mRNA_F-serratus_M_contig1237.1795.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 423 bits (1088), Expect = 1.400e-132 Identity = 209/420 (49.76%), Postives = 292/420 (69.52%), Query Frame = 1
Query: 31 PIASRSYRYNPVVAREVDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDEASMVDYIERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
P+ SR YR NP VA++VD+I+++ L A +I+ S SPY++P+VV+ KK+G +RI +YR+LN+ + Q PI R D+ LD L ++S FDM S FHQI + +++PL AF T+SGL+E+L +P G+S +PG F +V+ +V +L H V Y+DD++V ++ AS VD + + L H+LK++ K+ +GA E +F+GHTISP GV+P+ +V AL K+ MP +V +LRS LGGLSYYRKFLPN++ ++P+T LLKK F FT ME +R +L PPVLV+PD++A DGSR FRLYCDAS GFG TLEQ Q + SIRPIV++SR L +E+ W P++ +AG IVW+IKRLR Y++ F +TDH L +V N RVQRW+EFLTAYNY + KG+A+GN D L
Sbjct: 272 PVTSRPYRVNPPVAKQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEVIKNL-HGVASYLDDLIVFDDNPASHVDTMRALFERLRTHNLKLTPPKATVGATEADFLGHTISP-DGVRPNGAKVAALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMATRIRPLTTLLKKQATFVFTLAMEQAVRILLSELANPPVLVYPDWDAVSDGSRPFRLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEAGSIVWSIKRLRGYLWGTKFRIFTDHKSLEHFAKVGENNARVQRWLEFLTAYNYTLEYRKGSANGNADFL 689
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5JFL9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL9_9PHAE) HSP 1 Score: 397 bits (1021), Expect = 1.670e-127 Identity = 202/420 (48.10%), Postives = 282/420 (67.14%), Query Frame = 1
Query: 31 PIASRSYRYNPVVAREVDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDEASMVDYIERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
P+ SR YR NP VA++VD+I+++ L A +I+ S SPY++P+VV+ KK+G +RI +YR+LN+ + Q PI R D+ LD L ++S FDM S FHQI + +++PL AF T+S L+E+L +P G+S +PG F +V+ +V +L H V Y+DD++V + A+ V + + L H+LK++ K+ IGA E +F+GHTISP GV+P+ +V AL K+ MP +V +LRS LGGLSYYRKFLP ++K ++ +T LLKK F FT ME +R +L PPVLV+PD++A DGSR F LYCDAS GFG TLEQ Q + SIRPIV++SR L +E+ W P++ +A IVW IKRLR Y++ F TDH L +V N RVQRW+EFLTAY+ KG+A+GN D L
Sbjct: 167 PVTSRPYRVNPPVAKQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSELFEWLKMPQGSSAAPGWFCKVVNEVIKNL-HGVASYLDDLIVFDDTPATHVGTMRALFERLRTHNLKLTPPKATIGATEADFLGHTISP-DGVRPNGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPFMAKRIRYLTTLLKKQEKFIFTPSMEQAVRVLLAELANPPVLVYPDWDAVSDGSRPFHLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEASSIVWCIKRLRGYLWGTKFRILTDHKSLEHFAKVGENNARVQRWLEFLTAYSCTLECRKGSANGNADFL 584
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5JJR1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR1_9PHAE) HSP 1 Score: 391 bits (1005), Expect = 2.350e-127 Identity = 201/420 (47.86%), Postives = 281/420 (66.90%), Query Frame = 1
Query: 31 PIASRSYRYNPVVAREVDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDEASMVDYIERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
P+ SR YR NP VA+ VD+I+++ L A +I+ S SPY++P+VV+ KK+G +RI +YR+LN+ + Q PI R D+ LD L ++S FD+ S FHQI + +++PL AF T+SGL+E+L +P G+S +PG F +V+ + + Y+DD++V +D A+ V + L H+LK++ K+ IGA E +F+GHTISP GV+P+ +V AL K+ MP +V +LRS LGGLSYYRKFLPN++K ++P+T LLKK F FT ME +R +L PPVL +PD++A DGSR LYCDAS GFGATLEQ Q ++SIRPIV++SR L +E+ W P++ +AG IVW IKRLR Y++ TDH L +V N VQRW+EFLTAYNY + KG+A+GN D L
Sbjct: 29 PVTSRPYRVNPPVAKIVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDIKSSFHQITV-HDTIPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEAS---------YLDDLIVF-DDAATHVGTMRALFDCLRTHNLKLTPPKATIGATEADFLGHTISP-DGVRPNGAKVSALTKMPMPRDVEQLRSLLGGLSYYRKFLPNMAKRIRPLTTLLKKQEKFIFTPSMEQAVRVLLAELANPPVLDYPDWDAVSDGSRPLHLYCDASRDGFGATLEQEQPDSSIRPIVFISRATLDSERHWTPLDLEAGSIVWCIKRLRGYLWGTKCRIITDHKSLEHFAKVGENNAHVQRWLEFLTAYNYTLENRKGSANGNADFL 436
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5JUV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV3_9PHAE) HSP 1 Score: 375 bits (963), Expect = 8.670e-123 Identity = 191/413 (46.25%), Postives = 271/413 (65.62%), Query Frame = 1
Query: 52 RYNPVVAREVDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDEASMVDYIERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
++ VA++V++I ++ L A +I+ S SPY++P+V++ KK+G + I +YR+LN+ + Q PI R D+ LD L ++S FDM S FHQI + +++PL AF T+S L+E+L +P G+S +PG F +V+ +V +L H V Y+DD++V + + V + + L H+LK++ ++ IGA E +F+ HTISP GV P +V AL K+ MP +V +LRS LGGLSYYRKFLPN++K ++P+T LLKK F FT ME +R + PPVLV+PD++A DGSR F LYCDAS GFG TLEQ Q + SIRPIV +SR L +E+ W P + +AG IVW IK LR Y++ F +TDH PL + N RVQ W+EFLTAYNY + KG+A+GN D L
Sbjct: 61 KFGREVAKQVEAIHDQYLAAGLIQHSTSPYSSPLVIIPKKSGGVCITVNYRKLNKLCALGQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSELFEWLKMPQGSSAAPGRFCKVVNEVIKNL-HDVASYLDDLIVFDDTLPTHVGTMRTLFERLRTHNLKLTPPQATIGATEADFLRHTISP-DGVGPTGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMAKRIRPLTTLLKKQEKFIFTPSMEQAVRVLFAELANPPVLVYPDWDAVSDGSRPFHLYCDASHDGFGGTLEQEQPDGSIRPIVSISRATLDSERHWTPHDLEAGSIVWCIKCLRGYLWGTKFRIFTDHKPLEHFAKAGENNARVQGWLEFLTAYNYTLEYRKGSANGNADFL 471
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5L6E5_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E5_9PHAE) HSP 1 Score: 367 bits (943), Expect = 4.650e-120 Identity = 192/420 (45.71%), Postives = 265/420 (63.10%), Query Frame = 1
Query: 31 PIASRSYRYNPVVAREVDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDEASMVDYIERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
P+ SR YR NP VA++VD+I+++ L A +I+ S SPY++P+VV+ KK+GS+RI +YR+LN+ Q PI R D+ LD L ++S FDM S FHQI + +++PL AF T SGL++ H R V Y+DD++V + + V + L H+LK + K+ IGA E +F+GHTISP GV+P+ +V AL K+ MP +V +LRS LGGL+YY KFLPN++K ++P+T LLKK F FT ME + +L PPVLV+PD++A DGSR F L+CDAS GFG TLEQ Q + S+RPIV++SR L +E+ W P++ +AG IVW IKRLR Y++ F +TDH L +V N RVQRW+EFLTA NY + KG+A+GN D L
Sbjct: 74 PVTSRPYRVNPPVAKQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGSVRITVNYRKLNKLFAFSQPPIPRVDDTLDNLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTCSGLFD-------------HQLRG-----------VASYLDDLIVFDDTPTTHVGTMRALFDCLRTHNLKFTPPKATIGATEEDFLGHTISP-DGVRPNGAKVSALTKMPMPRDVKQLRSLLGGLNYYPKFLPNMAKHIRPLTTLLKKQEKFIFTPSMEQAVCVLLAELANPPVLVYPDWDAVSDGSRPFHLHCDASRDGFGGTLEQEQPDGSLRPIVFISRATLDSERHWTPLDLEAGSIVWCIKRLRGYLWGTKFRIFTDHKSLEHFAKVGENNARVQRWLEFLTADNYTLEYRKGSANGNADFL 468
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5JP96_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP96_9PHAE) HSP 1 Score: 370 bits (951), Expect = 4.970e-120 Identity = 189/404 (46.78%), Postives = 274/404 (67.82%), Query Frame = 1
Query: 79 VDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDEASMVDYIERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
VD+I+++ L A +I+ S SP ++P+VV+ KK+G +RI +YR+LN+ + Q PI R D+ L L+ ++S FDM S FHQI + +++PL AF T+SGL+E+L +P G++ +PG + +V+ +V +L V Y+DD++V A+ V I + L H+LK++ + IGA E F+GHTISP GV+P+ ++V AL K+ MP + +LR+ LGGLS YRKFLP ++K ++P+T LLKK+V F FT ME+ +R++L PPVLV+PD++A DGSR FRLY DAS GFG TLEQ Q + S+RPIV+ SR L +E+ W P++ +AG IVW IKRLR Y++ F +TDH L L +V N RVQRW+EFLTAY+Y + KG+++GN D L
Sbjct: 4 VDAILDQYLAAGLIQHSTSPCSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPILRVDDTLKLLKG-EIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSAAAPGWYCKVVNEVIKNLRG-VASYLDDLIVFDATLAAHVATIRSLFERLRTHNLKLTPPNATIGATEAEFLGHTISP-DGVRPNGDKVIALTKMPMPIDTKQLRALLGGLSNYRKFLPQMAKRVRPLTTLLKKNVKFEFTDSMESAVRQLLAELASPPVLVYPDWDAVSDGSRPFRLYYDASKDGFGGTLEQEQPDGSVRPIVFDSRATLESERHWTPLDLEAGSIVWCIKRLRGYLWGTHFKIFTDHKSLEHLAKVGETNARVQRWLEFLTAYSYTLEYRKGSSNGNADFL 404
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5K248_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K248_9PHAE) HSP 1 Score: 371 bits (953), Expect = 3.930e-119 Identity = 190/423 (44.92%), Postives = 276/423 (65.25%), Query Frame = 1
Query: 64 VVAREVDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDEASMVDY--------------IERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
+ ++VD+I+++ L A +I+ S SPY+ P+VV+ KK+G +RI + R+LN+ + Q PI R D+ L L ++S FDM S FHQI + +++PL AF T+SGL+E+L +P G++ +PG F +V+ +V +L V Y+DD++V A+ V I + L H+LK++ K+ IGA E F+GHTISP GV+P+ ++V AL K+ MPN+ +LR+ LGGL+YYRKFLP ++K ++P+T LLKKDV F F ME+ +R++L PPVLV+PD++A DGSR FRLY DAS GFG TLEQ Q + S+RPIV++SR L +E+ W P++ +AG IVW IK LR Y++ F +T H L L +V N RVQRW+EFLTAY+Y + KG+++GN D L
Sbjct: 184 IALQKVDAILDQYLAAGLIQHSTSPYSIPLVVIPKKSGGLRITVNNRKLNKLCALSQLPIPRVDDTLAKLLKGKIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSAAAPGWFCKVVNEVIRNLRG-VASYLDDLIVFDETPAAHVAXSGQCCCPRMVLQATIRSLFERLRTHNLKLTPSKATIGATEAEFLGHTISP-DGVRPNGDKVIALTKMPMPNDTKQLRALLGGLTYYRKFLPQMAKRVRPLTTLLKKDVKFEFMDSMESAVRQLLAELASPPVLVYPDWDAVSDGSRPFRLYYDASKDGFGGTLEQEQPDGSVRPIVFVSRATLESERHWTPLDIEAGSIVWCIKHLRGYLWGTYFKIFTYHKSLEHLAKVGETNARVQRWLEFLTAYSYTLEYRKGSSNGNADFL 604
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5KPN8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN8_9PHAE) HSP 1 Score: 380 bits (977), Expect = 1.070e-117 Identity = 195/422 (46.21%), Postives = 283/422 (67.06%), Query Frame = 1
Query: 31 PIASRSYRYNPVVAREVDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDE--ASMVDYIERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
P+ASR YR NP++ + VD+++++ L A +I+ S SP+A+P+V + KK+GS+RI +Y+RL + P+ R D +LD+L + +FS FD+ S FHQI+ E++VPL AFCT + L+E+L +P G + SP F +V+ +V L V Y+DDV +C ++E +++ IE FK+ L +++LK+S K+ +GA NF+GHTISP GV PD +V AL + P NV +LRS LGGLSYYRKFL NL+ ++P+ LLK+ V F++T M V++ +L +PP+LV PD+ A D SR FRL DA GFGA+LEQ Q N S+RPIVY+SR LP E++W ++ +AG IVW IKRLR Y++L F Y+DH L S+ +V N RVQRW+EFL+ + Y + KG+A+GN D +
Sbjct: 755 PVASRPYRINPLMQKNVDAVLDQYLAAGLIQHSTSPWASPLVAIPKKDGSVRITVNYKRLKALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLER-VLAYLDDV-ICFDEEPLGHVLNLIEFFKR-LRQYNLKLSAGKARVGATHANFLGHTISP-AGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVMVVKTLLSELARPPILVFPDWAAIEDNSRPFRLCSDACIDGFGASLEQEQLNGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWLTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADNI 1172
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5L5E4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E4_9PHAE) HSP 1 Score: 373 bits (957), Expect = 8.550e-117 Identity = 194/422 (45.97%), Postives = 282/422 (66.82%), Query Frame = 1
Query: 31 PIASRSYRYNPVVAREVDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDE--ASMVDYIERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
P+ASR YR NP++ +VD+++++ L A +I+ S SP+A+P+VV+ KK+GS+RI +Y+RLN + P+ R D +LD+L + +FS FD+ S FHQI+ E++VPL AFCT + L+E+L + G + SP F +V+ +V L V Y+DDV +C ++E +++ IE FK+ L +++LK+S K+ +GA NF+GHTISP GV PD +V AL + P NV +LRS LGGLSYYRKFL NL+ ++P+ LLK+ V F++T M V++ +L +PP+LV PD+ A D SR RL DA GFGA+LEQ Q + S+RPIVY+SR LP E++W ++ +AG IVW IKRLR Y++ F Y+DH L S+ +V N RVQRW+EFL+ + Y + KG+A+GN D L
Sbjct: 57 PVASRPYRINPLMQNKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMLQGANASPSWFVKVINRVVHGLER-VLAYLDDV-ICFDEEPLGHVLNLIEFFKR-LRQYNLKLSPGKARVGATHANFLGHTISP-AGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVKTLLSELARPPILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFL 474
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Match: A0A6H5J8H9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H9_9PHAE) HSP 1 Score: 357 bits (915), Expect = 8.390e-116 Identity = 182/416 (43.75%), Postives = 269/416 (64.66%), Query Frame = 1
Query: 43 RSYRYNPVVAREVDSIIEKCLKACIIRRSQSPYAAPIVVVLKKNGSIRIICDYRRLNEATVIPQTPISRTDELLDTLESASLFSSFDMMSGFHQIMIGENSVPLKAFCTASGLYEFLVIPMGTSGSPGHFQRVMQQVTADLAHFVTIYIDDVLVCSNDEASMVDYIERFKKALTKHSLKVSLDKSEIGAEEINFMGHTISPRGGVKPDANRVDALRKLTMPNNVTELRSFLGGLSYYRKFLPNLSKTLQPITKLLKKDVAFRFTAEMETVIREMLRVRTKPPVLVHPDFEAARDGSRKFRLYCDASAAGFGATLEQPQKNNSIRPIVYLSRTVLPNEQDWAPVEEKAGCIVWTIKRLRQYVFLIPFGTYTDHSPLISLLRVEAINTRVQRWVEFLTAYNYRTIHGKGAAHGNTDTL 1290
R NP+V ++VD+I+++ L +I++SQSP+A+P+VV+ KK+G++R+ +Y+ L + + Q P R D ++D+L +FS FD+ S FHQI + E++V L AFCT + L+E+L +P G+S +P F V+ +V H V Y+DDV+V D V F L K++LK+S KS +GA+E ++GHTISP GV P A++V+AL K+ +PNNV +LR L GLSYYRKF+ L+ ++P+T LL+KD F +T M + E+L ++PPVL PD++A DGSR L CDA GFGA LEQ Q + S+RPI+++SR L +E++W ++ +AG IVW IKRLR Y + F Y+DH L S+++V N RVQRW+EFL + NY ++ G A+ N D L
Sbjct: 3 RRLALNPLVEKKVDAILDQYLAVGLIQQSQSPWASPLVVMPKKDGNLRLTVNYKTLKKLCSLGQQPQPRVDHIIDSLHKGKVFSIFDLNSAFHQITVEEDTVQLTAFCTPTQLFEWLRMPQGSSVAPSWFTMVINEVVKGPDH-VLAYLDDVIVFDADPVHHVANTRLFLGRLGKYNLKLSPLKSRVGAKEAVYLGHTISP-AGVSPRADKVEALIKMPLPNNVKQLRFLLAGLSYYRKFIKGLAVRVKPLTDLLRKDAKFCYTPAMADTVEELLAKLSEPPVLAFPDWDAVADGSRSLWLCCDACVDGFGAALEQAQADGSVRPILFVSRATLESERNWTVLDLEAGSIVWAIKRLRGYFWPTHFLIYSDHKALESIVKVGEHNARVQRWLEFLFSSNYTLVYRNGTANANADFL 416 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1237.1795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1237.1795.1 >prot_F-serratus_M_contig1237.1795.1 ID=prot_F-serratus_M_contig1237.1795.1|Name=mRNA_F-serratus_M_contig1237.1795.1|organism=Fucus serratus male|type=polypeptide|length=431bp EIKLKEDVKTPIASRSYRYNPVVAREVDSIIEKCLKACIIRRSQSPYAAPback to top mRNA from alignment at F-serratus_M_contig1237:253726..255018- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1237.1795.1 ID=mRNA_F-serratus_M_contig1237.1795.1|Name=mRNA_F-serratus_M_contig1237.1795.1|organism=Fucus serratus male|type=mRNA|length=1293bp|location=Sequence derived from alignment at F-serratus_M_contig1237:253726..255018- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1237:253726..255018- >mRNA_F-serratus_M_contig1237.1795.1 ID=mRNA_F-serratus_M_contig1237.1795.1|Name=mRNA_F-serratus_M_contig1237.1795.1|organism=Fucus serratus male|type=CDS|length=2586bp|location=Sequence derived from alignment at F-serratus_M_contig1237:253726..255018- (Fucus serratus male)back to top |