prot_F-serratus_M_contig121.1640.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig121.1640.1
Unique Nameprot_F-serratus_M_contig121.1640.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length89
Homology
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: D7FXA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXA2_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 1.940e-52
Identity = 76/87 (87.36%), Postives = 85/87 (97.70%), Query Frame = 0
Query:    1 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEEDD 87
            MAA+RF+MNRSWDHIQ+KYVGTGHSDT+KFEWATNQHRDSIASH+GHSDLL YFAVAEN+A+GRVRYQLLEKMLQPCGPPP K++DD
Sbjct:   35 MAADRFNMNRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDD 121          
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A1W0A9Q9_9STRA (Splicing factor subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q9_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.140e-46
Identity = 66/86 (76.74%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 86
            MAA+RF++NR W+H+Q+KYVGTGH+DTSKFEWA NQHRD++ASH+GH D+LAYFAVAEN +IGRVRY +LEKM+QPCGPPP KEED
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTSKFEWAVNQHRDTLASHIGHKDMLAYFAVAENESIGRVRYAMLEKMVQPCGPPPIKEED 86          
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A6G0XHV2_9STRA (Splicing factor subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHV2_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.280e-46
Identity = 65/85 (76.47%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    1 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEE 85
            MAA+RF++NR W+H+QSKYVGTGH+DTSKFEWA NQHRD++ASH+GHSD+LAYFAVAEN +IGRVR+ +LEKMLQPCGPPP K++
Sbjct:    1 MAADRFNINRQWEHLQSKYVGTGHADTSKFEWAVNQHRDTLASHIGHSDMLAYFAVAENESIGRVRFNMLEKMLQPCGPPPKKQD 85          
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A662XDD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDD1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 7.800e-46
Identity = 66/85 (77.65%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    2 AANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 86
            AA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GHSD+LA+FAVAEN AIGRVRY +LEKMLQPCGPPP KEED
Sbjct:   53 AADRFNVNRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAFFAVAENEAIGRVRYNMLEKMLQPCGPPPQKEED 137          
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: H3G531_PHYRM (Splicing factor subunit n=20 Tax=Oomycota TaxID=4762 RepID=H3G531_PHYRM)

HSP 1 Score: 150 bits (378), Expect = 1.380e-45
Identity = 64/85 (75.29%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    2 AANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 86
            AA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GHSD+LAYFAVAEN ++GRVRY +LEKMLQPCGPPP KEE+
Sbjct:    3 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 87          
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A835ZDN9_9STRA (Splicing factor subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN9_9STRA)

HSP 1 Score: 149 bits (375), Expect = 4.190e-45
Identity = 64/87 (73.56%), Postives = 81/87 (93.10%), Query Frame = 0
Query:    1 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEEDD 87
            MAA+RF+ N+SWDHIQ+K+VGTGH DTSKFEWATNQHRD+IAS+VGHSD++ Y++VA+N + GRVRY L+EKMLQPCGPPPPK+++D
Sbjct:    1 MAADRFNFNKSWDHIQAKFVGTGHGDTSKFEWATNQHRDTIASNVGHSDIIDYYSVAQNLSQGRVRYNLMEKMLQPCGPPPPKDDED 87          
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A8J5IQX8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQX8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.990e-45
Identity = 64/85 (75.29%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    2 AANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 86
            AA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GHSD+LAYFAVAEN ++GRVRY +LEKMLQPCGPPP KEE+
Sbjct:   45 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 129          
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: F0W9E9_9STRA (Splicing factor subunit n=2 Tax=Albugo TaxID=65356 RepID=F0W9E9_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.220e-44
Identity = 62/86 (72.09%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 86
            MAA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GH+D+L YFAVAEN +I RVRY +LE+MLQPCGPPP KEE+
Sbjct:    1 MAADRFNVNRQWEHLQAKYVGTGHADTTKFEWALNQHRDTLASHIGHADMLLYFAVAENESIARVRYNMLERMLQPCGPPPQKEEE 86          
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: A0A024TML8_9STRA (Splicing factor subunit n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TML8_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.150e-44
Identity = 59/86 (68.60%), Postives = 81/86 (94.19%), Query Frame = 0
Query:    1 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 86
            MAA+R+++NR W+H+Q+KYVGTGH+DTSKFEWA NQHRD++ASH+GH+D+L+YFAVAEN ++GR+R+ +LEKM+QPCGPPP K+E+
Sbjct:    1 MAADRYNINRQWEHLQAKYVGTGHADTSKFEWAVNQHRDTLASHIGHNDMLSYFAVAENESVGRLRFNMLEKMIQPCGPPPKKQEE 86          
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Match: K3WSC6_GLOUD (Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WSC6_GLOUD)

HSP 1 Score: 145 bits (365), Expect = 1.290e-43
Identity = 60/86 (69.77%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDLLAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEED 86
            MAA+RF++NR W+H+Q+KYVGTGH+DT+KFEWA NQHRD++ASH+GH D+L+YFA AEN A+GRV++ +LEKMLQPCGPPP KE++
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHYDMLSYFAAAENEAVGRVKFNMLEKMLQPCGPPPQKEDE 86          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXA2_ECTSI1.940e-5287.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1W0A9Q9_9STRA1.140e-4676.74Splicing factor subunit n=1 Tax=Thraustotheca clav... [more]
A0A6G0XHV2_9STRA3.280e-4676.47Splicing factor subunit n=1 Tax=Aphanomyces euteic... [more]
A0A662XDD1_9STRA7.800e-4677.65Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3G531_PHYRM1.380e-4575.29Splicing factor subunit n=20 Tax=Oomycota TaxID=47... [more]
A0A835ZDN9_9STRA4.190e-4573.56Splicing factor subunit n=1 Tax=Tribonema minus Ta... [more]
A0A8J5IQX8_9STRA4.990e-4575.29Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
F0W9E9_9STRA2.220e-4472.09Splicing factor subunit n=2 Tax=Albugo TaxID=65356... [more]
A0A024TML8_9STRA3.150e-4468.60Splicing factor subunit n=5 Tax=Saprolegniaceae Ta... [more]
K3WSC6_GLOUD1.290e-4369.77Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017089Splicing factor 3B, subunit 5PIRSFPIRSF037010SF3B5coord: 1..87
e-value: 6.7E-37
score: 123.4
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PFAMPF07189SF3b10coord: 5..81
e-value: 2.2E-36
score: 123.8
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PANTHERPTHR20978FAMILY NOT NAMEDcoord: 3..86
NoneNo IPR availablePANTHERPTHR20978:SF0SPLICING FACTOR 3B SUBUNIT 5coord: 3..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig121contigF-serratus_M_contig121:64585..66645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig121.1640.1mRNA_F-serratus_M_contig121.1640.1Fucus serratus malemRNAF-serratus_M_contig121 64504..67625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig121.1640.1 ID=prot_F-serratus_M_contig121.1640.1|Name=mRNA_F-serratus_M_contig121.1640.1|organism=Fucus serratus male|type=polypeptide|length=89bp
MAANRFDMNRSWDHIQSKYVGTGHSDTSKFEWATNQHRDSIASHVGHSDL
LAYFAVAENSAIGRVRYQLLEKMLQPCGPPPPKEEDDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017089Splicing_factor_3B_subunit_5
IPR009846SF3b5/RDS3-10