mRNA_F-serratus_M_contig1219.1704.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1219.1704.1
Unique NamemRNA_F-serratus_M_contig1219.1704.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: D7FX94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX94_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 2.200e-117
Identity = 194/282 (68.79%), Postives = 227/282 (80.50%), Query Frame = 2
Query:  248 MSDPAGMDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKNGEFIVPLSQERLGSLRQSVKIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAAPQEERPPPGILE 1093
            MSD AGMDT+I++LK APD + LTLKVSK VQQVAQPAFFLR+AE AE A D+ Q+V  E LA +VT  LE L+ F EEKMDDSSSLLQI+VTSAAEKNGEF+VPLS+ERL +LRQS+KIHRDQLDNNFLATVQAW+E+  KEEEM+GMVVILQKILQ+YAS+ IL     P         D     ++TPA LLL+ IL  DA++W G+L+ L+A G+GM GGVTK+GLLGA+QVAVE V+LQQENGSMAQRVQAEFLSELCKRIEAA P E+   PG+LE
Sbjct:    1 MSDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEQQRVKLENLATQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSMKIHRDQLDNNFLATVQAWMEKSGKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAGEADAAAPKKRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVTKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEAACP-EQPLGPGMLE 281          
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A6S9G5L4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9G5L4_HETAK)

HSP 1 Score: 177 bits (450), Expect = 1.610e-47
Identity = 107/276 (38.77%), Postives = 178/276 (64.49%), Query Frame = 2
Query:  245 RMSDPAGMDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKNGEFIVPLSQERLGSLRQSVKIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAAPQEER 1072
            RMS  +  + +ID ++AA   +   + ++K +++VA P+FF+ IA+RA+ A  D ++ A  RLA E T  L+ L+   E +MD +  +++ IV SAAE +G+F+VPLS ER  +++  ++   ++LD+NFL+TV  W+++ + E++M+GMV ILQ++LQLYA+ A+   K G  RR+    G+ P  ++      L D +L++D E W G++       +      + + L+GA+QVA+E+VV+QQENGSM+QRVQAEFL EL + ++    QE++
Sbjct:   48 RMSTNSDYEYIIDAMRAAKPEELPGI-IAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATEATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWMKKAE-EDKMDGMVGILQRVLQLYAANAL---KLGAPRRE----GEAPASSQ------LFDDLLDSDPELWRGLVRKGLVEERRC----SADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVKEIQVQEKK 304          
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A6T8FN14_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8FN14_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.460e-42
Identity = 120/321 (37.38%), Postives = 183/321 (57.01%), Query Frame = 2
Query:  137 SSTLPIRVSCPAAARLRPWGRPGRSSPGPSN-----RFSGTR----MSDPAGMDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEK-NGEFIVPLSQERLGSLRQSV-KIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAAPQE 1066
            S+T P+R+S P    L        S+P P +     R  G R    +++ + +D +I +L AAP S  L   VSK+++ V+ P FFLRIAER +MA  D +K     LA  +   LE +++  E+ +DD++  ++ IV +AAE  +GEF+VPL  ER+ S+R+ + +I   +LD  FL T+ +W+ +   ++ M+GMVVILQK+LQ+YA   I   +           GD P     +PA +L + +L  D + W   L +    G+ +   ++ E L+  +Q  +E+VVL  ENGSMAQRVQAE+L EL  R+EA  PQE
Sbjct:   27 STTRPLRISTPTTTTL-------HSTPTPDDIPSQSRLEGNRREPTIAEISIIDDMITKLLAAP-SHELPRVVSKAIRVVSSPRFFLRIAERTDMATSDAEKDKLSELAGNLVSTLEAVVSTTEKVLDDTALDVENIVKAAAEPLSGEFLVPLLPERIASMREVMDQIESPRLDEGFLTTIDSWMNK-SGQDGMDGMVVILQKVLQIYAGTVITRARNT---------GDAP-----SPAAVLFEELLNMDTDNWDFQLRNKIGEGEEL---LSSEALMAEIQRTIESVVLGLENGSMAQRVQAEYLRELITRVEAM-PQE 320          
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S0XTZ8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XTZ8_HEMAN)

HSP 1 Score: 162 bits (411), Expect = 1.060e-41
Identity = 119/312 (38.14%), Postives = 176/312 (56.41%), Query Frame = 2
Query:  137 SSTLPIRVSCPAAARLRPWGRPGRSSPGPSNRFSGTRMSDPAGMDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKNGEFIVPLSQERLGSLRQSVKIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAAPQEER 1072
            SS LP R   PAAA    WG  GR     + R        P   D LI ++   P  +   + V+ +++ V+QP+FF++IAERA+ A D++ K     LA  V   LE +M   EEKMDD+S L+Q +++SAAE+NGEF VPL  ER+  +R  VK  R+ +D   LATV A++++   E++++G+V+ILQK+LQL+A+E ++   PG +                     +L+R+L  +  +W G+L    A G+        E +  AVQ  VE VVLQQ +GS  QRVQAEFL EL  R++   P+E++
Sbjct:   52 SSFLPSRT--PAAA----WGSQGRRESKHALRMQVEADLTP---DELISKMLEVPAYEMPNI-VAANIKAVSQPSFFIKIAERADEA-DEEGKEKLSALADNVVATLEAVMARTEEKMDDASELVQTLLSSAAEENGEFDVPLKPERVAFMRAKVKEQRELIDEGILATVFAYMKKAN-EDQLDGLVLILQKLLQLWAAEELVAAGPGNE---------------------VLERLLLAEESEWDGLLQEAVAAGE-----TDTESMQSAVQSCVERVVLQQASGSHGQRVQAEFLRELLSRLKNT-PEEKK 324          
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S1ZNW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNW5_TRICV)

HSP 1 Score: 162 bits (411), Expect = 3.390e-41
Identity = 113/279 (40.50%), Postives = 167/279 (59.86%), Query Frame = 2
Query:  266 MDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKN-GEFIVPLSQERLGSLRQSVK-IHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVG--------GDLPDVTRQT------PAGLLLDRILETDAEQWSGILS-SLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEA 1051
            MD +I +L  A   + L   VSK+++ V+ P FFLRIAERA+M  D  +K     L+  +   LE +++  E+++D+ + +++ +V +AAE + GEF+VPLS ER+ ++R+++  I    LD  FL+TV AW+ +   ++ M+GMV ILQK+LQLYA    +E K    R    VG        G   +V  +       PA  LL+R+++TD + W   L  SLAA  +   GGV+ + ++G VQ  +E VVL  ENGSMAQRVQAE+L EL  RIEA
Sbjct:   99 MDDMITKLSNAKPYE-LPQAVSKAIRVVSSPRFFLRIAERADMTDDALEKAKLASLSENLVTTLEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNK-SHQDGMDGMVAILQKVLQLYAG---VEIKRARARLQASVGAAVSGQSQGQADEVVAEQEKGETPPAAALLERLMDTDPDSWDAELRRSLAAEQE--EGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIEA 370          
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S2AZA7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZA7_9STRA)

HSP 1 Score: 157 bits (397), Expect = 8.770e-41
Identity = 98/237 (41.35%), Postives = 144/237 (60.76%), Query Frame = 2
Query:  347 VAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKNGEFIVPLSQERLGSLRQSVKIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAA 1057
            V+ P FF+RIAE ++ A  +D+K+A   LA  +   LE ++   EEK+D +S+LLQ I+  AAE +GEF+VPL+  +  +LR++V  +R  LD++FL+TVQAW+ +C  +  +EGMV ILQ++LQLYAS  ++         D  V  D    +    +  LLD++  T ++ W  +L        G +   + E LL  VQ  +ETVVL QE GS +QRVQAEFL EL +RI+  A
Sbjct:    3 VSSPTFFVRIAELSDAAKSEDEKMALSSLATNLVNTLEVIVQRTEEKVDGASTLLQEILAVAAEDDGEFMVPLAPAKAAALREAVLENRASLDDSFLSTVQAWMRKCT-DNGLEGMVTILQQVLQLYASSMLIA--------DDSVNAD----SEAASSAALLDKVFATSSDGWDALLRESLL---GDSPVCSSELLLAEVQARIETVVLAQEAGSYSQRVQAEFLRELSQRIQQLA 223          
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S1FS16_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FS16_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.500e-39
Identity = 110/271 (40.59%), Postives = 162/271 (59.78%), Query Frame = 2
Query:  266 MDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAA-EKNGEFIVPLSQERLGSLRQSVK-IHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKP---GPKRRDPEVGGDLPDVTRQ-----TPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIE 1048
            MD +ID L   P  + L   VS++V+ V  P FF+RIAER++   D   K  F  LA  +   LE +++  EEK+D +S+ ++ I+ +AA E+ GEF VPL+ +++  +  +++ I    LD  FL TV +++++ +K + ++GMVVILQK+LQLYA E I++ +    G +      G D  DV  +     +P+  LLD+IL++D E W G+L S           V+K  LLG VQ  +E VVL  ENGSMAQRVQAEF+ EL  RIE
Sbjct:   60 MDEMIDRLIDVPAYE-LPAAVSRAVRVVGSPLFFVRIAERSDEVKDSATKAKFSALADNIVRTLEVVVSTTEEKLDSNSADVEKIIKAAADEETGEFFVPLNFDQIQKMSAAIREIDPYNLDEGFLTTVDSYMDKSRK-DGLDGMVVILQKVLQLYAGEMIIKGRAENLGARVGATVSGLDPDDVVEEQQSTSSPSSDLLDKILKSDVELWDGLLDSSIGRKDS---DVSKPQLLGEVQRTMEAVVLGLENGSMAQRVQAEFMRELLMRIE 325          
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S1ZMP8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMP8_TRICV)

HSP 1 Score: 154 bits (390), Expect = 1.520e-39
Identity = 104/255 (40.78%), Postives = 154/255 (60.39%), Query Frame = 2
Query:  338 VQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKN-GEFIVPLSQERLGSLRQSVK-IHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVG--------GDLPDVTRQT------PAGLLLDRILETDAEQWSGILS-SLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEA 1051
            ++ V+ P FFLRIAERA+M  D  +K     L+  +   LE +++  E+++D+ + +++ +V +AAE + GEF+VPLS ER+ ++R+++  I    LD  FL+TV AW+ +   ++ M+GMV ILQK+LQLYA    +E K    R    VG        G   +V  +       PA  LL+R+++TD + W   L  SLAA  +   GGV+ + ++G VQ  +E VVL  ENGSMAQRVQAE+L EL  RIEA
Sbjct:    1 IRVVSPPRFFLRIAERADMTDDALEKAKLASLSENLVTTLEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNK-SHQDGMDGMVAILQKVLQLYAG---VEIKRARARLQASVGAAVSGQSQGQADEVVAEQEKGETPPAAALLERLMDTDPDSWDAELRRSLAAEQE--EGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIEA 249          
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S4UFJ3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UFJ3_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.390e-38
Identity = 107/279 (38.35%), Postives = 166/279 (59.50%), Query Frame = 2
Query:  266 MDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAE-KNGEFIVPLSQERLGSLRQSV-KIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQ--------------TPAGLLLDRILETDAEQWSGIL-SSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEA 1051
            MD +I +L  A   + L   VS++V+ V+ P FFLRIAERA+MA  D +K     LA  +   LE +++  E+++D+ +  ++ +V +AAE ++GEF+VPLS ER+ +++ ++ K+    LD  FL+TV AW+ +   ++ M+GMV ILQK+LQ+YA  AI+  +    +    VG  +   +++              TPA  LL++++  D + W   L S++ A G     G++   L+G VQ  +E VVL  ENGSMAQRVQAE+L EL  RIEA
Sbjct:   82 MDDMITKLADAKPYE-LPNAVSRAVRVVSSPRFFLRIAERADMATSDIEKEKLSALAENLVSTLEAVLSTTEDRLDERAKEVESVVKAAAEPESGEFLVPLSAERVNAMQTTLRKLDPISLDEGFLSTVDAWMNK-SHQDGMDGMVGILQKVLQMYAGTAIVRAR---SQLQANVGAAVSGQSQEQADKVIAKEEEKGLTPAAALLEKLMAMDTDLWDAELRSNITAEG-----GISPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIEA 350          
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Match: A0A7S2MXS5_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MXS5_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.960e-37
Identity = 103/278 (37.05%), Postives = 163/278 (58.63%), Query Frame = 2
Query:  266 MDTLIDELKAAPDSDTLTLKVSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNFVEEKMDDSSSLLQIIVTSAAEKN-GEFIVPLSQERLGSLRQSV-KIHRDQLDNNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRDPEVGGDLPDVTRQ--------------TPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVTKEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEA 1051
            MD +I +L  A   + L   VS++++ ++ P FFLRIAERA+MA DD +K     LA  +   L+ +++  E+++D+ +  ++ +V +AAE + GEF+VPL+ ER+G++++++ K+    LD  FL+TV AW+ +   ++ M+GMV ILQK+LQ+YA  AI   +    +    VG  +   T++              +PA   L+ +++ D + W   L S      G  G ++   L+G VQ  +E VVL  ENGSMAQRVQAE+L EL  RIEA
Sbjct:   85 MDDMITKLADAKPYE-LPNAVSRAIRVISSPRFFLRIAERADMATDDVEKEKLSALAENLVSTLDAVVSTTEDRLDERAKEVESVVKAAAEPDSGEFLVPLTPERVGAMQKTLRKLDPVSLDEGFLSTVDAWMNK-SHQDGMDGMVEILQKVLQIYAGTAITRARA---QLQANVGAAVSGQTQEQADEVLAQEEEKGPSPAASFLEELMKMDTDLWDSELRSTI----GAEGELSPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIEA 353          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1219.1704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX94_ECTSI2.200e-11768.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S9G5L4_HETAK1.610e-4738.77Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6T8FN14_9STRA2.460e-4237.38Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S0XTZ8_HEMAN1.060e-4138.14Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1ZNW5_TRICV3.390e-4140.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2AZA7_9STRA8.770e-4141.35Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1FS16_9STRA1.500e-3940.59Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1ZMP8_TRICV1.520e-3940.78Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4UFJ3_9STRA1.390e-3838.35Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2MXS5_9STRA1.960e-3737.05Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1219contigF-serratus_M_contig1219:215060..220415 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score363.6
Seed ortholog evalue1e-97
Seed eggNOG ortholog2880.D7FX94
Hectar predicted targeting categorychloroplast
EggNOG free text desc.isoform X1
EggNOG OGs28HUF@1,2QQ5J@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_004040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1742
Cds size1071
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1219.1704.1prot_F-serratus_M_contig1219.1704.1Fucus serratus malepolypeptideF-serratus_M_contig1219 215706..220390 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929137.8334162-UTR-F-serratus_M_contig1219:215059..2157051622929137.8334162-UTR-F-serratus_M_contig1219:215059..215705Fucus serratus maleUTRF-serratus_M_contig1219 215060..215705 -
1690962720.554161-UTR-F-serratus_M_contig1219:215059..2157051690962720.554161-UTR-F-serratus_M_contig1219:215059..215705Fucus serratus maleUTRF-serratus_M_contig1219 215060..215705 -
1622929137.959907-UTR-F-serratus_M_contig1219:220390..2204151622929137.959907-UTR-F-serratus_M_contig1219:220390..220415Fucus serratus maleUTRF-serratus_M_contig1219 220391..220415 -
1690962720.6720665-UTR-F-serratus_M_contig1219:220390..2204151690962720.6720665-UTR-F-serratus_M_contig1219:220390..220415Fucus serratus maleUTRF-serratus_M_contig1219 220391..220415 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929137.8447196-CDS-F-serratus_M_contig1219:215705..2158491622929137.8447196-CDS-F-serratus_M_contig1219:215705..215849Fucus serratus maleCDSF-serratus_M_contig1219 215706..215849 -
1690962720.5653372-CDS-F-serratus_M_contig1219:215705..2158491690962720.5653372-CDS-F-serratus_M_contig1219:215705..215849Fucus serratus maleCDSF-serratus_M_contig1219 215706..215849 -
1622929137.8596663-CDS-F-serratus_M_contig1219:216411..2166511622929137.8596663-CDS-F-serratus_M_contig1219:216411..216651Fucus serratus maleCDSF-serratus_M_contig1219 216412..216651 -
1690962720.5747948-CDS-F-serratus_M_contig1219:216411..2166511690962720.5747948-CDS-F-serratus_M_contig1219:216411..216651Fucus serratus maleCDSF-serratus_M_contig1219 216412..216651 -
1622929137.8696759-CDS-F-serratus_M_contig1219:217253..2173281622929137.8696759-CDS-F-serratus_M_contig1219:217253..217328Fucus serratus maleCDSF-serratus_M_contig1219 217254..217328 -
1690962720.5837977-CDS-F-serratus_M_contig1219:217253..2173281690962720.5837977-CDS-F-serratus_M_contig1219:217253..217328Fucus serratus maleCDSF-serratus_M_contig1219 217254..217328 -
1622929137.8813334-CDS-F-serratus_M_contig1219:217856..2179651622929137.8813334-CDS-F-serratus_M_contig1219:217856..217965Fucus serratus maleCDSF-serratus_M_contig1219 217857..217965 -
1690962720.5972195-CDS-F-serratus_M_contig1219:217856..2179651690962720.5972195-CDS-F-serratus_M_contig1219:217856..217965Fucus serratus maleCDSF-serratus_M_contig1219 217857..217965 -
1622929137.8912394-CDS-F-serratus_M_contig1219:218244..2183301622929137.8912394-CDS-F-serratus_M_contig1219:218244..218330Fucus serratus maleCDSF-serratus_M_contig1219 218245..218330 -
1690962720.6108255-CDS-F-serratus_M_contig1219:218244..2183301690962720.6108255-CDS-F-serratus_M_contig1219:218244..218330Fucus serratus maleCDSF-serratus_M_contig1219 218245..218330 -
1622929137.9011374-CDS-F-serratus_M_contig1219:218683..2187991622929137.9011374-CDS-F-serratus_M_contig1219:218683..218799Fucus serratus maleCDSF-serratus_M_contig1219 218684..218799 -
1690962720.626879-CDS-F-serratus_M_contig1219:218683..2187991690962720.626879-CDS-F-serratus_M_contig1219:218683..218799Fucus serratus maleCDSF-serratus_M_contig1219 218684..218799 -
1622929137.9130628-CDS-F-serratus_M_contig1219:219752..2198281622929137.9130628-CDS-F-serratus_M_contig1219:219752..219828Fucus serratus maleCDSF-serratus_M_contig1219 219753..219828 -
1690962720.6386676-CDS-F-serratus_M_contig1219:219752..2198281690962720.6386676-CDS-F-serratus_M_contig1219:219752..219828Fucus serratus maleCDSF-serratus_M_contig1219 219753..219828 -
1622929137.9256651-CDS-F-serratus_M_contig1219:220165..2203901622929137.9256651-CDS-F-serratus_M_contig1219:220165..220390Fucus serratus maleCDSF-serratus_M_contig1219 220166..220390 -
1690962720.6505103-CDS-F-serratus_M_contig1219:220165..2203901690962720.6505103-CDS-F-serratus_M_contig1219:220165..220390Fucus serratus maleCDSF-serratus_M_contig1219 220166..220390 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1219.1704.1

>prot_F-serratus_M_contig1219.1704.1 ID=prot_F-serratus_M_contig1219.1704.1|Name=mRNA_F-serratus_M_contig1219.1704.1|organism=Fucus serratus male|type=polypeptide|length=357bp
MTNLTLGALSVVFAATRAKAFLPPSLPPSALASSRSCSSTLPIRVSCPAA
ARLRPWGRPGRSSPGPSNRFSGTRMSDPAGMDTLIDELKAAPDSDTLTLK
VSKSVQQVAQPAFFLRIAERAEMAPDDDQKVAFERLAAEVTGALENLMNF
VEEKMDDSSSLLQIIVTSAAEKNGEFIVPLSQERLGSLRQSVKIHRDQLD
NNFLATVQAWLERCKKEEEMEGMVVILQKILQLYASEAILERKPGPKRRD
PEVGGDLPDVTRQTPAGLLLDRILETDAEQWSGILSSLAAPGKGMAGGVT
KEGLLGAVQVAVETVVLQQENGSMAQRVQAEFLSELCKRIEAAAPQEERP
PPGILE*
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mRNA from alignment at F-serratus_M_contig1219:215060..220415-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1219.1704.1 ID=mRNA_F-serratus_M_contig1219.1704.1|Name=mRNA_F-serratus_M_contig1219.1704.1|organism=Fucus serratus male|type=mRNA|length=5356bp|location=Sequence derived from alignment at F-serratus_M_contig1219:215060..220415- (Fucus serratus male)
CTCCACGCAAGATTGAAGCTGCCTTATGACGAATCTGACACTGGGAGCGC TCTCCGTGGTCTTCGCTGCGACAAGAGCGAAGGCGTTTTTACCACCTAGC CTTCCTCCCTCAGCCTTAGCATCGTCTCGGTCTTGCTCCTCGACCCTTCC AATTCGAGTCTCGTGTCCTGCCGCGGCAAGACTACGCCCATGGGGAAGGC CAGGGCGATCGTCGCCCGGCCCCTCGAATCGGTTTTCCGGAACCCGCATG GTGGGTGCATTCAGTCTGTATTGCCTCGCTTTCTCGTCTGCGTGCGTGCT CCGAGGGAGCCCCACGGATCGCTTTTGTACTTGTGGAGCAATCATTTTAG TTACACGCGGTTTGAATTACATAGAAAACTACTGCTGTATGCACCAAGAA CATGAGTCTGAGATTGACCGCTGACGCGACCCTGTGCAGATACTGGATAT ATATACCCATGACGGGAATCCGGCCCTTGTAACTATAGATCGCCGGTCGC CTCTCGCGTCCCGTCCTATTCCTAACCACGCTGCTGTACAACACGCGAAT CCCGTCGCCCTGAAACGGTGTGCGACCGGTAGTGCAGTCCGATCCCGCGG GCATGGACACATTGATCGACGAACTGAAGGCAGCTCCTGACTCTGACACG CTGACCCTCAAAGGTATTATATGTAGACTATTAAATAGACTATTAATTAT ACTAATAATAGTAAGGGTATGGCGATTTGGCCCACCGGTGGACTATTCTC TTGTTTACCCCCCCACCTGGATCTCGCGTCATAAGACTTGGTTGGTCACA GTACATGCATGGGTGTGTTAGGGTTAGGGTTAGCTATTATCGGGTCTATC GTGCAGTCCAAACGGTTCCGTCTACGTGCTACCCCGGCCGGTGAGGTGGT TGGTGTTTTCTGGTATGTATGGCTATTTGCCCTTACAAACCAGAAAACAC CAAGCACCCCACCGGCCGTAACATCACGTAGACAGGACCGTTTGGGCTGC ACGAATGACCCCATGATAGCCCTGCAACGCTCCAACACACTCGTGCATGT ATTGTGACCAACCGTGTCTTCTGACGCGAGATCCAGGTGGTGGGGTAAAT TTGGGTATAGTCCACCGGTGGGGCAAATAGCCATTCCCTAAAAGTAACTG CATCGCTTTTCTTCTCATCATTTTTGTCTTGCAGCCCAGATCAAGAATCT AGAATCTAGAATCTAGGGGACTCGAGTGCTCACACACGGGATAACGGAGT GCGCACCGTATGGAAGAGGAGATCTGTTTGGATGCAGAAGAAAAAAAAAG GGGGCAGCCCAGAGATTTCTTGATTACGTACCACATGGCAGATTCGCCTC CTCCAAGTCTTACCCTTTAAAACGAACGCAGGAGTGTTGCGGCGGTTATA GAATGATGACCTTCGAGATTCCACATAAAAGCTCCAGCGTAGTAAGTAAT ATGTCGTCCGCGAACGCCTTGCCTCTCCGAAGTCACGTTTCACCCTGAAG CTCGCCGCTATGTCACGTTGACAAATCAACAATGTTCTAATGATGAGTAA TCAAGTGCCTCTCTCTCGTCGCCCTCCTTATTTCCCATCGTGTTGGCACA TTATTGCTAATAATAGTGTCCAAGAGCGTCCAACAAGTGGCGCAGCCCGC GTTTTTCCTGCGGATCGCGGAGCGGGCGGAAATGGCGCCGGACGATGACC AGAAAGTCGCCTTCGAGAGACTTGCAGCTGAGGTTCGTGGCGCACTTGGG AGCGCTCGACTTTAACACCGGAAGAGCTCCGCAACTCTTTGAGCCCTGCG GGTATAGATAATTGGGTACCGTGCTGTATATTAAACTCGATGTAAGGTGG GTATGGTAATGGAGATGTCTAAACGCTTGGCTTGTGGTCCGCAGCAGGAG GTTTGGCATCGGGACGGGAAAGAGTCGAGCGGGGGCATATCCGTAGCCAT CCCCGCCCCTCGGTACTACTAAAGTAGAGCCCCCCTCCCTCCCCTCGTCC CGCGTTTTCCTCGTGTGTTGGGTTGGGTTATGTTCCCTCCTGGTTTGCCT TTTGTGCTGCCGCGCGTTTAATCGCCCGTCGAAAGGTCACCGGCGCCCTT GAAAATCTTATGAACTTCGTGGAAGAAAAGATGGATGACTCGTCTTCCCT CTTGCAGATCATCGTCACGAGGTGAGGATGGGTGGGGGGGGGTCGTTATC TAAGCGTTCCTTGCAGGTTCACCATTCTGGAGGGCTCGCACAACGTACAC TCTGAGCGTATTCATAACGGGTTTCCTCTTGGCAGGAGGCGTGCTGGGGG GCATACAGCTTCGGTCCTGCAGCAGTAGCCTATCGACCGCATTACTTGTT ACCGTGCCTAAAATTGATTCTGATTCGTTAGTCTTATTTTTTCTTTGGGC CGGGGGATGGGGGGAGGGGTTTACTCATCCATTTCTTTTCTGTTTCGCAG CGCTGCCGAGAAAAATGGGGAGTTCATTGTTCCCTTGTCTCAGGAACGCC TCGGGTCCCTCCGACAGAGCGTCAAGATCCATCGAGACCAACTCGACAAC AACTTCCTCGTGAGCTGCCTCGCCCGTACGTAGTCCGCACGGACGATACT GCGATGCCCTCTGCTCTGTTCCCCCGCTGATGCACACACAGTCCGTGCCT CCCTGCACGTGGCGCCCCACGGTCGCCTCGTTCCCAAACCTTCCTTGGTA TGCATCATAGCTTCGCCGCCTACAGTGTAGAAAGCCCGCATGCAGAGTGT TTCAAACAAGCGTCGCGGAGCGATAACCTCCTCAGCTCCCCGCCCCTGCC AGCTTGCATTCTATAGCGCGCGATTTCAGTGCATGCAAGCTGTTGTAAGT TTGGTCCAGCGTTCGACCTTTTCATTGGCATACATGAATGTCTTACAAGT CGTACAACACGGCATTACCTTTGTCGCCGCTGCCCTCGTACGTTTTTTCG CCTTCTTCTTGGACGCGTTCGGGTGGTGCGTTGGGTTTTGCGTGATGTGG CGATAAAACCGATACAACGGCTCCGGTCGGTCGCTCGGCCGCTCGGCCTG CCGGTTGCTTGGGTACGTCGGGGGGGGGGGCGCGAAGGCCACCGTTCAAG CGTGGTTGGAGAGGTGTAAAAAGGAGGAGGAGATGGAGGGCATGGTCGTC ATCCTGCAGAAGGTCTGTGCCGCGGGGACTGAAGCTATCCTTAGACAGAG AAGCTAGCCAAGGATTACTAAACGGAGGCACCACGCGGCTTGCGATTCTT ACCTTTCATCGTGGCGGTACCTCCGTGTGCTGTGCCCTGTGTCTCGGGGG GGGGGGGGAATAAGGGGTGGGGAGGGGGGATGGCGAAGGAAAAAGTGGTT CCAATAGGTTTGCCGAGCCTCGGTCGCACGGGGTCCCGTATCCGCCACAG TCGATCCCCGGGTTTCAATCTATATATGGGTGATGCTTTTCGTCATCGGA TCGATTGCGTCTCCGCGGACTCTTTTTCCTCATTCTAACCCATCGAGAAA ACTTGATAGTGTTTTGTGCGGGTCGGGGCAATAACGAACCGCGCAAACAC GGAATGCACCCGTCAGTTACTGTAACTAGGAGCCACGTTAGCGTGCTGTC GACGGGAGTTGCTTGTCCTTTCTAACCCTACTCCATGTCGCGGGCTTGGA AGCTTGGGCCACCCCGCGTGTCGCCGCCGACAAGCTCAGGTCATCCAGAG GGTCTCGCCCTTCGCACACAAATCGCCTCTGCTTTCGCTACCCGCTCCCC CCATGTCGCGGCAGATTCTTCAACTGTACGCATCGGAGGCGATCCTGGAG AGAAAACCCGGGCCGAAGCGAAGAGACCCGGAGGTGGGAGGTGATCTTCC CGATGTGACGAGGCAAACGCCCGCCGGTCTGCTCCTCGACAGGATACTGG AGACGGACGCCGAACAGTGGAGCGGGATACTGAGCAGTCTGGCGGCTCCT GGGAAGGGTATGGCAGGCGGCGTGACCAAGGAAGGTCTCTTGGGGGCCGT GCAGGTGGGGTATCGTGATGTGTTAATTGTCCTGACATCCTCCACCTTAT GGAACTCCGCGCGGGCATCGGACGTGGCGCTTTTGACATCAAGACGACGA TGAGGATATCGGGCGGAAATCGCGAGGTCGCTCAAAAGTTGATTAGCGAA GACTAAGGGGATCGGACGGAAATCGCGAGATCGGCCGCTCTCTCAAACGT TTACGAGAGACTACCAAGTGTTGTCGAACCCCGCCTTTTGGTGGCGCGGC GCGATGATAAACTTGTTTTGTCTTTTTTGTTGTTCTCCTTTTACCCGTTC TCGACATGACCGTCAACCCGCGCCTCTTCGAGGGTGTCTTTCGTACGTTC CTCGCGGAACCCTTTCCTCCCCTCCTTCCTTGCGCGTTTCTGAAGCCTAA ATTCGCCTTCCATTGCTCGGGGCTGTAGACAGACTTGCGAAGAATGACGT TCCTCCATCCTCATCTCTGCAACATCAACCAAAGCAAGTACCATACGTAT CTTCGACGCCAACTGAATGAAGTCGACCGCCCGGGCGTGCCTCTTTTTTT TTTCCCTTGCCCACAGGTGGCTGTAGAGACGGTGGTCCTACAGCAGGAGA ATGGCAGCATGGCCCAGCGGGTGCAGGCCGAGTTTCTCTCGGAGCTGTGC AAGCGAATAGAGGCCGCCGCGCCGCAAGAGGAGCGTCCACCGCCGGGCAT CCTCGAGTGATACCACCTTTTTCGTTTCCTGTTTTCCTTAAGCGTGGATG GATGGGATGGACAGACCGACGGCGACCAACCTGGGTGCAAAAAAAAGAGT GCATCAGCCTAAAAGCCCTGTTTTGCGTGAAGTTCAATCGAGCCACGGCG AAAGATTTGTCGAGTTGAACCAAATATTCAGGCGGTTTATGAGCAATGAT ACACCGCGCGATGGTGCTCCAAAGTACACGTACAGTCTAAGGACGCGGGC CCGAGATTCGGAGCGGAAGCGTTACTATAGCAGTATTAATAGTGTTAGTA GCGGTGAGCGACCACCATGCTACCAAGCGTCTGGACAGTTGGCCTCCAGC GAAACGAACAAAACGTTCTTAAGTACAGTCAAGAGGGGAGCAAGGACATA TTGGCTTGGATTAAGAACTCGCCATTTGGTTTTGCTCTTATCGGGGCGGA GGCACGCGACACCTAACTAACTGGACACTATTAAGCGTGCATGTTTTGGA AGGGACCACCAAAGGGAGGTAGGCCACATGCAGCCTGAGGAGGCGTTCTG GTTTTCAGTGATGATGAAAAGCATCGTCGGGTCATTCTCGGTGGTAATTT TATATGAGAAATGGAGAGACCGAAAATTCATCGAACAGCTAATAAAAAAA CTAAAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1219:215060..220415-

>mRNA_F-serratus_M_contig1219.1704.1 ID=mRNA_F-serratus_M_contig1219.1704.1|Name=mRNA_F-serratus_M_contig1219.1704.1|organism=Fucus serratus male|type=CDS|length=2142bp|location=Sequence derived from alignment at F-serratus_M_contig1219:215060..220415- (Fucus serratus male)
ATGACGAATCTGACACTGGGAGCGCTCTCCGTGGTCTTCGCTGCGACAAG
AGCGAAGGCGTTTTTACCACCTAGCCTTCCTCCCTCAGCCTTAGCATCGT
CTCGGTCTTGCTCCTCGACCCTTCCAATTCGAGTCTCGTGTCCTGCCGCG
GCAAGACTACGCCCATGGGGAAGGCCAGGGCGATCGTCGCCCGGCCCCTC
GAATCGGTTTTCCGGAACCCGCATGATGACGAATCTGACACTGGGAGCGC
TCTCCGTGGTCTTCGCTGCGACAAGAGCGAAGGCGTTTTTACCACCTAGC
CTTCCTCCCTCAGCCTTAGCATCGTCTCGGTCTTGCTCCTCGACCCTTCC
AATTCGAGTCTCGTGTCCTGCCGCGGCAAGACTACGCCCATGGGGAAGGC
CAGGGCGATCGTCGCCCGGCCCCTCGAATCGGTTTTCCGGAACCCGCATG
TCCGATCCCGCGGGCATGGACACATTGATCGACGAACTGAAGGCAGCTCC
TGACTCTGACACGCTGACCCTCAAAGTCCGATCCCGCGGGCATGGACACA
TTGATCGACGAACTGAAGGCAGCTCCTGACTCTGACACGCTGACCCTCAA
AGTGTCCAAGAGCGTCCAACAAGTGGCGCAGCCCGCGTTTTTCCTGCGGA
TCGCGGAGCGGGCGGAAATGGCGCCGGACGATGACCAGAAAGTCGCCTTC
GAGAGACTTGCAGCTGAGTGTCCAAGAGCGTCCAACAAGTGGCGCAGCCC
GCGTTTTTCCTGCGGATCGCGGAGCGGGCGGAAATGGCGCCGGACGATGA
CCAGAAAGTCGCCTTCGAGAGACTTGCAGCTGAGGTCACCGGCGCCCTTG
AAAATCTTATGAACTTCGTGGAAGAAAAGATGGATGACTCGTCTTCCCTC
TTGCAGATCATCGTCACGAGGTCACCGGCGCCCTTGAAAATCTTATGAAC
TTCGTGGAAGAAAAGATGGATGACTCGTCTTCCCTCTTGCAGATCATCGT
CACGAGCGCTGCCGAGAAAAATGGGGAGTTCATTGTTCCCTTGTCTCAGG
AACGCCTCGGGTCCCTCCGACAGAGCGTCAAGATCCATCGAGACCAACTC
GACAACAACTTCCTCCGCTGCCGAGAAAAATGGGGAGTTCATTGTTCCCT
TGTCTCAGGAACGCCTCGGGTCCCTCCGACAGAGCGTCAAGATCCATCGA
GACCAACTCGACAACAACTTCCTCGCCACCGTTCAAGCGTGGTTGGAGAG
GTGTAAAAAGGAGGAGGAGATGGAGGGCATGGTCGTCATCCTGCAGAAGG
CCACCGTTCAAGCGTGGTTGGAGAGGTGTAAAAAGGAGGAGGAGATGGAG
GGCATGGTCGTCATCCTGCAGAAGATTCTTCAACTGTACGCATCGGAGGC
GATCCTGGAGAGAAAACCCGGGCCGAAGCGAAGAGACCCGGAGGTGGGAG
GTGATCTTCCCGATGTGACGAGGCAAACGCCCGCCGGTCTGCTCCTCGAC
AGGATACTGGAGACGGACGCCGAACAGTGGAGCGGGATACTGAGCAGTCT
GGCGGCTCCTGGGAAGGGTATGGCAGGCGGCGTGACCAAGGAAGGTCTCT
TGGGGGCCGTGCAGATTCTTCAACTGTACGCATCGGAGGCGATCCTGGAG
AGAAAACCCGGGCCGAAGCGAAGAGACCCGGAGGTGGGAGGTGATCTTCC
CGATGTGACGAGGCAAACGCCCGCCGGTCTGCTCCTCGACAGGATACTGG
AGACGGACGCCGAACAGTGGAGCGGGATACTGAGCAGTCTGGCGGCTCCT
GGGAAGGGTATGGCAGGCGGCGTGACCAAGGAAGGTCTCTTGGGGGCCGT
GCAGGTGGCTGTAGAGACGGTGGTCCTACAGCAGGAGAATGGCAGCATGG
CCCAGCGGGTGCAGGCCGAGTTTCTCTCGGAGCTGTGCAAGCGAATAGAG
GCCGCCGCGCCGCAAGAGGAGCGTCCACCGCCGGGCATCCTCGAGTGAGT
GGCTGTAGAGACGGTGGTCCTACAGCAGGAGAATGGCAGCATGGCCCAGC
GGGTGCAGGCCGAGTTTCTCTCGGAGCTGTGCAAGCGAATAGAGGCCGCC
GCGCCGCAAGAGGAGCGTCCACCGCCGGGCATCCTCGAGTGA
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