mRNA_F-serratus_M_contig1227.1734.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1227.1734.1
Unique NamemRNA_F-serratus_M_contig1227.1734.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: D7FMK9_ECTSI (UV excision repair protein RAD23B homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK9_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 1.270e-145
Identity = 314/508 (61.81%), Postives = 355/508 (69.88%), Query Frame = 2
Query:   32 MVKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIP---NPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPE----PATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMGGADIMPAFQAPAAVPAPTPAAXXXXXXXXXXXXXXXXXXATADATNPPADTPAXAAPSANPGDXXXXXXXXAQEGGDEDEDMYG 1534
            MVK+TVKTIKG+KF+IEVE+T+TVR+ KGVIE  NAEFPAAQLKLIHSG+ILKD+ TL E KIKE++FLVCMVTKP                          XXXXXXXXXXXXXXXX  T   A    P         N +HV QLT+MGFPEDQ  AALRAAMGNPDVAVEFLMTGIP+     A PA  A+AAP GA     METL+DFRGHPQFN+LKRLVQRDP  LS +LQMIG+QSP LL+RIHENQG+FIALMNEP++ES PPA AA   XXX     G MMG+GGQA NPAQ+AQ+LQ ++PAQR QMAA M                   EQ QQLMG +NAGGMPG G+GG+   PPGA G GGNVIRL+EEEGAAVARL+ELGF+RTDAAQAYLACDKNEALAAN L++ MG A + PAFQAPA VPAP  AA    XXXXXXXX      +   AT  PAD P+ A   ++P +         Q GGDEDEDMYG
Sbjct:    1 MVKLTVKTIKGKKFQIEVEQTQTVREVKGVIEEQNAEFPAAQLKLIHSGQILKDECTLAEYKIKEEEFLVCMVTKPX-------------------------XXXXXXXXXXXXXXXXXXTAAAAPAAAPAXXXXXXXXNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQAAAAPAQ-AAAAPTGA-----METLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINESAPPAAAAGNAXXXXX--FGPMMGSGGQANNPAQVAQLLQGMSPAQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGI---PPGAGGAGGNVIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMG-AGMPPAFQAPAPVPAPPTAATPATXXXXXXXXSDSTAPS---ATENPAD-PSPATGESSPTNPSAGGNNP-QGGGDEDEDMYG 466          
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO)

HSP 1 Score: 283 bits (723), Expect = 7.020e-84
Identity = 217/422 (51.42%), Postives = 262/422 (62.09%), Query Frame = 2
Query:   35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPK-PAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPA--SAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVD---ESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMG 1282
            +K+TVKT+KG KF +EVE+T TV++ K  IE    E  A+ LKLIHSGK+LKD+ T+  C IK +DFLV MVTK K PAATP              XXXXXXXXXXXXXXXXXXXXXX           P      + E V  LT MGFPE +    LRAA GNPDVAVEFL  GIP+  + A  A  S++   A  T+P++ L   R HPQFN+L+RLVQ +P ML  VL  IGQQ P LL  I+ +Q  F+ +MNEPV     S P    A       A G+G  M   G   NPAQMAQM+Q+++PA+  QMA MMG+S  QL   +  + QMPPEQLQQ M  +  G     G GG +            V+RLTEEE AAV RL+E+GFDR++AAQA+LACDKNEALAANLLMD MG
Sbjct:    1 MKLTVKTLKGAKFDVEVEETHTVQEAKSAIEKEKPELVASTLKLIHSGKVLKDEDTIASCGIKPNDFLVVMVTKAKKPAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----PTRTDTFSQEAVDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNGIPDAVSAAMNATESSSATPAQATQPLQAL---RNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINSHQALFLEMMNEPVTAAPSSAPTGSRAPTASSESASGMGMPMEGMG---NPAQMAQMIQSMSPAELDQMAQMMGLSSDQLRMTAQMLGQMPPEQLQQFMAHMGGGE----GHGGQQ------------VLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMG 396          
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A6T7K158_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7K158_9STRA)

HSP 1 Score: 283 bits (723), Expect = 7.230e-84
Identity = 214/421 (50.83%), Postives = 263/421 (62.47%), Query Frame = 2
Query:   35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPA-----GGL--GSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDG 1276
            +++TVKT+KG KF ++   + TV D KG+IEA  +E PAA +KLIHSGK+LKD  ++E C IK  DFLV M+TK K AA                XXXXXXXXXXXXXXXXXXXXXX  T      P     P    E ++ LT MGFPE +A A LRAA GNPD+AVEFLM GIP PA  A  A+A    +S   P+  L   R HPQF+ L+RLVQ +P  L  VL  IGQQ P LL  I+ NQ +F+ +MNEP+      A +       PA     GG+  G M G G    NPAQMAQMLQ+++P +  +MA+MM +SP+QL   +  ISQMPPEQ Q+ M      G  G G+ GM        G+   ++RLTE+E AAV RL+E+GFDR DAAQA+LACDKNEALAANLLMDG
Sbjct:    1 MQLTVKTLKGGKFTVDAAPSSTVADVKGLIEAAKSELPAATMKLIHSGKVLKDADSIESCNIKPTDFLVVMITKAKKAAXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXATEPAVAAPPADDFPA---EVINNLTGMGFPEAEARACLRAASGNPDIAVEFLMNGIP-PAVQAQQAAATTGSSSSGEPLAAL---RSHPQFDALRRLVQSNPQTLQAVLTQIGQQQPELLREINANQAQFLEMMNEPIAVDPAAAPSVAPTVSSPAAPTGTGGMPAGLMEGMG----NPAQMAQMLQSMSPNELNEMASMMNLSPEQLTATAQMISQMPPEQFQEYMMQAMQQGGGGMGMPGMMXXXXXXGGSQPQMLRLTEDEMAAVDRLTEMGFDRADAAQAFLACDKNEALAANLLMDG 400          
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: B7FSN5_PHATC (RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSN5_PHATC)

HSP 1 Score: 281 bits (720), Expect = 2.290e-83
Identity = 206/436 (47.25%), Postives = 251/436 (57.57%), Query Frame = 2
Query:   35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPK------PAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPA----------SPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSM-MGAGGQAP---NPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMG 1282
            +K+ VKT+KGEKF I  E+++TV D KG+IEAT +E  A  LKLIHSGK+LKD+ ++    IKE+DFLV MVTK K      PAATP P  A  P P  AA     XXXXXXXXXXXX                P      + E V+ LT MGFPE +    LRAA GNPD+AVEFL  GIPE    A          SP++++   +   +P++ L   R HPQFNDL+RLVQ +P ML  VL  IGQQ P LL  I+ NQ  F+ +MNEPV+ S   + A        A  LG +  GA        NPAQMAQM+Q ++P +  QMAAMM                 PPEQL Q M     GG     +GG +            V+RLTEEE AAV RL+E+GFDR++AAQA+LACDKNEALAANLLMD MG
Sbjct:    1 MKLLVKTLKGEKFEIHAEESQTVADVKGIIEATKSELSAGTLKLIHSGKVLKDEDSIASAGIKENDFLVVMVTKAKKPVAAKPAATPTPVPAATPGPPVAAAASIEXXXXXXXXXXXX----------------PTRADDVSAEAVANLTSMGFPEAEVKHCLRAAHGNPDIAVEFLTNGIPEGVAEAAAAMNTSAVTSPSASSESSSGSGQPLQAL---RNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPQLLQEINANQALFLQIMNEPVESSASVSAAPAVSGSSDAPSLGGLDSGAAAMMEGMGNPAQMAQMIQGMSPEELNQMAAMMXXXXXXXXXXXXXXXXXPPEQLSQFMMQAMGGGEGPESMGGSQ------------VLRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLLMDSMG 405          
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A7S3P0B9_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P0B9_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.720e-78
Identity = 224/456 (49.12%), Postives = 263/456 (57.68%), Query Frame = 2
Query:   35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAA-TPAPSAAVVP---------------------APTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPASAA-------PLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXX------PAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGM----PPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMGG 1285
            +K+TVKT+ G KF IE + + TV   KG+IEA NAE PAA +KLIHSGK+LKD+  L    IKE+DFLV M+TK K A  TPAP                           A T A XXXXXXXXXXXXXXXXXXXXXX               P  +   V  L  MGFPE+     +R A GNPD+AVEFL  GIPE    A  A+AA         G + +   + L   R HPQFNDL+RLVQ +P ML  VL  IGQQ P LL  I+ NQ  F+ +MNEP+ E +      XXXXXX      PAGG     G  G   NP QMAQM+Q++NP +  QMA MMGVS +QL   +  I QMPPEQL Q +         GGG GGM  M            G V+RLT+EE AAV RL+E+GFDR +AAQA+LACDKNEALAANLLMD M G
Sbjct:    1 MKVTVKTLTGRKFPIEADDSSTVAAVKGIIEAANAELPAASMKLIHSGKVLKDEDILSTVGIKENDFLVVMITKKKAAPKTPAPQXXXXXXXXXXXXXXXXXXXXXXXXXAASTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAISDAAVENLVGMGFPEEAVRHCMRVAQGNPDLAVEFLTNGIPEGMEQAMQAAAARGGTTPASSGGTASTTAQPLQALRNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPDLLQEINANQALFLQMMNEPIQEGSSXXXXXXXXXXXXXXXXXPAGGENPFAGGMG---NPMQMAQMIQSMNPEELGQMAQMMGVSTEQLRTTAQMIGQMPPEQLNQFIMQAM-----GGGDGGMESMFGXXXXXXXXXXGQVLRLTDEEMAAVDRLTEMGFDRAEAAQAFLACDKNEALAANLLMDSMMG 448          
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK)

HSP 1 Score: 269 bits (687), Expect = 2.270e-78
Identity = 209/425 (49.18%), Postives = 252/425 (59.29%), Query Frame = 2
Query:   35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGP-VPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPE--PATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPA----GAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQ--NLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMG 1282
            +K+ VKT+ G+ F I++E+++T  + K  I     + PA   KLIH+GKILKDD TL E  I   +F+VCM +KPK  A  +P+           XXX      XXX XXXXXXXX P     A     P      NPE V QL DMGFPEDQ  AALRAAMGN DVAVEFLM GIPE  P  PA+  +++   A+ T     LD  R HPQ N LKRLVQ +P  L  VLQ IG QSP LL+ IH NQ EF+ +MNEPVDES P A       XXXXXX                NPA MA+M+Q  +L  AQR Q+A  +G+   QL Q  + +  MPPEQLQQ+M    A GM G       G+PPGA       IRLT++E  AV RL ++GF+R +  QAYLACDKNEA+AANLLMDGMG
Sbjct:    1 MKLNVKTLDGKNFSIDIEESKTFAEVKDAIAEARPDLPADTQKLIHAGKILKDDQTLAEVNIGATEFIVCM-SKPKKPARASPAXXXXXXAXXXXXXXAAPVTPXXXQXXXXXXXXRPAGEAAATNTSTPAQSNYENPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAGASSGGAAASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIM----AAGM-GXXXXXXXGLPPGA-----TTIRLTQDEADAVNRLCDMGFNRNNVMQAYLACDKNEAMAANLLMDGMG 414          
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A5D6YB40_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB40_9STRA)

HSP 1 Score: 264 bits (675), Expect = 7.670e-77
Identity = 206/432 (47.69%), Postives = 252/432 (58.33%), Query Frame = 2
Query:   35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAV-------------VPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEH----VSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGM 1279
            +K+TVKT++G  F I+ E T TV   K  IE T   FP AQ KLIH+GK+LKD+S L E  +KE+DFLV MVTKPK    P PS                 PA     XXXXXXXXXXXXXXXXXXXXXX                I   E     V QL +MGFPEDQ   AL+AA  NPD AVE+LM GIPE   P +  +AAPL       +E L   R HPQF+ L++L+Q +PA L  VLQ IG QSP LL  IH+NQ +F+A++NEP+   +    AA        GGLG     GG  P P Q+ Q++ +L P Q+ QMAA MG++P QL  +S  +S +PP  ++Q+M       M G G G       G     G+ I LTEEE AA+ RL ++GFDR +A QAYLACDKNEALAAN LMD M
Sbjct:    1 MKLTVKTLQGVAFSIDAEPTDTVASVKATIE-TQQSFPVAQQKLIHAGKVLKDESPLAEYNVKENDFLVVMVTKPK---APKPSXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGIVADEQMNATVQQLCEMGFPEDQVRQALQAAFNNPDRAVEYLMNGIPETVAPPAATAAAPLAGGAANSLEAL---RNHPQFDALRQLIQANPAALPAVLQQIGGQSPELLRLIHQNQDQFVAMLNEPITTPSSSVPAATGAAPLDFGGLGG----GGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPDQLRGLSQMLSNLPPGAMEQMMAS-----MGGDGAGXXXXXXXG-----GHRIMLTEEEAAAIDRLCDMGFDRNEAVQAYLACDKNEALAANFLMDSM 411          
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A8J2SQ80_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQ80_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.360e-76
Identity = 196/416 (47.12%), Postives = 249/416 (59.86%), Query Frame = 2
Query:   41 ITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFP-EDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMGG 1285
            + VKT++G  F++E     +++  K +IE +  E  AA +KLIHSGK+LKDD TL +  + E  FLVCMVTKPK                  A XXXXXXXXXXXXXXXXXXXXX           P +    +PE ++QL  MGF  E+Q+ AALRAAMGN D+AVEFLM GIPE      P+    +  +Q      L   R HPQF++L+R +Q +PA L  VLQ +G++ P LL  I +NQ EF+A+MNEPV E+  PA                 MGAGG   + AQ A+ +Q+++P QR Q+AA +G++P+Q  Q S  +  MP EQL+QL+G +  GGMP G         P       NV+RLT EE  AV RL ELGF R DAAQAYLACDKNE+LAANLL DG GG
Sbjct:    3 VQVKTLEGRLFKVEAAPEASIKAVKDIIETSQPELKAAMMKLIHSGKVLKDDETLADKGVTEQSFLVCMVTKPK-----------------RARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPQNDEFVSPEALAQLNAMGFGHEEQSRAALRAAMGNVDMAVEFLMNGIPEE----QPSQNVEMTEAQAA--SPLAVLRSHPQFDELRRTIQANPASLQQVLQGLGREDPQLLQTIKDNQAEFLAMMNEPVQEA--PA-----------------MGAGGDDLDAAQFARAMQSISPQQRAQLAATIGLTPEQFEQFSQQMQNMPREQLRQLLGALGGGGMPRGAXXXXXXXXPPQ-----NVVRLTREEAEAVGRLCELGFSREDAAQAYLACDKNESLAANLLFDGFGG 371          
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.170e-75
Identity = 214/462 (46.32%), Postives = 267/462 (57.79%), Query Frame = 2
Query:   35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPT----------------------------------TGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPE----PATPASPASAAPLGASQTRPM-------ETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPV---DESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGA-AGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMD 1273
            +K+TVKT++G  F ++ E T  V   K  IE    +FP +Q KLIH+GK+LKDDSTL E  +KE+DFLV MVTKPK    P P+AA         XXXXXXXXXXXXXXXXXXXXXX                                    +G VAG  +           V QL DMGFPEDQ  +ALRAA  NP+ AVE+LMTGIPE    PA  A+P++    GAS             TL+  R HPQF+ L++LVQ +PA L  VLQ IG QSP LL  IH+NQ  F+ ++NEP+   D    P+GA           LG  MG GG  P P Q+ Q++ +L P Q+ QMAA MG++P+QL  +S  +S +PP  ++Q+M  +  GG       G+ G+  GA AG  G+ I L+EEE AAV RL E+GF+RTD  QAYLACDKNEALAAN LMD
Sbjct:    1 MKLTVKTLQGVAFSLDAELTDAVSAVKQRIEEIQ-KFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPK---APKPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLVAGEQMSAT--------VQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAVAPAQTAAPSAEGGAGASAATATAVTGDEANTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRDAGATPSGAGAAPFD-----LG--MGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASMGGGG-------GLEGLGGGAGAGADGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMD 436          
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Match: A0A024TCU4_9STRA (UV excision repair protein RAD23 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCU4_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.250e-73
Identity = 210/426 (49.30%), Postives = 262/426 (61.50%), Query Frame = 2
Query:   35 VKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGKILKDDSTLEECKIKEDDFLVCMVTKPK----PAATPAPSAAVVPAPTGAAXXXXXXXXXXXXXXXXXXXXXXPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFPEDQAIAALRAAMGNPDVAVEFLMTGIPE-----PATPASPASAAPLGASQTRPMETLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEFIALMNEPVDESNPPAGAAXXXXXXPAGGLGSMMGAGGQAPNPAQMAQMLQNLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPGGGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLACDKNEALAANLLMDGMGG 1285
            +K+TVKT++G  + IE E   TV   KG +EA N      Q KLIH+GK+LKDDS L E  +KE+DFLV MVTKPK     AA PAP +          XXXXXXXXXXXXXXXXXXXXXX +T   AG P    G   + E V QL DMGFPEDQ  AAL+AA  NP+ AVE+LM GIPE     PA+  +PAS   LGA  +     L+  R HPQF+ L+R++Q +P+ L  VLQ IG Q+P LL  IH+NQ +F+A++NEP+ E+  P+         PA   G   GA G  P P Q+ Q++ +L+P Q+  MAA MG++ +QL Q +  ++ MPPE + QLM  +       GG GG  G P          I LTEEE AAV RL ++GFDR +  QAYLACDKNEALAAN LMD M G
Sbjct:    1 MKLTVKTLQGVSYPIEAELEDTVLSVKGKVEAVNGAAVDNQ-KLIHAGKVLKDDSKLSEYNVKENDFLVVMVTKPKVVRKTAADPAPPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXST-PAAGAPGIVVGEALS-ETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPEQPAAPPASTTAPASGG-LGAPTS-----LEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPIAEAATPSATPSV----PASPFGDS-GADGM-PTPQQLQQLMASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQMA------GGEGG-HGAP--------TRIHLTEEEAAAVGRLVDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 396          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1227.1734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMK9_ECTSI1.270e-14561.81UV excision repair protein RAD23B homolog n=1 Tax=... [more]
A0A1Z5KBW7_FISSO7.020e-8451.42UV excision repair protein RAD23 n=2 Tax=Fistulife... [more]
A0A6T7K158_9STRA7.230e-8450.83Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B7FSN5_PHATC2.290e-8347.25RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850... [more]
A0A7S3P0B9_9STRA1.720e-7849.12Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A7S4DGQ1_HETAK2.270e-7849.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5D6YB40_9STRA7.670e-7747.69Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8J2SQ80_9STRA1.360e-7647.12Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A225X0I0_9STRA1.170e-7546.32UV excision repair protein RAD23 n=13 Tax=Phytopht... [more]
A0A024TCU4_9STRA1.250e-7349.30UV excision repair protein RAD23 n=2 Tax=Aphanomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1227contigF-serratus_M_contig1227:207439..215330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.1
Seed ortholog evalue8.3e-125
Seed eggNOG ortholog2880.D7FMK9
Preferred nameRad23
KEGG koko:K10839,ko:K18180
KEGG Pathwayko03420,ko04141,ko04714,map03420,map04141,map04714
Hectar predicted targeting categoryother localisation
GOsGO:0002020,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0015630,GO:0016579,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0030162,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031593,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0042176,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045069,GO:0045070,GO:0045732,GO:0045787,GO:0045862,GO:0046483,GO:0048518,GO:0048522,GO:0048524,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0051726,GO:0060255,GO:0061136,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0140030,GO:1901360,GO:1901363,GO:1901564,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903900,GO:1903902,GO:1990381,GO:2000058,GO:2000060
EggNOG free text desc.ubiquitin
EggNOG OGsCOG5272@1,KOG0011@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko03051,ko03400
Exons7
Model size2356
Cds size1506
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929141.982251-UTR-F-serratus_M_contig1227:207438..2074691622929141.982251-UTR-F-serratus_M_contig1227:207438..207469Fucus serratus maleUTRF-serratus_M_contig1227 207439..207469 +
1690962722.6065693-UTR-F-serratus_M_contig1227:207438..2074691690962722.6065693-UTR-F-serratus_M_contig1227:207438..207469Fucus serratus maleUTRF-serratus_M_contig1227 207439..207469 +
1622929142.0862164-UTR-F-serratus_M_contig1227:214511..2153301622929142.0862164-UTR-F-serratus_M_contig1227:214511..215330Fucus serratus maleUTRF-serratus_M_contig1227 214512..215330 +
1690962722.6699083-UTR-F-serratus_M_contig1227:214511..2153301690962722.6699083-UTR-F-serratus_M_contig1227:214511..215330Fucus serratus maleUTRF-serratus_M_contig1227 214512..215330 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929141.9988067-CDS-F-serratus_M_contig1227:207469..2075381622929141.9988067-CDS-F-serratus_M_contig1227:207469..207538Fucus serratus maleCDSF-serratus_M_contig1227 207470..207538 +
1690962722.6163225-CDS-F-serratus_M_contig1227:207469..2075381690962722.6163225-CDS-F-serratus_M_contig1227:207469..207538Fucus serratus maleCDSF-serratus_M_contig1227 207470..207538 +
1622929142.011156-CDS-F-serratus_M_contig1227:208046..2082021622929142.011156-CDS-F-serratus_M_contig1227:208046..208202Fucus serratus maleCDSF-serratus_M_contig1227 208047..208202 +
1690962722.6238275-CDS-F-serratus_M_contig1227:208046..2082021690962722.6238275-CDS-F-serratus_M_contig1227:208046..208202Fucus serratus maleCDSF-serratus_M_contig1227 208047..208202 +
1622929142.0232656-CDS-F-serratus_M_contig1227:210433..2107451622929142.0232656-CDS-F-serratus_M_contig1227:210433..210745Fucus serratus maleCDSF-serratus_M_contig1227 210434..210745 +
1690962722.6313803-CDS-F-serratus_M_contig1227:210433..2107451690962722.6313803-CDS-F-serratus_M_contig1227:210433..210745Fucus serratus maleCDSF-serratus_M_contig1227 210434..210745 +
1622929142.0391033-CDS-F-serratus_M_contig1227:211200..2115141622929142.0391033-CDS-F-serratus_M_contig1227:211200..211514Fucus serratus maleCDSF-serratus_M_contig1227 211201..211514 +
1690962722.639402-CDS-F-serratus_M_contig1227:211200..2115141690962722.639402-CDS-F-serratus_M_contig1227:211200..211514Fucus serratus maleCDSF-serratus_M_contig1227 211201..211514 +
1622929142.0527253-CDS-F-serratus_M_contig1227:212145..2122631622929142.0527253-CDS-F-serratus_M_contig1227:212145..212263Fucus serratus maleCDSF-serratus_M_contig1227 212146..212263 +
1690962722.6470616-CDS-F-serratus_M_contig1227:212145..2122631690962722.6470616-CDS-F-serratus_M_contig1227:212145..212263Fucus serratus maleCDSF-serratus_M_contig1227 212146..212263 +
1622929142.0623574-CDS-F-serratus_M_contig1227:212415..2126341622929142.0623574-CDS-F-serratus_M_contig1227:212415..212634Fucus serratus maleCDSF-serratus_M_contig1227 212416..212634 +
1690962722.654633-CDS-F-serratus_M_contig1227:212415..2126341690962722.654633-CDS-F-serratus_M_contig1227:212415..212634Fucus serratus maleCDSF-serratus_M_contig1227 212416..212634 +
1622929142.0735714-CDS-F-serratus_M_contig1227:214193..2145111622929142.0735714-CDS-F-serratus_M_contig1227:214193..214511Fucus serratus maleCDSF-serratus_M_contig1227 214194..214511 +
1690962722.6622944-CDS-F-serratus_M_contig1227:214193..2145111690962722.6622944-CDS-F-serratus_M_contig1227:214193..214511Fucus serratus maleCDSF-serratus_M_contig1227 214194..214511 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1227.1734.1prot_F-serratus_M_contig1227.1734.1Fucus serratus malepolypeptideF-serratus_M_contig1227 207470..214511 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1227.1734.1

>prot_F-serratus_M_contig1227.1734.1 ID=prot_F-serratus_M_contig1227.1734.1|Name=mRNA_F-serratus_M_contig1227.1734.1|organism=Fucus serratus male|type=polypeptide|length=502bp
MVKITVKTIKGEKFRIEVEKTRTVRDTKGVIEATNAEFPAAQLKLIHSGK
ILKDDSTLEECKIKEDDFLVCMVTKPKPAATPAPSAAVVPAPTGAAPAAS
PAPAASPSIPAASPFPAAPTTGRVAGGPVPGHGPIPNPEHVSQLTDMGFP
EDQAIAALRAAMGNPDVAVEFLMTGIPEPATPASPASAAPLGASQTRPME
TLDDFRGHPQFNDLKRLVQRDPAMLSHVLQMIGQQSPTLLSRIHENQGEF
IALMNEPVDESNPPAGAAAAAAGGPAGGLGSMMGAGGQAPNPAQMAQMLQ
NLNPAQRTQMAAMMGVSPQQLAQISHAISQMPPEQLQQLMGMVNAGGMPG
GGLGGMRGMPPGAAGTGGNVIRLTEEEGAAVARLSELGFDRTDAAQAYLA
CDKNEALAANLLMDGMGGADIMPAFQAPAAVPAPTPAAPATESAPTAANT
PPSATRATADATNPPADTPAPAAPSANPGDGDGDGDGRAQEGGDEDEDMY
G*
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mRNA from alignment at F-serratus_M_contig1227:207439..215330+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1227.1734.1 ID=mRNA_F-serratus_M_contig1227.1734.1|Name=mRNA_F-serratus_M_contig1227.1734.1|organism=Fucus serratus male|type=mRNA|length=7892bp|location=Sequence derived from alignment at F-serratus_M_contig1227:207439..215330+ (Fucus serratus male)
TTGTCTTAGACTCGCTCTCGACAGAAACATCATGGTTAAGATTACAGTGA AGACAATCAAGGGTGAAAAATTCCGAATCGAGGTGGAAAAGACGCGAACG GTGAGGTTCCTTTTTATGCGTAGTCGTAGATTCAAATGATCATCTGATTC GGAGCTCCTTAACCCAGCTCTTGGTTTTCCCTTCACGGTACTTCACTAAA GTACTATAACAGGCTCTACGGCACTAGTAATATGTACAGTAGCTTCTGTT ATACTACCTACTACTGTCTGTACAAGTATTGTACAAGGTAATTGTTGCTG AGATTGAGCTACAAGTTCAAACTATATTAGACAAATTCTTTGACGATGAC AAGTGCTGAGCTTGTTCTGTACGTGCAGCTCTAAACGTCTGCGTATGGAG CACTCCGTAGAGTACTTATGATGCACGCATTATCTATCCTGGCCGGCCTT CTCACGAGAGAAGCAACGCTGCGCACGATCCTAGATACAGTTGTCCTGTT AATAGTACAGTTATAGTGAATATTTTGAGATGACGAGGTACGTGTTTTTC TCCATCGCTGCCGCCGCACGTGTGCGCGATTACTGTATTTCTACTGTATT TCTAATAGGTTCGAGACACCAAGGGGGTGATCGAAGCGACCAATGCGGAG TTTCCAGCGGCGCAGCTCAAGCTTATTCACTCTGGAAAGATCTTGAAAGA TGATAGCACCTTAGAGGAGTGCAAAATAAAAGAGGACGACTTCCTCGTGT GCATGGTTACTAAGGTGCGCATTCCATGTTTTTGAGAGCATCATTTTTAG CTTCTTCGATAGCACATATTGATGTGGGAAAGAGAGGCGAATATTAATTG GTCCATGGTGACCTGCCAAGGCAGCACTCTTTCGAAACTGCCTTGAGGTT TACTGGCCCTGTGTCGGTGGAATCTCGTCTGTAAACGCCATCGGTACGCA ATTGCGTGACCCGATAAACTCGGGACTGACCCGATGGCGTATGGCAGTTT TAAATGAATAAATGGACGCCGCCGCGGAAATCGGGAGAATCCCCTCATAA GTAAGTACCAGATTCAGCCTGAGTATGGAGATGAGCAAGCTGACGCGGGA CGGGACTGCCGAACCCGTCTCGCGAGACCAAGTTCTCAGGCGCGAACGCG GACAGGGAAATATTTATTTCCTCTGTCCAGCTGAACACGAGCAGGATTGG CAACTTTACTTGATCCATACTCTTGCTGTATGTGATGACTATACATACAT ACAATAAAACGTACCTATGTGTCTTGCCTTTTCCTCCTCTCTTTCTACGA CACTTCGTTCGTACGTACCTCCAGTCCCACGAGTCCTTAGAGAATCTGAT GATTAACCGCGATTTATACGTGGTCGTGGCATTGGCCGAGGCTATTGATA GGAGTTCGCGTCTGGCTACCATTGAGTAGAATTATCCTTTGTTGCTAAAA ATCGTTTTCCCCCGATCTGTATAGGCTGGGCTGGCCAAGAAACTGACTTC TGTTCGTTCATGTCTCGCTCTGCCGTTTCTACGAGTTAAAGCTTGAAATT TGGAGGCTGCTCCTATACGGCAAAAAGGGAAGCGCAGGCGCCGGAATTTT TCGAATCCGAGTTGATTTTGGTAAACAATGACCAATTGGCGGCGTAGTGG AGGATACTTCCTATACTAAAATCAGTATGAAAAAAAGTGTCACGGATCAA GCTGAAATTTGGTGTACACGTATCCAGGAGCACCGCAAGAGCGTGGGTGG TAGTTACAAGGCTCGCCTCGTTTTCTATCAAGAGTTGCGGCCTCGTAAAG ATTCCGATACAAAACACAAGTGAACTGAGGAAATGTGGGGGTATCGCGAT TTGCCACGCGGTTTTTACGATTTTTCACCTGAAATTTTGACACGTGATTT AGACCGCTCTTGCGGAGAGGACCACCACTGCACATTTTTATTTATTGCTA TTTTTTCCATCATTTCGTCGCGAAACAAATATTCCCACATCTACTTATAT CCGGCTATCATACCATAACTTATGCAAAAAAAACTAAAACCAAAATGTGC AGTGGTGGTCCTCTCCGCAAGAGCGGTCTTAATAACGTGTCAAAATTTCT GGTGAAAATTCGTAAAAACCGCGTGGCAAATCTCATTCCGCCATGTGTAC AGTGTCTTGGCCAGCCCAGCCTGTAGATTCATCATACCAGTGTCTCACGC TTTGCCCGGATACCCGCCTCCATTAATACCCGGAGAACTCTACGGGAACT GTGTACAGGAACTCTGTGTAGTGTTTTGAGCTTGTTCAATTATGTCGCTT GGTCGCGACGGAAATCTCCAGCTTTAAGCTTTTCTCAGATGAGTTGGGCA TTAGCCGCACCTTGCAGATCCATAAGATCCTCTCTGTCTTCAAGAGATAA TTTACTCACAAGAAAGTAAACACATTTTTCCATCGTGTCTATGTTCCCTG CACGGCAGCGCAACGAGCGGCCAAAAGCGATGATGTGTACTGTATTACTT ACTTAGCAACTTGGGTGTCTACAGTGTACAATGACTAGTGCTGGTTCGGC ATAGACTGTGTGTGAATGTTACTACTGATATTGCTCCTGCCGGCCGAAAG CTGCCCCGTTGATTGATCCTTAGGGGCTTATAGGCATTAGCCCCGCCGTT GCCGCTGTAAGATTTGCCGTCTTGGGCTCTTAGGATAGCTTAGCGGTACG AGACTACTTAATAGCCATTGGTAAAACAAACTGCGCCGCCGTCAGTAATG TGGCAACGCAGTCAACAAATCATTGATTCCAGACTTTTACTTTGGGATCG GCCAGGTCTTCTGACGACCACCAGCCAATGCAATTCGCGGTCAACTAAAT GGAAAACAATGAAAATAGCGAATAGATGCCCTTTATTTTGCTCATATTTG CGGTATCCTTGTACTTCCTCGCTCACTCAGCCCGTTTCCGCTCTCCGATT TTGGCCGCGTGCGGGCTACGAATGCTTAAATGCTTCAACGAACAGCCAAA GCCCGCCGCAACCCCAGCACCTTCGGCAGCAGTCGTTCCTGCACCAACTG GCGCCGCGCCAGCGGCTTCTCCAGCTCCTGCCGCATCTCCTTCTATACCT GCAGCATCTCCATTCCCAGCAGCACCGACGACTGGTCGTGTTGCTGGTGG TCCTGTTCCTGGGCATGGACCCATCCCGAACCCAGAGCACGTATCCCAAC TGACTGATATGGGATTTCCCGAAGATCAGGCAATCGCGGCGCTTCGTGCT GCAATGGGCAACCCAGACGTTGCGGTGGAATTCCTGATGACCGGGATTCC CGAACCGGTATGTATGCGTAAACCTGTTGATAAAGCTGGGTGAGCTGGGC GGCCCAATCAGTAATGCTCGGTCGACATGACATAATCAATGTTGAAGCGA AGAACATACCGGTACCTCTTTTCCAGTCGCGCACACACCCGTGTAACCTC TCAGTCGATGTTTCGCAAATGGTTCCTATATTTTCCGCCGGTTGGAGTTC CCCGTGCCTCACATTTCTGGCATTGCCTGCACGTCTCTGCATATTTGTCA AGAACAGCTCCGTCTTCTGACTTTTGTCCCATGGCGCCAGCTGCGTACTG ATTTGTTATTACTGCGACTTTCTGCACCCTAGGAGGACGCTGCTCGTACT TCTACATACGTCGAGTCATTTCCCGCGAACAGACCGGAAACTTCGTCTTA ACAATGTCTTATCTGGCGCGTTGCGTCCCCTTCCCATGCGGACTTGCTCC CATCCCGTGCAGGCTACACCTGCTTCACCTGCTTCAGCTGCGCCGCTGGG TGCTTCACAGACTCGACCCATGGAAACCCTTGATGACTTCCGTGGGCATC CGCAATTTAATGACTTGAAGCGTTTGGTACAGCGCGACCCGGCCATGCTC TCGCACGTTCTGCAGATGATCGGGCAGCAGAGCCCAACCCTTCTCTCTCG CATACACGAGAATCAGGGGGAGTTCATCGCTCTAATGAACGAGCCTGTAG ACGAGTCCAACCCTCCGGCAGGGGCTGCAGCTGCAGCAGCGGGTGGGCCC GCGGGAGGCCTGGGCTCGATGATGGGGTGAGCCCACTCAGTGGTTTCCGC AGCTATGCTGCTCTCCTATTCAACAAATATCTTACTAATATCAAATTGCA CGACACCTATTAGGATAGTGAAGAGCTGGTTGCGAACCGAAACGATGTCA CTCGATTCATCGCACAAGTGTGGCGTAAAATCTTTAATGACATTTTACAG TAGATGACAGATCGCGATAATGAGGAGGGCATTGAAGAGGTTGTCATGTC AGGATTCGTGAGGAAATACGCGGATTATCTTACGTCACTGATCATACGCC AGTCTACTTTAGGTGCTCTATTGAACATAAGTATTCTCGTTGACTAACGC TATGTTGAATACGTGGTCTAGTTCGAAACGAAACTTTCAAATATCGAGGT CGTGAGGTATCCGTGTTTTGAGTGTTTGATTCAATCAATCAATCAATCAA TCAGGGTGATAATTCGAGGGTGGGTAAGATTCCTTTCTATGTATCAGTCA TGTTTTTGCTTACTTATTTTGGTGGCTTCAACTTGCCAAACACCAATCCG TAGTTTGGCAGGGTTGACGACTTGCCAAGAGCGAAAATCGTGTTGCGGTG AACATTTTCTAAACTCTAACGCGGCCACCCTCCTGCCCTACGCTCCTCCA ACCTCAGCGCTGGGGGGCAAGCACCCAACCCTGCCCAGATGGCCCAGATG TTGCAGAACCTCAACCCCGCACAGAGAACCCAGATGGCCGCAATGATGGG AGTCTCACCGCAGCAGCTGGCGCAGGTATGATATAATATGACAGCAACAT TGCGTCGGAATTTGCTCGTTTCATGTCTTCATCGCTTTAAGGATGAGGAA GCATCCCGTGATTCGTCCTGCTCACGCTCTAATATTCCTCGCGATGGACT CTCTTGCTCTCGCTATACTATGAATAGATAAGTCACGCCATCAGCCAGAT GCCGCCTGAGCAACTTCAACAACTTATGGGGATGGTCAATGCCGGCGGAA TGCCGGGTGGAGGTCTCGGAGGCATGAGAGGCATGCCCCCCGGGGCCGCA GGTACCGGAGGAAACGTTATCCGTCTGACGGAAGAAGAAGGGGCTGCTGT TGCCCGCCTGTCCGAGCTTGGCTTTGACAGAACAGACGCTGCGCAGGTGA GAGAGAGGCTCAAGAAGGTCCTTGAAATGAAGTAGAGTCAATATCAATGC TGACGGTACATGTCCTTCGCCATGTTCGGCTGGTTCCAAACTGCGCCTTG TCTCGTTTCGTATTTCACCCTACTTAGGTGGAGTCTTAACCTACAACAGA ATACAAAAGAATCTGTTCATAGAACGATTCTACAGAGCAGATCCTATTTT GGGTCCTAAGGACCATATTAGGAAATGCGGTGTAAACTAGACTGTCACCC CCCCGAGTGATTAACGCCTCCGTGTGATTTTGAAAACAAAACGAGGCAAC CGGGAGGCAGCACTTTTTACAAGTTGAGCAGGCCACGTCAAACACGAGCT ATATGAGGTTTATTTTTTTACGGCCGCGCGAGTGCAAGCAGTCGGACGAA CCCATCTCAAAATCCATCCACGATGGATTTTAGAGTCCCCGTTGCTTGCA AAGCCGAGCAGGGGGAGGTATGGCAGAGGAAGTGCTGTAGCCTGGATCGG CAGCCTCCGAGTGATTTTGAAAACAAAACGAACCGGGAGGCAGCACTTTT TACAAGTTGAGCAGGCCACATGTCAAACACGAGCTATATGAGGTCTATTT TTTTACGGCCGCTCGAGTGCAAGCAGTCGGACGAACCCATCTCAAAATCC ATCCAGGATGGATTTTGAACTCGCTGTAGAGTCCCCGTTGCTTGCGAAGC CGGGCAGGGGGAGGTAGGGCGGAGGAAGTGCTGTAGCTTGGATCGGTAGC TTCCGAGTGATTTTGAAAACAAAACGAGGCAACCGGGAGGCAGCACTTTT TACAAGTTGAGCAGGCCACATGTCACACACGAGCTATATGAGGTCTATTT TTTTACGGCCGCCCGAGTGCCAGGTCGCCGCCTCTCTCCGAAGACATGTT GTGTTTGAAGAAAATACAGAACGCACCCTAGACCTTGTTGGGGCAACGCA GGCTGTGCACCATGTCGTTTTTTGTGTGTTTTGTTTTGTTGTGCCGCAGC TATTCTGTTGTTACTGATGTTTGAGGGTCCGGCCGACAGAACTGCACGTC GACAGAAAAAAATAAATGCCAAATCAATTAATTAAATCTGTCGATCTCCA CAGATTCTGTCGTGCCCAGAACTTGCCGATTTGTAGTTTTTAGTAGTGTC GAGCTCATTTGGCCAATCACAGATCGACAGATTCTGACTCCAGATTCAAA TTTTGAAGGTTAAGACAGGGCCTTATTATAGGCACAAGATTCCTCCTCCA CCCAAGGTTTCTTTTCTATTAATAGTAAGTTTATTCTTGGTGTGCTGTAT CTTTGATTTTTTTTCAAGGCATGAAATTTCCAATCGTTTCAGTCGGTGTT CTCATCGGGGGAAATTGGTCAAAATTCCACAGCATTCAACAGGTCACAAA TGCTATTGAATAAGGAAATAACGGAAAGGTTGTTATAGTAACGCGAAGCC CTGAACATTTAGAAATTTTAGACTGAACCTGTGAATTTTAGGGTTCATGA ACGCATGAAATAATATTATATCGACGCTTCTGCTGGCATGCCTTGAACTT AACAGGCGTACTTGGCGTGCGACAAGAACGAAGCGTTGGCAGCCAACCTT TTGATGGATGGAATGGGAGGCGCTGATATTATGCCCGCTTTCCAAGCCCC CGCCGCAGTGCCTGCACCCACCCCCGCAGCTCCTGCTACTGAAAGTGCCC CTACCGCAGCAAACACCCCACCTTCGGCAACAAGGGCGACCGCTGACGCG ACCAATCCGCCTGCAGATACTCCTGCTCCTGCCGCGCCGTCTGCAAACCC AGGTGATGGTGATGGTGATGGTGATGGCCGGGCACAAGAAGGCGGAGACG AAGATGAGGACATGTACGGATAAGAAGTCTCGACGCAACAAGGGGGGTGG TGGGATAATTGACCCGTCTTGCTTCCTCGCAGGCGTAGGAAAATTTCCTT GTTGGCAAGGGGGGCTAAAGTTATTTCTTAGTTTCAGTACATAAAACGAA AAAATGGTACGCGACTGTCCAGGACTCTCTTCGGACGTGGATTTGTTAGT TTGTCAGTGGAAGAGTTCGTACAGCGACATGTAGTTCGAGGTCTCCGTTA GCTCGCTGGCATATTTCGCGCCACGTTCTCCTGCTTTTGAGGATATTTAG AGGCATCGTTAAGGATAACCTCAAAAATCGAAAATGTACACGCTTTGCGG ATATCGCACAAGTACAATAATAAATAGTGCACCTGATATGTTGGGACGCA ACCTTTCATGTAGCCATTCATTGATAAGTGTTCTTCACCGAGAATAATTT TCGTGGTCGCCTACGTACTCTGAACAAAAAGCTTTGTCCAAAGTAGTGTT CACCCACCCACATAATGAGGCCTTCAGCTCCGAAGCATTTCGATAGCCCA ATTCAAGTGCGACCTGAATTGTCTAGCAGCCGTATAGCTCATATCTCGAG GAACGCCGACCTGGTCAGGAACAATACACATGAAGAAATACAGAAAAAAG TTGATGAACAGTGCCACAGTATAGTACTGGAAAATTCGAGAATTTTTTAC CAGCCATAATTATAATGCCGCCCATTACTCTTAGCATCGAGGAACCCGAC TGAATTTCGTCAAGAGTTTTTGTGCTAACAGAATGTTCCCAGTCGATTTC TACACGAACCGGTGTGTACCTATGCATTTCTAAATATTAATA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1227:207439..215330+

>mRNA_F-serratus_M_contig1227.1734.1 ID=mRNA_F-serratus_M_contig1227.1734.1|Name=mRNA_F-serratus_M_contig1227.1734.1|organism=Fucus serratus male|type=CDS|length=3012bp|location=Sequence derived from alignment at F-serratus_M_contig1227:207439..215330+ (Fucus serratus male)
ATGGTTAAGATTACAGTGAAGACAATCAAGGGTGAAAAATTCCGAATCGA
GGTGGAAAAGACGCGAACGATGGTTAAGATTACAGTGAAGACAATCAAGG
GTGAAAAATTCCGAATCGAGGTGGAAAAGACGCGAACGGTTCGAGACACC
AAGGGGGTGATCGAAGCGACCAATGCGGAGTTTCCAGCGGCGCAGCTCAA
GCTTATTCACTCTGGAAAGATCTTGAAAGATGATAGCACCTTAGAGGAGT
GCAAAATAAAAGAGGACGACTTCCTCGTGTGCATGGTTACTAAGGTTCGA
GACACCAAGGGGGTGATCGAAGCGACCAATGCGGAGTTTCCAGCGGCGCA
GCTCAAGCTTATTCACTCTGGAAAGATCTTGAAAGATGATAGCACCTTAG
AGGAGTGCAAAATAAAAGAGGACGACTTCCTCGTGTGCATGGTTACTAAG
CCAAAGCCCGCCGCAACCCCAGCACCTTCGGCAGCAGTCGTTCCTGCACC
AACTGGCGCCGCGCCAGCGGCTTCTCCAGCTCCTGCCGCATCTCCTTCTA
TACCTGCAGCATCTCCATTCCCAGCAGCACCGACGACTGGTCGTGTTGCT
GGTGGTCCTGTTCCTGGGCATGGACCCATCCCGAACCCAGAGCACGTATC
CCAACTGACTGATATGGGATTTCCCGAAGATCAGGCAATCGCGGCGCTTC
GTGCTGCAATGGGCAACCCAGACGTTGCGGTGGAATTCCTGATGACCGGG
ATTCCCGAACCGCCAAAGCCCGCCGCAACCCCAGCACCTTCGGCAGCAGT
CGTTCCTGCACCAACTGGCGCCGCGCCAGCGGCTTCTCCAGCTCCTGCCG
CATCTCCTTCTATACCTGCAGCATCTCCATTCCCAGCAGCACCGACGACT
GGTCGTGTTGCTGGTGGTCCTGTTCCTGGGCATGGACCCATCCCGAACCC
AGAGCACGTATCCCAACTGACTGATATGGGATTTCCCGAAGATCAGGCAA
TCGCGGCGCTTCGTGCTGCAATGGGCAACCCAGACGTTGCGGTGGAATTC
CTGATGACCGGGATTCCCGAACCGGCTACACCTGCTTCACCTGCTTCAGC
TGCGCCGCTGGGTGCTTCACAGACTCGACCCATGGAAACCCTTGATGACT
TCCGTGGGCATCCGCAATTTAATGACTTGAAGCGTTTGGTACAGCGCGAC
CCGGCCATGCTCTCGCACGTTCTGCAGATGATCGGGCAGCAGAGCCCAAC
CCTTCTCTCTCGCATACACGAGAATCAGGGGGAGTTCATCGCTCTAATGA
ACGAGCCTGTAGACGAGTCCAACCCTCCGGCAGGGGCTGCAGCTGCAGCA
GCGGGTGGGCCCGCGGGAGGCCTGGGCTCGATGATGGGGCTACACCTGCT
TCACCTGCTTCAGCTGCGCCGCTGGGTGCTTCACAGACTCGACCCATGGA
AACCCTTGATGACTTCCGTGGGCATCCGCAATTTAATGACTTGAAGCGTT
TGGTACAGCGCGACCCGGCCATGCTCTCGCACGTTCTGCAGATGATCGGG
CAGCAGAGCCCAACCCTTCTCTCTCGCATACACGAGAATCAGGGGGAGTT
CATCGCTCTAATGAACGAGCCTGTAGACGAGTCCAACCCTCCGGCAGGGG
CTGCAGCTGCAGCAGCGGGTGGGCCCGCGGGAGGCCTGGGCTCGATGATG
GGCGCTGGGGGGCAAGCACCCAACCCTGCCCAGATGGCCCAGATGTTGCA
GAACCTCAACCCCGCACAGAGAACCCAGATGGCCGCAATGATGGGAGTCT
CACCGCAGCAGCTGGCGCAGCGCTGGGGGGCAAGCACCCAACCCTGCCCA
GATGGCCCAGATGTTGCAGAACCTCAACCCCGCACAGAGAACCCAGATGG
CCGCAATGATGGGAGTCTCACCGCAGCAGCTGGCGCAGATAAGTCACGCC
ATCAGCCAGATGCCGCCTGAGCAACTTCAACAACTTATGGGGATGGTCAA
TGCCGGCGGAATGCCGGGTGGAGGTCTCGGAGGCATGAGAGGCATGCCCC
CCGGGGCCGCAGGTACCGGAGGAAACGTTATCCGTCTGACGGAAGAAGAA
GGGGCTGCTGTTGCCCGCCTGTCCGAGCTTGGCTTTGACAGAACAGACGC
TGCGCAGATAAGTCACGCCATCAGCCAGATGCCGCCTGAGCAACTTCAAC
AACTTATGGGGATGGTCAATGCCGGCGGAATGCCGGGTGGAGGTCTCGGA
GGCATGAGAGGCATGCCCCCCGGGGCCGCAGGTACCGGAGGAAACGTTAT
CCGTCTGACGGAAGAAGAAGGGGCTGCTGTTGCCCGCCTGTCCGAGCTTG
GCTTTGACAGAACAGACGCTGCGCAGGCGTACTTGGCGTGCGACAAGAAC
GAAGCGTTGGCAGCCAACCTTTTGATGGATGGAATGGGAGGCGCTGATAT
TATGCCCGCTTTCCAAGCCCCCGCCGCAGTGCCTGCACCCACCCCCGCAG
CTCCTGCTACTGAAAGTGCCCCTACCGCAGCAAACACCCCACCTTCGGCA
ACAAGGGCGACCGCTGACGCGACCAATCCGCCTGCAGATACTCCTGCTCC
TGCCGCGCCGTCTGCAAACCCAGGTGATGGTGATGGTGATGGTGATGGCC
GGGCACAAGAAGGCGGAGACGAAGATGAGGACATGTACGGATAAGCGTAC
TTGGCGTGCGACAAGAACGAAGCGTTGGCAGCCAACCTTTTGATGGATGG
AATGGGAGGCGCTGATATTATGCCCGCTTTCCAAGCCCCCGCCGCAGTGC
CTGCACCCACCCCCGCAGCTCCTGCTACTGAAAGTGCCCCTACCGCAGCA
AACACCCCACCTTCGGCAACAAGGGCGACCGCTGACGCGACCAATCCGCC
TGCAGATACTCCTGCTCCTGCCGCGCCGTCTGCAAACCCAGGTGATGGTG
ATGGTGATGGTGATGGCCGGGCACAAGAAGGCGGAGACGAAGATGAGGAC
ATGTACGGATAA
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