G+ G P       PLPHKMV   +L PVA   R EL +ALV RFY R WDD   DPS F DAA LLTP + + ++  A+ L
Sbjct:   68 ILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSN-LTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKL 355          
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 3.720e-77
Identity = 140/289 (48.44%), Postives = 187/289 (64.71%), Query Frame = 1
Query:    1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRP-------PLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
            +L EFG + S+LA GTTDSG DVK++ VN L   Y + W+WC  HL  KAAE+AFGT  DP KSKN +A  +++ +I     +++S     KF++ Q+++L   LKI   APQRWL+LVR MER+IRLWHVLR++Y++ G  F L++ +NKD I QLYSLLQ LS++TR GQYG +PM A+ ++ F  LK+GVL+    LK       G+ G P       PL HKMV   +L PVA   R +L +ALV RFY   WDD   DPS F DAA LLTP + + ++  A+ L
Sbjct:   76 ILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKL 364          
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.380e-70
Identity = 132/271 (48.71%), Postives = 175/271 (64.58%), Query Frame = 1
Query:   55 SGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRP-------PLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
            SG DVK++ VN L   Y + W+WC  HL  KAAE+AFGT  DP  SKN +AR +++ +I     +++S     KF++ Q+++L   L I   APQRWL+LVR MER+IRLW V+R++Y++ G  FPL++ +NKD I QLYSLLQPLS++TR GQYG +PM A+ +M F  LK+GVL+    LK       G+ G P       PLPHKMV   +L PVA   R EL +ALV RFY R WDD   DPS F DAA LLTP + + ++  A+ L
Sbjct:  215 SGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSN-LTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKL 484          
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 3.780e-68
Identity = 118/240 (49.17%), Postives = 160/240 (66.67%), Query Frame = 1
Query:    1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLK-------------EEHQGKKGRPPLPHKMVKPSDLRPVA 681
            +L EFG++ S+LA GT DSG DVK++  N L   + + W+WC  HL  KAAE+ FGT  DP KSKN +AR +++ +I     +++S+ FK KFD+ Q+++L   LKI   AP+RWL+LVR +ER+IRLWHVLR++Y++ G  FPL++ +NKD ILQLYSLLQP S++TR GQYG  PM A+ +M    LK+ VLDP E LK             +  + KK    LPHK+V   DLRPVA
Sbjct:   87 ILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGGAPMLADIYMKCGMLKMRVLDPSEELKVFDIPPLGEDSLPDREEQKKA---LPHKVVAHDDLRPVA 323          
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 4.620e-67
Identity = 132/289 (45.67%), Postives = 175/289 (60.55%), Query Frame = 1
Query:    1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRPP-------LPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
            +L EFG++ S+LA GTTDSG DVK++ VN L   + + W+ C  HL  KAAE+ FGT  DP KSKN +AR +++ +I     +++S+ FK KF + Q+++          APQRWL+LV  +ER+IRLWHVLR++Y++ G  FPL++ +  D ILQL SLLQPLS++TR GQYG  PM          LK+ VLDP E LK       G+ G P        LPH MV    L PVA   R EL +AL  RFY R WD    DPS   DAA LLTP + + ++  A+ L
Sbjct:   44 ILHEFGLRPSDLASGTTDSGLDVKSVSVNGLHPQFGVLWNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSVTRDGQYGGAPM----------LKMRVLDPSEELKVFDIPPLGEDGLPDRKEQKKALPHHMVAHDYLDPVAQKERNELCRALGTRFYGRVWDTSTLDPSVLCDAACLLTPPFSEGNYLSAMKL 320          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1G0_9PHAE2.310e-12368.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ46_9PHAE6.280e-11161.56Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JYQ2_9PHAE1.110e-9777.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEE6_9PHAE3.290e-8750.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJJ9_9PHAE6.420e-8352.50Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ66_9PHAE3.350e-8149.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB08_9PHAE3.720e-7748.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0P1_9PHAE1.380e-7048.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8D8_9PHAE3.780e-6849.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT2_9PHAE4.620e-6745.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1245contigF-serratus_M_contig1245:107400..108287 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons2
Model size837
Cds size540
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1245.1863.1prot_F-serratus_M_contig1245.1863.1Fucus serratus malepolypeptideF-serratus_M_contig1245 107697..108287 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929171.4084775-UTR-F-serratus_M_contig1245:107399..1076961622929171.4084775-UTR-F-serratus_M_contig1245:107399..107696Fucus serratus maleUTRF-serratus_M_contig1245 107400..107696 +
1690962735.0236635-UTR-F-serratus_M_contig1245:107399..1076961690962735.0236635-UTR-F-serratus_M_contig1245:107399..107696Fucus serratus maleUTRF-serratus_M_contig1245 107400..107696 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929171.4206438-CDS-F-serratus_M_contig1245:107696..1080021622929171.4206438-CDS-F-serratus_M_contig1245:107696..108002Fucus serratus maleCDSF-serratus_M_contig1245 107697..108002 +
1690962735.0360465-CDS-F-serratus_M_contig1245:107696..1080021690962735.0360465-CDS-F-serratus_M_contig1245:107696..108002Fucus serratus maleCDSF-serratus_M_contig1245 107697..108002 +
1622929171.4316194-CDS-F-serratus_M_contig1245:108053..1082871622929171.4316194-CDS-F-serratus_M_contig1245:108053..108287Fucus serratus maleCDSF-serratus_M_contig1245 108054..108287 +
1690962735.0456452-CDS-F-serratus_M_contig1245:108053..1082871690962735.0456452-CDS-F-serratus_M_contig1245:108053..108287Fucus serratus maleCDSF-serratus_M_contig1245 108054..108287 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1245.1863.1

>prot_F-serratus_M_contig1245.1863.1 ID=prot_F-serratus_M_contig1245.1863.1|Name=mRNA_F-serratus_M_contig1245.1863.1|organism=Fucus serratus male|type=polypeptide|length=180bp
MLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDN
NKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEP
LKEEHQGKKGRPPLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDD
EIADPSPFRDAAVLLTPSYKDYDFHKALAL
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mRNA from alignment at F-serratus_M_contig1245:107400..108287+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1245.1863.1 ID=mRNA_F-serratus_M_contig1245.1863.1|Name=mRNA_F-serratus_M_contig1245.1863.1|organism=Fucus serratus male|type=mRNA|length=888bp|location=Sequence derived from alignment at F-serratus_M_contig1245:107400..108287+ (Fucus serratus male)
GTGCTGGCGGAGTTCGGCATCAAGCTGTCGAACCTCGCTGGCGGAACGAC GGACTCCGGCCCCGACGTCAAGGCGATGTGCGTCAACTTCCTCCTGTTGG TGTACAAGATCTACTGGGATTGGTGCGACAGCCATCTCTGCGACAAGGCT GCCGAGAATGCCTTCGGCACCTCGGCGGACCCCTAGAAGTCGAAGAACAA GCAGGCGCGCAAGATCATCCAACTCGTGATCAAGGCCGCGGCCAAGGTCA ACCAGTCCACCACCTTCAAGCAGAAGTTCGACGAGACCCAGCTGGAGATG CTGAACGCGACCCTGAAGATCACGAAGCACGCGCCACAGCGATGGCTGAG CCTCGTCCGCGTGATGGAGCGGATCATCCGTTTGTGGCACGTCCTCAGGC AGGTCTACGCCAACGATGGCGACGAGTTCCCCCTCGACAAGGACAACAAC AAGGACGACATCCTCCAGCTCTACTCGCTGCTCCAGCCTCTTTCCGCAAT TACGCGGGTCGGCCAGTACGGCACCGTACCGATGTCGGCAGAGAAGCACA TGGCATTCGCAGAGCTCAAGCTGGGCGTGCTTGACCCCGACGAGCCGCTC AAGGTGTTCGACATTCCCGCGTCGCCGGGTTCCCCGGAAGCGGAGAAGGC GGAGGAAGAGCACCAGGGCAAGAAGGGCAGGCCACCGCTGCCGCACAAGA TGGTGAAGCCGAGTGATTTGCGTCCCGTTGCCGTCACGACCCGGGCAGAG CTCCGCAAAGCCCTTGTGCAGAGGTTCTATTCGAGATACTGGGACGATGA GATCGCCGACCCCTCCCCCTTCCGCGACGCCGCCGTGTTGCTGACCCCGT CATACAAGGACTACGACTTCCATAAGGCCCTTGCTTTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1245:107400..108287+

>mRNA_F-serratus_M_contig1245.1863.1 ID=mRNA_F-serratus_M_contig1245.1863.1|Name=mRNA_F-serratus_M_contig1245.1863.1|organism=Fucus serratus male|type=CDS|length=1080bp|location=Sequence derived from alignment at F-serratus_M_contig1245:107400..108287+ (Fucus serratus male)
ATGCTGAACGCGACCCTGAAGATCACGAAGCACGCGCCACAGCGATGGCT
GAGCCTCGTCCGCGTGATGGAGCGGATCATCCGTTTGTGGCACGTCCTCA
GGCAGGTCTACGCCAACGATGGCGACGAGTTCCCCCTCGACAAGGACAAC
AACAAGGACGACATCCTCCAGCTCTACTCGCTGCTCCAGCCTCTTTCCGC
AATTACGCGGGTCGGCCAGTACGGCACCGTACCGATGTCGGCAGAGAAGC
ACATGGCATTCGCAGAGCTCAAGCTGGGCGTGCTTGACCCCGACGAGCCG
CTCAAGATGCTGAACGCGACCCTGAAGATCACGAAGCACGCGCCACAGCG
ATGGCTGAGCCTCGTCCGCGTGATGGAGCGGATCATCCGTTTGTGGCACG
TCCTCAGGCAGGTCTACGCCAACGATGGCGACGAGTTCCCCCTCGACAAG
GACAACAACAAGGACGACATCCTCCAGCTCTACTCGCTGCTCCAGCCTCT
TTCCGCAATTACGCGGGTCGGCCAGTACGGCACCGTACCGATGTCGGCAG
AGAAGCACATGGCATTCGCAGAGCTCAAGCTGGGCGTGCTTGACCCCGAC
GAGCCGCTCAAGGAAGAGCACCAGGGCAAGAAGGGCAGGCCACCGCTGCC
GCACAAGATGGTGAAGCCGAGTGATTTGCGTCCCGTTGCCGTCACGACCC
GGGCAGAGCTCCGCAAAGCCCTTGTGCAGAGGTTCTATTCGAGATACTGG
GACGATGAGATCGCCGACCCCTCCCCCTTCCGCGACGCCGCCGTGTTGCT
GACCCCGTCATACAAGGACTACGACTTCCATAAGGCCCTTGCTTTGGAAG
AGCACCAGGGCAAGAAGGGCAGGCCACCGCTGCCGCACAAGATGGTGAAG
CCGAGTGATTTGCGTCCCGTTGCCGTCACGACCCGGGCAGAGCTCCGCAA
AGCCCTTGTGCAGAGGTTCTATTCGAGATACTGGGACGATGAGATCGCCG
ACCCCTCCCCCTTCCGCGACGCCGCCGTGTTGCTGACCCCGTCATACAAG
GACTACGACTTCCATAAGGCCCTTGCTTTG
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