mRNA_F-serratus_M_contig1245.1863.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 379 bits (972), Expect = 2.310e-123 Identity = 205/301 (68.11%), Postives = 227/301 (75.42%), Query Frame = 1
Query: 1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLK-----------------EE-----HQGKKGRPPLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
VL EFG+K+S+LAGGTTDSG DVKAMCVNFLL +K WDWC HL D+AAE AFGTSADP K KNK AR ++QLVIKAAAKVNQS FKQKFDE QL+M LKI KHAPQRWLSLVRVMERIIRLWHVLR+VYANDG EFPLDK +NKD+ILQLYSLL+PL+AITR GQYG VPMSAE HMAFAELK LDP PLK EE + GKK PLPHK V+P+ LRPVA TR L KALV++ Y+R WD+E ADPSPFR+A+VLLTPSYKD F AL
Sbjct: 303 VLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKVFDIPPTPDSPAALQSDEELPVTVNTGKK---PLPHKTVEPAALRPVATKTRELLGKALVEKLYARLWDEESADPSPFRNASVLLTPSYKDSKFLDGHAL 600
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 342 bits (877), Expect = 6.280e-111 Identity = 181/294 (61.56%), Postives = 212/294 (72.11%), Query Frame = 1
Query: 1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLK---------------EEHQGKKGRPPLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
+LAEFGIKLS+LAGGTTDSG D+KAMC NFLL + +YWDWC HL D+AAE AFGTSADP KSKNK AR+++ L+IKAAAKVNQS FKQKFDE Q+EML TLKI++HAPQRWLSLVRV+ERIIRLWHVLR+ L+SLLQPL+ ITR GQYG VPM+AE HMAFAELK +LDPDEPLK + + K + LPHKMV+P+ LRPVA TR L K LV++ Y R WD + ADPSPFR+A+VLLTPSYKD +F +A AL
Sbjct: 108 LLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRK----------------------LFSLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLKVFDIPATPVSPEAEQADEEVPKKKKSLPHKMVEPAALRPVATKTRELLTKTLVEKLYRRVWDQDSADPSPFRNASVLLTPSYKDTNFLQAHAL 379
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE) HSP 1 Score: 303 bits (777), Expect = 1.110e-97 Identity = 148/190 (77.89%), Postives = 168/190 (88.42%), Query Frame = 1
Query: 4 LAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKL 573
LAE+GIKLS+LAGGTTDSG DVKAMCVN LL ++KI+WDWCD HL DK+AEN FGTSADP +SKNK AR +I+LVIK AAK+NQST KQKF++ LEML+ LKITKHAPQRWLSLV VMERIIRLWHVLR+VYANDG+EFPLDK NN+DDILQLYSLLQPLSAITR GQYG PM+AE H+AFA+LK+
Sbjct: 285 LAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAITRDGQYGNAPMTAEMHLAFAQLKM 474
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 277 bits (708), Expect = 3.290e-87 Identity = 146/289 (50.52%), Postives = 192/289 (66.44%), Query Frame = 1
Query: 1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRPP-------LPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
+L EFG++ S+LA GTTDSG DVK+ VN L Y + W+WC HL KAAE+ FGT DP KSKN +AR +++ VI +N+S+ FK KF++ Q+++L LKI APQRWL+ VR +ER+IRLWHVLR++Y++ G FPL++ +NK+ ILQL+SLLQ LS++TR GQYG PM A+ M F ELK+ VLDP +PLK G+ G P LPHKMV+P DL PVA R++L +ALV R Y R WD DPS F DA+ LLTP + + A+ L
Sbjct: 36 ILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKVFDIPPLGQDGLPDREEQKKALPHKMVEPDDLHPVAKKARSKLGRALVSRLYGRVWDHNTLDPSFFCDASCLLTPPFSEGHHLSAMKL 324
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 275 bits (703), Expect = 6.420e-83 Identity = 147/280 (52.50%), Postives = 181/280 (64.64%), Query Frame = 1
Query: 1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKEEHQ---GKKGRP-------PLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKD 810
VL EFG+K S+LA GTTDSG DVKA+ N L +Y + W WC HL KAAE A+G DP KSKN QAR I++ V+K +N+S FK KF++ Q++ML K+ KHAPQRWLSL R +ER IRLWHVLR++Y+++G FPL++ + KD ILQLYSLLQPLS+ITR GQYG PM A+ M F L VLDP + LK G+ G P PLP KMV P L TR E+R+ALV RFY R WD+ DP F AA LLTP + +
Sbjct: 320 VLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKVFQVPPIGEDGLPDRGQQKKPLPFKMVPPEQLHAAVEKTRVEMRRALVSRFYGRVWDENTLDPPFFCHAACLLTPPFSE 599
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 261 bits (667), Expect = 3.350e-81 Identity = 143/289 (49.48%), Postives = 190/289 (65.74%), Query Frame = 1
Query: 1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRP-------PLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
+L EFG++ S+LA GTTDSG DVK++ VN L Y + W+WC HL KAAE+AFGT DP SKN +AR +++ +I +++S KF++ Q+++L L I APQRWL+LVR MER+IRLW V+R++Y++ G FPL++ +NKD I QLYSLLQPLS++TR GQYG +PM A+ +M F LK+GVL+ LK G+ G P PLPHKMV +L PVA R EL +ALV RFY R WDD DPS F DAA LLTP + + ++ A+ L
Sbjct: 68 ILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSN-LTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKL 355
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 254 bits (650), Expect = 3.720e-77 Identity = 140/289 (48.44%), Postives = 187/289 (64.71%), Query Frame = 1
Query: 1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRP-------PLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
+L EFG + S+LA GTTDSG DVK++ VN L Y + W+WC HL KAAE+AFGT DP KSKN +A +++ +I +++S KF++ Q+++L LKI APQRWL+LVR MER+IRLWHVLR++Y++ G F L++ +NKD I QLYSLLQ LS++TR GQYG +PM A+ ++ F LK+GVL+ LK G+ G P PL HKMV +L PVA R +L +ALV RFY WDD DPS F DAA LLTP + + ++ A+ L
Sbjct: 76 ILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDRKEQKKPLRHKMVAHDELHPVAQKARDKLCRALVSRFYGHVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKL 364
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.380e-70 Identity = 132/271 (48.71%), Postives = 175/271 (64.58%), Query Frame = 1
Query: 55 SGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRP-------PLPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
SG DVK++ VN L Y + W+WC HL KAAE+AFGT DP SKN +AR +++ +I +++S KF++ Q+++L L I APQRWL+LVR MER+IRLW V+R++Y++ G FPL++ +NKD I QLYSLLQPLS++TR GQYG +PM A+ +M F LK+GVL+ LK G+ G P PLPHKMV +L PVA R EL +ALV RFY R WDD DPS F DAA LLTP + + ++ A+ L
Sbjct: 215 SGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSN-LTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKVFDIPPLGEDGLPDREEQKKPLPHKMVAHDELHPVAQKARNELCRALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKL 484
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE) HSP 1 Score: 223 bits (569), Expect = 3.780e-68 Identity = 118/240 (49.17%), Postives = 160/240 (66.67%), Query Frame = 1
Query: 1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLK-------------EEHQGKKGRPPLPHKMVKPSDLRPVA 681
+L EFG++ S+LA GT DSG DVK++ N L + + W+WC HL KAAE+ FGT DP KSKN +AR +++ +I +++S+ FK KFD+ Q+++L LKI AP+RWL+LVR +ER+IRLWHVLR++Y++ G FPL++ +NKD ILQLYSLLQP S++TR GQYG PM A+ +M LK+ VLDP E LK + + KK LPHK+V DLRPVA
Sbjct: 87 ILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGGAPMLADIYMKCGMLKMRVLDPSEELKVFDIPPLGEDSLPDREEQKKA---LPHKVVAHDDLRPVA 323
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Match: A0A6H5JTT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT2_9PHAE) HSP 1 Score: 221 bits (564), Expect = 4.620e-67 Identity = 132/289 (45.67%), Postives = 175/289 (60.55%), Query Frame = 1
Query: 1 VLAEFGIKLSNLAGGTTDSGPDVKAMCVNFLLLVYKIYWDWCDSHLCDKAAENAFGTSADP*KSKNKQARKIIQLVIKAAAKVNQSTTFKQKFDETQLEMLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNNKDDILQLYSLLQPLSAITRVGQYGTVPMSAEKHMAFAELKLGVLDPDEPLKE---EHQGKKGRPP-------LPHKMVKPSDLRPVAVTTRAELRKALVQRFYSRYWDDEIADPSPFRDAAVLLTPSYKDYDFHKALAL 837
+L EFG++ S+LA GTTDSG DVK++ VN L + + W+ C HL KAAE+ FGT DP KSKN +AR +++ +I +++S+ FK KF + Q+++ APQRWL+LV +ER+IRLWHVLR++Y++ G FPL++ + D ILQL SLLQPLS++TR GQYG PM LK+ VLDP E LK G+ G P LPH MV L PVA R EL +AL RFY R WD DPS DAA LLTP + + ++ A+ L
Sbjct: 44 ILHEFGLRPSDLASGTTDSGLDVKSVSVNGLHPQFGVLWNCCFYHLMVKAAEDGFGTHVDPQKSKNPKARDMLKKLINLVGTLHRSSNFKAKFGDLQVDVWGEVFP--NQAPQRWLTLVPTLERVIRLWHVLRKLYSDTGKTFPLEEGDITDCILQLNSLLQPLSSVTRDGQYGGAPM----------LKMRVLDPSEELKVFDIPPLGEDGLPDRKEQKKALPHHMVAHDYLDPVAQKERNELCRALGTRFYGRVWDTSTLDPSVLCDAACLLTPPFSEGNYLSAMKL 320 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1245.1863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1245.1863.1 >prot_F-serratus_M_contig1245.1863.1 ID=prot_F-serratus_M_contig1245.1863.1|Name=mRNA_F-serratus_M_contig1245.1863.1|organism=Fucus serratus male|type=polypeptide|length=180bp MLNATLKITKHAPQRWLSLVRVMERIIRLWHVLRQVYANDGDEFPLDKDNback to top mRNA from alignment at F-serratus_M_contig1245:107400..108287+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1245.1863.1 ID=mRNA_F-serratus_M_contig1245.1863.1|Name=mRNA_F-serratus_M_contig1245.1863.1|organism=Fucus serratus male|type=mRNA|length=888bp|location=Sequence derived from alignment at F-serratus_M_contig1245:107400..108287+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1245:107400..108287+ >mRNA_F-serratus_M_contig1245.1863.1 ID=mRNA_F-serratus_M_contig1245.1863.1|Name=mRNA_F-serratus_M_contig1245.1863.1|organism=Fucus serratus male|type=CDS|length=1080bp|location=Sequence derived from alignment at F-serratus_M_contig1245:107400..108287+ (Fucus serratus male)back to top |