mRNA_F-serratus_M_contig1227.1734.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: D7FMK9_ECTSI (UV excision repair protein RAD23B homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK9_ECTSI) HSP 1 Score: 444 bits (1143), Expect = 1.270e-145 Identity = 314/508 (61.81%), Postives = 355/508 (69.88%), Query Frame = 2
Query: 32 MVKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIP---NPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPE----PATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMGGADIMPAFQAPAAVPAPTPAAXXXXXXXXXXXXXXXXXXATADATNPPADTPAXAAPSANPGDXXXXXXXXAQEGGDEDEDMYG 1534
MVK+TVKTIKG+KF+IEVE+T+TVR+ KGVIE NAEFPAAQLKLIHSG+ILKD+ TL E KIKE++FLVCMVTKP XXXXXXXXXXXXXXXX T A P N +HV QLT+MGFPEDQ AALRAAMGNPDVAVEFLMTGIP+ A PA A+AAP GA METL+DFRGHPQFN+LKRLVQRDP LS +LQMIG+QSP LL+RIHENQG+FIALMNEP++ES PPA AA XXX G MMG+GGQA NPAQ+AQ+LQ ++PAQR QMAA M EQ QQLMG +NAGGMPG G+GG+ PPGA G GGNVIRL+EEEGAAVARL+ELGF+RTDAAQAYLACDKNEALAAN L++ MG A + PAFQAPA VPAP AA XXXXXXXX + AT PAD P+ A ++P + Q GGDEDEDMYG
Sbjct: 1 MVKLTVKTIKGKKFQIEVEQTQTVREVKGVIEEQNAEFPAAQLKLIHSGQILKDECTLAEYKIKEEEFLVCMVTKPX-------------------------XXXXXXXXXXXXXXXXXXTAAAAPAAAPAXXXXXXXXNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQAAAAPAQ-AAAAPTGA-----METLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINESAPPAAAAGNAXXXXX--FGPMMGSGGQANNPAQVAQLLQGMSPAQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGI---PPGAGGAGGNVIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMG-AGMPPAFQAPAPVPAPPTAATPATXXXXXXXXSDSTAPS---ATENPAD-PSPATGESSPTNPSAGGNNP-QGGGDEDEDMYG 466
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO) HSP 1 Score: 283 bits (723), Expect = 7.020e-84 Identity = 217/422 (51.42%), Postives = 262/422 (62.09%), Query Frame = 2
Query: 35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPK-PAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPA--SAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVD---ESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMG 1282
+K+TVKT+KG KF +EVE+T TV++ K IE E A+ LKLIHSGK+LKD+ T+ C IK +DFLV MVTK K PAATP XXXXXXXXXXXXXXXXXXXXXX P + E V LT MGFPE + LRAA GNPDVAVEFL GIP+ + A A S++ A T+P++ L R HPQFN+L+RLVQ +P ML VL IGQQ P LL I+ +Q F+ +MNEPV S P A A G+G M G NPAQMAQM+Q+++PA+ QMA MMG+S QL + + QMPPEQLQQ M + G G GG + V+RLTEEE AAV RL+E+GFDR++AAQA+LACDKNEALAANLLMD MG
Sbjct: 1 MKLTVKTLKGAKFDVEVEETHTVQEAKSAIEKEKPELVASTLKLIHSGKVLKDEDTIASCGIKPNDFLVVMVTKAKKPAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----PTRTDTFSQEAVDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNGIPDAVSAAMNATESSSATPAQATQPLQAL---RNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINSHQALFLEMMNEPVTAAPSSAPTGSRAPTASSESASGMGMPMEGMG---NPAQMAQMIQSMSPAELDQMAQMMGLSSDQLRMTAQMLGQMPPEQLQQFMAHMGGGE----GHGGQQ------------VLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMG 396
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A6T7K158_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7K158_9STRA) HSP 1 Score: 283 bits (723), Expect = 7.230e-84 Identity = 214/421 (50.83%), Postives = 263/421 (62.47%), Query Frame = 2
Query: 35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPA-----GGL--GSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDG 1276
+++TVKT+KG KF ++ + TV D KG+IEA +E PAA +KLIHSGK+LKD ++E C IK DFLV M+TK K AA XXXXXXXXXXXXXXXXXXXXXX T P P E ++ LT MGFPE +A A LRAA GNPD+AVEFLM GIP PA A A+A +S P+ L R HPQF+ L+RLVQ +P L VL IGQQ P LL I+ NQ +F+ +MNEP+ A + PA GG+ G M G G NPAQMAQMLQ+++P + +MA+MM +SP+QL + ISQMPPEQ Q+ M G G G+ GM G+ ++RLTE+E AAV RL+E+GFDR DAAQA+LACDKNEALAANLLMDG
Sbjct: 1 MQLTVKTLKGGKFTVDAAPSSTVADVKGLIEAAKSELPAATMKLIHSGKVLKDADSIESCNIKPTDFLVVMITKAKKAAXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXATEPAVAAPPADDFPA---EVINNLTGMGFPEAEARACLRAASGNPDIAVEFLMNGIP-PAVQAQQAAATTGSSSSGEPLAAL---RSHPQFDALRRLVQSNPQTLQAVLTQIGQQQPELLREINANQAQFLEMMNEPIAVDPAAAPSVAPTVSSPAAPTGTGGMPAGLMEGMG----NPAQMAQMLQSMSPNELNEMASMMNLSPEQLTATAQMISQMPPEQFQEYMMQAMQQGGGGMGMPGMMXXXXXXGGSQPQMLRLTEDEMAAVDRLTEMGFDRADAAQAFLACDKNEALAANLLMDG 400
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: B7FSN5_PHATC (RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSN5_PHATC) HSP 1 Score: 281 bits (720), Expect = 2.290e-83 Identity = 206/436 (47.25%), Postives = 251/436 (57.57%), Query Frame = 2
Query: 35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPK------PAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPA----------SPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSM-MGAGGQAP---NPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMG 1282
+K+ VKT+KGEKF I E+++TV D KG+IEAT +E A LKLIHSGK+LKD+ ++ IKE+DFLV MVTK K PAATP P A P P AA XXXXXXXXXXXX P + E V+ LT MGFPE + LRAA GNPD+AVEFL GIPE A SP++++ + +P++ L R HPQFNDL+RLVQ +P ML VL IGQQ P LL I+ NQ F+ +MNEPV+ S + A A LG + GA NPAQMAQM+Q ++P + QMAAMM PPEQL Q M GG +GG + V+RLTEEE AAV RL+E+GFDR++AAQA+LACDKNEALAANLLMD MG
Sbjct: 1 MKLLVKTLKGEKFEIHAEESQTVADVKGIIEATKSELSAGTLKLIHSGKVLKDEDSIASAGIKENDFLVVMVTKAKKPVAAKPAATPTPVPAATPGPPVAAAASIEXXXXXXXXXXXX----------------PTRADDVSAEAVANLTSMGFPEAEVKHCLRAAHGNPDIAVEFLTNGIPEGVAEAAAAMNTSAVTSPSASSESSSGSGQPLQAL---RNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPQLLQEINANQALFLQIMNEPVESSASVSAAPAVSGSSDAPSLGGLDSGAAAMMEGMGNPAQMAQMIQGMSPEELNQMAAMMXXXXXXXXXXXXXXXXXPPEQLSQFMMQAMGGGEGPESMGGSQ------------VLRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLLMDSMG 405
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A7S3P0B9_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P0B9_9STRA) HSP 1 Score: 270 bits (690), Expect = 1.720e-78 Identity = 224/456 (49.12%), Postives = 263/456 (57.68%), Query Frame = 2
Query: 35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAA-TPAPSAAVVP---------------------APTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPASAA-------PLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXX------PAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGM----PPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMGG 1285
+K+TVKT+ G KF IE + + TV KG+IEA NAE PAA +KLIHSGK+LKD+ L IKE+DFLV M+TK K A TPAP A T A XXXXXXXXXXXXXXXXXXXXXX P + V L MGFPE+ +R A GNPD+AVEFL GIPE A A+AA G + + + L R HPQFNDL+RLVQ +P ML VL IGQQ P LL I+ NQ F+ +MNEP+ E + XXXXXX PAGG G G NP QMAQM+Q++NP + QMA MMGVS +QL + I QMPPEQL Q + GGG GGM M G V+RLT+EE AAV RL+E+GFDR +AAQA+LACDKNEALAANLLMD M G
Sbjct: 1 MKVTVKTLTGRKFPIEADDSSTVAAVKGIIEAANAELPAASMKLIHSGKVLKDEDILSTVGIKENDFLVVMITKKKAAPKTPAPQXXXXXXXXXXXXXXXXXXXXXXXXXAASTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAISDAAVENLVGMGFPEEAVRHCMRVAQGNPDLAVEFLTNGIPEGMEQAMQAAAARGGTTPASSGGTASTTAQPLQALRNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPDLLQEINANQALFLQMMNEPIQEGSSXXXXXXXXXXXXXXXXXPAGGENPFAGGMG---NPMQMAQMIQSMNPEELGQMAQMMGVSTEQLRTTAQMIGQMPPEQLNQFIMQAM-----GGGDGGMESMFGXXXXXXXXXXGQVLRLTDEEMAAVDRLTEMGFDRAEAAQAFLACDKNEALAANLLMDSMMG 448
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK) HSP 1 Score: 269 bits (687), Expect = 2.270e-78 Identity = 209/425 (49.18%), Postives = 252/425 (59.29%), Query Frame = 2
Query: 35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGP-VPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPE--PATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPA----GAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQ--NLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMG 1282
+K+ VKT+ G+ F I++E+++T + K I + PA KLIH+GKILKDD TL E I +F+VCM +KPK A +P+ XXX XXX XXXXXXXX P A P NPE V QL DMGFPEDQ AALRAAMGN DVAVEFLM GIPE P PA+ +++ A+ T LD R HPQ N LKRLVQ +P L VLQ IG QSP LL+ IH NQ EF+ +MNEPVDES P A XXXXXX NPA MA+M+Q +L AQR Q+A +G+ QL Q + + MPPEQLQQ+M A GM G G+PPGA IRLT++E AV RL ++GF+R + QAYLACDKNEA+AANLLMDGMG
Sbjct: 1 MKLNVKTLDGKNFSIDIEESKTFAEVKDAIAEARPDLPADTQKLIHAGKILKDDQTLAEVNIGATEFIVCM-SKPKKPARASPAXXXXXXAXXXXXXXAAPVTPXXXQXXXXXXXXRPAGEAAATNTSTPAQSNYENPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAGASSGGAAASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIM----AAGM-GXXXXXXXGLPPGA-----TTIRLTQDEADAVNRLCDMGFNRNNVMQAYLACDKNEAMAANLLMDGMG 414
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A5D6YB40_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB40_9STRA) HSP 1 Score: 264 bits (675), Expect = 7.670e-77 Identity = 206/432 (47.69%), Postives = 252/432 (58.33%), Query Frame = 2
Query: 35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAV-------------VPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEH----VSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGM 1279
+K+TVKT++G F I+ E T TV K IE T FP AQ KLIH+GK+LKD+S L E +KE+DFLV MVTKPK P PS PA XXXXXXXXXXXXXXXXXXXXXX I E V QL +MGFPEDQ AL+AA NPD AVE+LM GIPE P + +AAPL +E L R HPQF+ L++L+Q +PA L VLQ IG QSP LL IH+NQ +F+A++NEP+ + AA GGLG GG P P Q+ Q++ +L P Q+ QMAA MG++P QL +S +S +PP ++Q+M M G G G G G+ I LTEEE AA+ RL ++GFDR +A QAYLACDKNEALAAN LMD M
Sbjct: 1 MKLTVKTLQGVAFSIDAEPTDTVASVKATIE-TQQSFPVAQQKLIHAGKVLKDESPLAEYNVKENDFLVVMVTKPK---APKPSXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGIVADEQMNATVQQLCEMGFPEDQVRQALQAAFNNPDRAVEYLMNGIPETVAPPAATAAAPLAGGAANSLEAL---RNHPQFDALRQLIQANPAALPAVLQQIGGQSPELLRLIHQNQDQFVAMLNEPITTPSSSVPAATGAAPLDFGGLGG----GGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPDQLRGLSQMLSNLPPGAMEQMMAS-----MGGDGAGXXXXXXXG-----GHRIMLTEEEAAAIDRLCDMGFDRNEAVQAYLACDKNEALAANFLMDSM 411
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A8J2SQ80_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQ80_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.360e-76 Identity = 196/416 (47.12%), Postives = 249/416 (59.86%), Query Frame = 2
Query: 41 ITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFP-EDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMGG 1285
+ VKT++G F++E +++ K +IE + E AA +KLIHSGK+LKDD TL + + E FLVCMVTKPK A XXXXXXXXXXXXXXXXXXXXX P + +PE ++QL MGF E+Q+ AALRAAMGN D+AVEFLM GIPE P+ + +Q L R HPQF++L+R +Q +PA L VLQ +G++ P LL I +NQ EF+A+MNEPV E+ PA MGAGG + AQ A+ +Q+++P QR Q+AA +G++P+Q Q S + MP EQL+QL+G + GGMP G P NV+RLT EE AV RL ELGF R DAAQAYLACDKNE+LAANLL DG GG
Sbjct: 3 VQVKTLEGRLFKVEAAPEASIKAVKDIIETSQPELKAAMMKLIHSGKVLKDDETLADKGVTEQSFLVCMVTKPK-----------------RARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPQNDEFVSPEALAQLNAMGFGHEEQSRAALRAAMGNVDMAVEFLMNGIPEE----QPSQNVEMTEAQAA--SPLAVLRSHPQFDELRRTIQANPASLQQVLQGLGREDPQLLQTIKDNQAEFLAMMNEPVQEA--PA-----------------MGAGGDDLDAAQFARAMQSISPQQRAQLAATIGLTPEQFEQFSQQMQNMPREQLRQLLGALGGGGMPRGAXXXXXXXXPPQ-----NVVRLTREEAEAVGRLCELGFSREDAAQAYLACDKNESLAANLLFDGFGG 371
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.170e-75 Identity = 214/462 (46.32%), Postives = 267/462 (57.79%), Query Frame = 2
Query: 35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPT----------------------------------TGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPE----PATPASPASAAPLGASQTRPM-------ETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPV---DESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGA-AGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMD 1273
+K+TVKT++G F ++ E T V K IE +FP +Q KLIH+GK+LKDDSTL E +KE+DFLV MVTKPK P P+AA XXXXXXXXXXXXXXXXXXXXXX +G VAG + V QL DMGFPEDQ +ALRAA NP+ AVE+LMTGIPE PA A+P++ GAS TL+ R HPQF+ L++LVQ +PA L VLQ IG QSP LL IH+NQ F+ ++NEP+ D P+GA LG MG GG P P Q+ Q++ +L P Q+ QMAA MG++P+QL +S +S +PP ++Q+M + GG G+ G+ GA AG G+ I L+EEE AAV RL E+GF+RTD QAYLACDKNEALAAN LMD
Sbjct: 1 MKLTVKTLQGVAFSLDAELTDAVSAVKQRIEEIQ-KFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPK---APKPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLVAGEQMSAT--------VQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAVAPAQTAAPSAEGGAGASAATATAVTGDEANTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRDAGATPSGAGAAPFD-----LG--MGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASMGGGG-------GLEGLGGGAGAGADGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMD 436
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A024TCU4_9STRA (UV excision repair protein RAD23 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCU4_9STRA) HSP 1 Score: 255 bits (651), Expect = 1.250e-73 Identity = 210/426 (49.30%), Postives = 262/426 (61.50%), Query Frame = 2
Query: 35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPK----PAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPE-----PATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMGG 1285
+K+TVKT++G + IE E TV KG +EA N Q KLIH+GK+LKDDS L E +KE+DFLV MVTKPK AA PAP + XXXXXXXXXXXXXXXXXXXXXX +T AG P G + E V QL DMGFPEDQ AAL+AA NP+ AVE+LM GIPE PA+ +PAS LGA + L+ R HPQF+ L+R++Q +P+ L VLQ IG Q+P LL IH+NQ +F+A++NEP+ E+ P+ PA G GA G P P Q+ Q++ +L+P Q+ MAA MG++ +QL Q + ++ MPPE + QLM + GG GG G P I LTEEE AAV RL ++GFDR + QAYLACDKNEALAAN LMD M G
Sbjct: 1 MKLTVKTLQGVSYPIEAELEDTVLSVKGKVEAVNGAAVDNQ-KLIHAGKVLKDDSKLSEYNVKENDFLVVMVTKPKVVRKTAADPAPPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXST-PAAGAPGIVVGEALS-ETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPEQPAAPPASTTAPASGG-LGAPTS-----LEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPIAEAATPSATPSV----PASPFGDS-GADGM-PTPQQLQQLMASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQMA------GGEGG-HGAP--------TRIHLTEEEAAAVGRLVDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 396 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1227.1734.1 >prot_F-serratus_M_contig1227.1734.1 ID=prot_F-serratus_M_contig1227.1734.1|Name=mRNA_F-serratus_M_contig1227.1734.1|organism=Fucus serratus male|type=polypeptide|length=502bp MVKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKback to top mRNA from alignment at F-serratus_M_contig1227:207439..215330+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1227.1734.1 ID=mRNA_F-serratus_M_contig1227.1734.1|Name=mRNA_F-serratus_M_contig1227.1734.1|organism=Fucus serratus male|type=mRNA|length=7892bp|location=Sequence derived from alignment at F-serratus_M_contig1227:207439..215330+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1227:207439..215330+ >mRNA_F-serratus_M_contig1227.1734.1 ID=mRNA_F-serratus_M_contig1227.1734.1|Name=mRNA_F-serratus_M_contig1227.1734.1|organism=Fucus serratus male|type=CDS|length=3012bp|location=Sequence derived from alignment at F-serratus_M_contig1227:207439..215330+ (Fucus serratus male)back to top |