mRNA_F-serratus_M_contig121.1640.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: D7FXA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXA2_ECTSI) HSP 1 Score: 169 bits (428), Expect = 7.490e-48 Identity = 77/90 (85.56%), Postives = 88/90 (97.78%), Query Frame = 1
Query: 73 SSTMAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEEDD 342
++TMAA+RF+MNRSWDHIQ+KYVGTGHSDT+KFEWATNQHRDSIASH+GHSDLL YFAVAEN+A+GRVRYQLLEKMLQPCGPPP K++DD
Sbjct: 32 AATMAADRFNMNRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDD 121
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A1W0A9Q9_9STRA (Splicing factor subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q9_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.950e-41 Identity = 66/86 (76.74%), Postives = 80/86 (93.02%), Query Frame = 1
Query: 82 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 339
MAA+RF++NR W+H+Q+KYVGTGH+DTSKFEWA NQHRD++ASH+GH D+LAYFAVAEN +IGRVRY +LEKM+QPCGPPP KEED
Sbjct: 1 MAADRFNINRQWEHLQAKYVGTGHADTSKFEWAVNQHRDTLASHIGHKDMLAYFAVAENESIGRVRYAMLEKMVQPCGPPPIKEED 86
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A6G0XHV2_9STRA (Splicing factor subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHV2_9STRA) HSP 1 Score: 149 bits (377), Expect = 8.140e-41 Identity = 65/85 (76.47%), Postives = 80/85 (94.12%), Query Frame = 1
Query: 82 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEE 336
MAA+RF++NR W+H+QSKYVGTGH+DTSKFEWA NQHRD++ASH+GHSD+LAYFAVAEN +IGRVR+ +LEKMLQPCGPPP K++
Sbjct: 1 MAADRFNINRQWEHLQSKYVGTGHADTSKFEWAVNQHRDTLASHIGHSDMLAYFAVAENESIGRVRFNMLEKMLQPCGPPPKKQD 85
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A662XDD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDD1_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.980e-40 Identity = 66/85 (77.65%), Postives = 80/85 (94.12%), Query Frame = 1
Query: 85 AANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 339
AA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GHSD+LA+FAVAEN AIGRVRY +LEKMLQPCGPPP KEED
Sbjct: 53 AADRFNVNRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAFFAVAENEAIGRVRYNMLEKMLQPCGPPPQKEED 137
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: H3G531_PHYRM (Splicing factor subunit n=20 Tax=Oomycota TaxID=4762 RepID=H3G531_PHYRM) HSP 1 Score: 148 bits (373), Expect = 3.240e-40 Identity = 64/85 (75.29%), Postives = 80/85 (94.12%), Query Frame = 1
Query: 85 AANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 339
AA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GHSD+LAYFAVAEN ++GRVRY +LEKMLQPCGPPP KEE+
Sbjct: 3 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 87
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A835ZDN9_9STRA (Splicing factor subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN9_9STRA) HSP 1 Score: 147 bits (370), Expect = 9.470e-40 Identity = 64/87 (73.56%), Postives = 81/87 (93.10%), Query Frame = 1
Query: 82 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEEDD 342
MAA+RF+ N+SWDHIQ+K+VGTGH DTSKFEWATNQHRD+IAS+VGHSD++ Y++VA+N + GRVRY L+EKMLQPCGPPPPK+++D
Sbjct: 1 MAADRFNFNKSWDHIQAKFVGTGHGDTSKFEWATNQHRDTIASNVGHSDIIDYYSVAQNLSQGRVRYNLMEKMLQPCGPPPPKDDED 87
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A8J5IQX8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQX8_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.170e-39 Identity = 64/85 (75.29%), Postives = 80/85 (94.12%), Query Frame = 1
Query: 85 AANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 339
AA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GHSD+LAYFAVAEN ++GRVRY +LEKMLQPCGPPP KEE+
Sbjct: 45 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 129
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: F0W9E9_9STRA (Splicing factor subunit n=2 Tax=Albugo TaxID=65356 RepID=F0W9E9_9STRA) HSP 1 Score: 145 bits (365), Expect = 4.680e-39 Identity = 62/86 (72.09%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 82 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 339
MAA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GH+D+L YFAVAEN +I RVRY +LE+MLQPCGPPP KEE+
Sbjct: 1 MAADRFNVNRQWEHLQAKYVGTGHADTTKFEWALNQHRDTLASHIGHADMLLYFAVAENESIARVRYNMLERMLQPCGPPPQKEEE 86
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A024TML8_9STRA (Splicing factor subunit n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TML8_9STRA) HSP 1 Score: 144 bits (364), Expect = 6.560e-39 Identity = 59/86 (68.60%), Postives = 81/86 (94.19%), Query Frame = 1
Query: 82 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 339
MAA+R+++NR W+H+Q+KYVGTGH+DTSKFEWA NQHRD++ASH+GH+D+L+YFAVAEN ++GR+R+ +LEKM+QPCGPPP K+E+
Sbjct: 1 MAADRYNINRQWEHLQAKYVGTGHADTSKFEWAVNQHRDTLASHIGHNDMLSYFAVAENESVGRLRFNMLEKMIQPCGPPPKKQEE 86
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: K3WSC6_GLOUD (Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WSC6_GLOUD) HSP 1 Score: 143 bits (360), Expect = 2.520e-38 Identity = 60/86 (69.77%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 82 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 339
MAA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GH D+L+YFA AEN A+GRV++ +LEKMLQPCGPPP KE++
Sbjct: 1 MAADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHYDMLSYFAAAENEAVGRVKFNMLEKMLQPCGPPPQKEDE 86 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig121.1640.1 >prot_F-serratus_M_contig121.1640.1 ID=prot_F-serratus_M_contig121.1640.1|Name=mRNA_F-serratus_M_contig121.1640.1|organism=Fucus serratus male|type=polypeptide|length=89bp MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLback to top mRNA from alignment at F-serratus_M_contig121:64504..67625+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig121.1640.1 ID=mRNA_F-serratus_M_contig121.1640.1|Name=mRNA_F-serratus_M_contig121.1640.1|organism=Fucus serratus male|type=mRNA|length=3122bp|location=Sequence derived from alignment at F-serratus_M_contig121:64504..67625+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig121:64504..67625+ >mRNA_F-serratus_M_contig121.1640.1 ID=mRNA_F-serratus_M_contig121.1640.1|Name=mRNA_F-serratus_M_contig121.1640.1|organism=Fucus serratus male|type=CDS|length=534bp|location=Sequence derived from alignment at F-serratus_M_contig121:64504..67625+ (Fucus serratus male)back to top |