mRNA_F-serratus_M_contig1219.1704.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: D7FX94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX94_ECTSI) HSP 1 Score: 358 bits (919), Expect = 2.200e-117 Identity = 194/282 (68.79%), Postives = 227/282 (80.50%), Query Frame = 2
Query: 248 MSDPAGMDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKNGEFIVPLSQERLGSLRQSVKIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAAPQEERPPPGILE 1093
MSD AGMDT+I++LK APD + LTLKVSK VQQVAQPAFFLR+AE AE A D+ Q+V E LA +VT LE L+ F EEKMDDSSSLLQI+VTSAAEKNGEF+VPLS+ERL +LRQS+KIHRDQLDNNFLATVQAW+E+ KEEEM+GMVVILQKILQ+YAS+ IL P D ++TPA LLL+ IL DA++W G+L+ L+A G+GM GGVTK+GLLGA+QVAVE V+LQQENGSMAQRVQAEFLSELCKRIEAA P E+ PG+LE
Sbjct: 1 MSDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEQQRVKLENLATQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSMKIHRDQLDNNFLATVQAWMEKSGKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAGEADAAAPKKRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVTKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEAACP-EQPLGPGMLE 281
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A6S9G5L4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9G5L4_HETAK) HSP 1 Score: 177 bits (450), Expect = 1.610e-47 Identity = 107/276 (38.77%), Postives = 178/276 (64.49%), Query Frame = 2
Query: 245 RMSDPAGMDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKNGEFIVPLSQERLGSLRQSVKIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAAPQEER 1072
RMS + + +ID ++AA + + ++K +++VA P+FF+ IA+RA+ A D ++ A RLA E T L+ L+ E +MD + +++ IV SAAE +G+F+VPLS ER +++ ++ ++LD+NFL+TV W+++ + E++M+GMV ILQ++LQLYA+ A+ K G RR+ G+ P ++ L D +L++D E W G++ + + + L+GA+QVA+E+VV+QQENGSM+QRVQAEFL EL + ++ QE++
Sbjct: 48 RMSTNSDYEYIIDAMRAAKPEELPGI-IAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWMKKAE-EDKMDGMVGILQRVLQLYAANAL---KLGAPRRE----GEAPASSQ------LFDDLLDSDPELWRGLVRKGLVEERRC----SADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQVQEKK 304
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A6T8FN14_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8FN14_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.460e-42 Identity = 120/321 (37.38%), Postives = 183/321 (57.01%), Query Frame = 2
Query: 137 SSTLPIRVSCPAAARLRPWGRPGRSSPGPSN-----RFSGTR----MSDPAGMDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEK-NGEFIVPLSQERLGSLRQSV-KIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAAPQE 1066
S+T P+R+S P L S+P P + R G R +++ + +D +I +L AAP S L VSK+++ V+ P FFLRIAER +MA D +K LA + LE +++ E+ +DD++ ++ IV +AAE +GEF+VPL ER+ S+R+ + +I +LD FL T+ +W+ + ++ M+GMVVILQK+LQ+YA I + GD P +PA +L + +L D + W L + G+ + ++ E L+ +Q +E+VVL ENGSMAQRVQAE+L EL R+EA PQE
Sbjct: 27 STTRPLRISTPTTTTL-------HSTPTPDDIPSQSRLEGNRREPTIAEISIIDDMITKLLAAP-SHELPRVVSKAIRVVSSPRFFLRIAERTDMATSDAEKDKLSELAGNLVSTLEAVVSTTEKVLDDTALDVENIVKAAAEPLSGEFLVPLLPERIASMREVMDQIESPRLDEGFLTTIDSWMNK-SGQDGMDGMVVILQKVLQIYAGTVITRARNT---------GDAP-----SPAAVLFEELLNMDTDNWDFQLRNKIGEGEEL---LSSEALMAEIQRTIESVVLGLENGSMAQRVQAEYLRELITRVEAM-PQE 320
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S0XTZ8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XTZ8_HEMAN) HSP 1 Score: 162 bits (411), Expect = 1.060e-41 Identity = 119/312 (38.14%), Postives = 176/312 (56.41%), Query Frame = 2
Query: 137 SSTLPIRVSCPAAARLRPWGRPGRSSPGPSNRFSGTRMSDPAGMDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKNGEFIVPLSQERLGSLRQSVKIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAAPQEER 1072
SS LP R PAAA WG GR + R P D LI ++ P + + V+ +++ V+QP+FF++IAERA+ A D++ K LA V LE +M EEKMDD+S L+Q +++SAAE+NGEF VPL ER+ +R VK R+ +D LATV A++++ E++++G+V+ILQK+LQL+A+E ++ PG + +L+R+L + +W G+L A G+ E + AVQ VE VVLQQ +GS QRVQAEFL EL R++ P+E++
Sbjct: 52 SSFLPSRT--PAAA----WGSQGRRESKHALRMQVEADLTP---DELISKMLEVPAYEMPNI-VAANIKAVSQPSFFIKIAERADEA-DEEGKEKLSALADNVVATLEAVMARTEEKMDDASELVQTLLSSAAEENGEFDVPLKPERVAFMRAKVKEQRELIDEGILATVFAYMKKAN-EDQLDGLVLILQKLLQLWAAEELVAAGPGNE---------------------VLERLLLAEESEWDGLLQEAVAAGE-----TDTESMQSAVQSCVERVVLQQASGSHGQRVQAEFLRELLSRLKNT-PEEKK 324
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S1ZNW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNW5_TRICV) HSP 1 Score: 162 bits (411), Expect = 3.390e-41 Identity = 113/279 (40.50%), Postives = 167/279 (59.86%), Query Frame = 2
Query: 266 MDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKN-GEFIVPLSQERLGSLRQSVK-IHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVG--------GDLPDVTRQT------PAGLLLDRILETDAEQWSGILS-SLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEA 1051
MD +I +L A + L VSK+++ V+ P FFLRIAERA+M D +K L+ + LE +++ E+++D+ + +++ +V +AAE + GEF+VPLS ER+ ++R+++ I LD FL+TV AW+ + ++ M+GMV ILQK+LQLYA +E K R VG G +V + PA LL+R+++TD + W L SLAA + GGV+ + ++G VQ +E VVL ENGSMAQRVQAE+L EL RIEA
Sbjct: 99 MDDMITKLSNAKPYE-LPQAVSKAIRVVSSPRFFLRIAERADMTDDALEKAKLASLSENLVTTLEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNK-SHQDGMDGMVAILQKVLQLYAG---VEIKRARARLQASVGAAVSGQSQGQADEVVAEQEKGETPPAAALLERLMDTDPDSWDAELRRSLAAEQE--EGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIEA 370
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S2AZA7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZA7_9STRA) HSP 1 Score: 157 bits (397), Expect = 8.770e-41 Identity = 98/237 (41.35%), Postives = 144/237 (60.76%), Query Frame = 2
Query: 347 VAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKNGEFIVPLSQERLGSLRQSVKIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAA 1057
V+ P FF+RIAE ++ A +D+K+A LA + LE ++ EEK+D +S+LLQ I+ AAE +GEF+VPL+ + +LR++V +R LD++FL+TVQAW+ +C + +EGMV ILQ++LQLYAS ++ D V D + + LLD++ T ++ W +L G + + E LL VQ +ETVVL QE GS +QRVQAEFL EL +RI+ A
Sbjct: 3 VSSPTFFVRIAELSDAAKSEDEKMALSSLATNLVNTLEVIVQRTEEKVDGASTLLQEILAVAAEDDGEFMVPLAPAKAAALREAVLENRASLDDSFLSTVQAWMRKCT-DNGLEGMVTILQQVLQLYASSMLIA--------DDSVNAD----SEAASSAALLDKVFATSSDGWDALLRESLL---GDSPVCSSELLLAEVQARIETVVLAQEAGSYSQRVQAEFLRELSQRIQQLA 223
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S1FS16_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FS16_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.500e-39 Identity = 110/271 (40.59%), Postives = 162/271 (59.78%), Query Frame = 2
Query: 266 MDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAA-EKNGEFIVPLSQERLGSLRQSVK-IHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKP---GPKRRDPEVGGDLPDVTRQ-----TPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIE 1048
MD +ID L P + L VS++V+ V P FF+RIAER++ D K F LA + LE +++ EEK+D +S+ ++ I+ +AA E+ GEF VPL+ +++ + +++ I LD FL TV +++++ +K + ++GMVVILQK+LQLYA E I++ + G + G D DV + +P+ LLD+IL++D E W G+L S V+K LLG VQ +E VVL ENGSMAQRVQAEF+ EL RIE
Sbjct: 60 MDEMIDRLIDVPAYE-LPAAVSRAVRVVGSPLFFVRIAERSDEVKDSATKAKFSALADNIVRTLEVVVSTTEEKLDSNSADVEKIIKAAADEETGEFFVPLNFDQIQKMSAAIREIDPYNLDEGFLTTVDSYMDKSRK-DGLDGMVVILQKVLQLYAGEMIIKGRAENLGARVGATVSGLDPDDVVEEQQSTSSPSSDLLDKILKSDVELWDGLLDSSIGRKDS---DVSKPQLLGEVQRTMEAVVLGLENGSMAQRVQAEFMRELLMRIE 325
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S1ZMP8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMP8_TRICV) HSP 1 Score: 154 bits (390), Expect = 1.520e-39 Identity = 104/255 (40.78%), Postives = 154/255 (60.39%), Query Frame = 2
Query: 338 VQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKN-GEFIVPLSQERLGSLRQSVK-IHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVG--------GDLPDVTRQT------PAGLLLDRILETDAEQWSGILS-SLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEA 1051
++ V+ P FFLRIAERA+M D +K L+ + LE +++ E+++D+ + +++ +V +AAE + GEF+VPLS ER+ ++R+++ I LD FL+TV AW+ + ++ M+GMV ILQK+LQLYA +E K R VG G +V + PA LL+R+++TD + W L SLAA + GGV+ + ++G VQ +E VVL ENGSMAQRVQAE+L EL RIEA
Sbjct: 1 IRVVSPPRFFLRIAERADMTDDALEKAKLASLSENLVTTLEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNK-SHQDGMDGMVAILQKVLQLYAG---VEIKRARARLQASVGAAVSGQSQGQADEVVAEQEKGETPPAAALLERLMDTDPDSWDAELRRSLAAEQE--EGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIEA 249
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S4UFJ3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UFJ3_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.390e-38 Identity = 107/279 (38.35%), Postives = 166/279 (59.50%), Query Frame = 2
Query: 266 MDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAE-KNGEFIVPLSQERLGSLRQSV-KIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQ--------------TPAGLLLDRILETDAEQWSGIL-SSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEA 1051
MD +I +L A + L VS++V+ V+ P FFLRIAERA+MA D +K LA + LE +++ E+++D+ + ++ +V +AAE ++GEF+VPLS ER+ +++ ++ K+ LD FL+TV AW+ + ++ M+GMV ILQK+LQ+YA AI+ + + VG + +++ TPA LL++++ D + W L S++ A G G++ L+G VQ +E VVL ENGSMAQRVQAE+L EL RIEA
Sbjct: 82 MDDMITKLADAKPYE-LPNAVSRAVRVVSSPRFFLRIAERADMATSDIEKEKLSALAENLVSTLEAVLSTTEDRLDERAKEVESVVKAAAEPESGEFLVPLSAERVNAMQTTLRKLDPISLDEGFLSTVDAWMNK-SHQDGMDGMVGILQKVLQMYAGTAIVRAR---SQLQANVGAAVSGQSQEQADKVIAKEEEKGLTPAAALLEKLMAMDTDLWDAELRSNITAEG-----GISPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIEA 350
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S2MXS5_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MXS5_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.960e-37 Identity = 103/278 (37.05%), Postives = 163/278 (58.63%), Query Frame = 2
Query: 266 MDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKN-GEFIVPLSQERLGSLRQSV-KIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQ--------------TPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEA 1051
MD +I +L A + L VS++++ ++ P FFLRIAERA+MA DD +K LA + L+ +++ E+++D+ + ++ +V +AAE + GEF+VPL+ ER+G++++++ K+ LD FL+TV AW+ + ++ M+GMV ILQK+LQ+YA AI + + VG + T++ +PA L+ +++ D + W L S G G ++ L+G VQ +E VVL ENGSMAQRVQAE+L EL RIEA
Sbjct: 85 MDDMITKLADAKPYE-LPNAVSRAIRVISSPRFFLRIAERADMATDDVEKEKLSALAENLVSTLDAVVSTTEDRLDERAKEVESVVKAAAEPDSGEFLVPLTPERVGAMQKTLRKLDPVSLDEGFLSTVDAWMNK-SHQDGMDGMVEILQKVLQIYAGTAITRARA---QLQANVGAAVSGQTQEQADEVLAQEEEKGPSPAASFLEELMKMDTDLWDSELRSTI----GAEGELSPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIEA 353 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1219.1704.1 >prot_F-serratus_M_contig1219.1704.1 ID=prot_F-serratus_M_contig1219.1704.1|Name=mRNA_F-serratus_M_contig1219.1704.1|organism=Fucus serratus male|type=polypeptide|length=357bp MTNLTLGALSVVFAATRAKAFLPPSLPPSALASSRSCSSTLPIRVSCPAAback to top mRNA from alignment at F-serratus_M_contig1219:215060..220415- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1219.1704.1 ID=mRNA_F-serratus_M_contig1219.1704.1|Name=mRNA_F-serratus_M_contig1219.1704.1|organism=Fucus serratus male|type=mRNA|length=5356bp|location=Sequence derived from alignment at F-serratus_M_contig1219:215060..220415- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1219:215060..220415- >mRNA_F-serratus_M_contig1219.1704.1 ID=mRNA_F-serratus_M_contig1219.1704.1|Name=mRNA_F-serratus_M_contig1219.1704.1|organism=Fucus serratus male|type=CDS|length=2142bp|location=Sequence derived from alignment at F-serratus_M_contig1219:215060..220415- (Fucus serratus male)back to top |