mRNA_F-serratus_M_contig1043.443.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1043.443.1 vs. uniprot
Match: A0A6H5KN83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN83_9PHAE) HSP 1 Score: 160 bits (406), Expect = 2.150e-44 Identity = 131/335 (39.10%), Postives = 159/335 (47.46%), Query Frame = 1 Query: 1 MSGLDYSKWDKMASEMSDSDEDDGDIGSSPQVTAFDKPQSVTFGGAAPPAKQALRLNDDSSIKRSGSDDISKSNS--------SEGATTAG--------------------------------GR--LSYVWRQTSSEVIVVVPAPPETRAADVLVSLTHKQETIAEGVVDFLKVAVTTGRRRD--ISNATNTRGSARGASPCRV---------QKGHGREEEDE-----------------------------------------------RKEVLVLLE-------VTLWWKSLMKGGPEIDVSAIQGRPVNKHRTAWEEALGMFKEKVAKRK 684 MSG+DYSKWDKMASEMSDSD+D+G+ +P+VT FD+PQSVTFGG + A QA D +S D + S+S S GA A GR L YVWRQT +EV+VVVP P TRA DV VSL K ETIAEGV D ++VAV R RD S T +A G V Q G E+E E R+ V ++L+ +WWKSL+KGGPEIDV+AI+GR N H++ WEEALGMFKE+VA RK Sbjct: 1 MSGVDYSKWDKMASEMSDSDDDNGN---NPEVTTFDQPQSVTFGGTS--ASQAAEGWDGASDDSGAHPDTTPSSSGVAAPADGSTGAVAAAATGTTPTPQVKPLISDERLTENGAAVRGDANAGRQALQYVWRQTRAEVVVVVPVPAGTRAGDVEVSLRAKPETIAEGVADLIRVAVKATRGRDGAASRELGTAATAPGGGTKLVPVLEGELAFQAKLGAEDEGEVEWELKDYPGTAVARDDPDSSGDPVGSAPPPAPAAGAREASSSSNGDRRGVEIVLKKHCPVPNAAVWWKSLLKGGPEIDVAAIKGRATNNHQSVWEEALGMFKEQVAARK 330
BLAST of mRNA_F-serratus_M_contig1043.443.1 vs. uniprot
Match: A0A836CJH1_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH1_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 4.590e-18 Identity = 83/280 (29.64%), Postives = 125/280 (44.64%), Query Frame = 1 Query: 10 LDYSKWDKMASEMSDSDEDDGDIGSSPQVTAFDKPQSVTFGGAAPPAKQALRLNDD-----------SSIKRSGSDDISKSNSSE-----------GATTAG--GRLSYVWRQTSSEVIVVVPAPPETRAADVLVSLT---------------HKQETIAEGVVDF-----LKVAVTTGRRRDISNATNTRG-SARGASPCRVQKGHGREEEDERKEVLVLLEVTL-----------WWKSLMKGGPEIDVSAIQGRPV---NKHRTAWEEALGMFKEKV 672 +DYSKWDKMA++MSDS++++G GS P VTAFD P SVT+GG P ++ L SS G+DD ++ ++ GA G +Y W Q+ +V + V APP TRA++V V +T H + A+G + VA+ + G AR A V+ ++ + + VTL WWK +KGGP ID++AI+GR + + W+EA+ F+ +V Sbjct: 2 VDYSKWDKMAADMSDSEDEEG--GSKPVVTAFDNPTSVTWGGGDAPEEERLXXXXXXXXXXXXXXXXSSAGTPGADDSKRAALTDKPARLLTLTRNGAAVQDDCGAYTYFWSQSRGDVAITVVAPPGTRASEVEVKVTSDASAPTLAAQAPLGHHLKVSAKGAILLEGDLTYPVALDPDDPESVDWVLQDLGLPARPAPESAVESDVSTADQSSERSPARAITVTLRKHSPIAGAALWWKGAVKGGPTIDMAAIEGRDAKGASASQKVWDEAMEGFRARV 279
BLAST of mRNA_F-serratus_M_contig1043.443.1 vs. uniprot
Match: A0A1J4MGJ4_9CRYT (Nuclear move domain-containing protein n=1 Tax=Cryptosporidium ubiquitum TaxID=857276 RepID=A0A1J4MGJ4_9CRYT) HSP 1 Score: 85.1 bits (209), Expect = 1.990e-16 Identity = 77/241 (31.95%), Postives = 116/241 (48.13%), Query Frame = 1 Query: 1 MSGLDYSKWDKMASEMSDSDEDDGDIGSSPQVTAFDKPQSVTFGGAAPPAKQALR----LNDD---SSIKRSGSDDISKSNSSEGATTAGGRLSYVWRQTSSEVIVVVPAPPETRAADVLVSLTHKQETIAEGVVDFLKVAVTTGRRRDISNATNTRGSARGASPCRVQKGHGREEEDERKEVLVLLEVTLWWKSLMKGGPEIDVSAIQ--GRPVNKHRT-----AWEEALGMFKEKVAKR 681 MSG+DYSKWDK+ E+S SDE+ G +GS VT FD PQS+T GG + +L L DD S+ S IS + G +A G+ Y W QT + + +++ P T+ D+ V++T + T+ G L G + D + + + + ++ E E+KE+ + LWWK + KGG E D+S P ++ R AWEEA F+ K+ R Sbjct: 1 MSGIDYSKWDKI--EIS-SDEESGKLGSKCNVTRFDSPQSITIGGQRESKEDSLVSSNILVDDLKTKSVLVSREKVISLDDYVFGGKSACGK-DYYWTQTENGLTIILEIDPGTQNKDLKVNVTEDKVTVTHGSETILFEEFEYGVKDDDNTIFWSVKEVESLNGAQNKRSRMLVLELEKKELDT--SIRLWWKKIFKGGIEADISKFSRFSSPKSEERNRKFLEAWEEAHNEFRNKIKNR 235
BLAST of mRNA_F-serratus_M_contig1043.443.1 vs. uniprot
Match: A0A2P4YYV1_9CRYT (CS domain protein n=4 Tax=Cryptosporidium TaxID=5806 RepID=A0A2P4YYV1_9CRYT) HSP 1 Score: 63.9 bits (154), Expect = 1.160e-8 Identity = 62/243 (25.51%), Postives = 110/243 (45.27%), Query Frame = 1 Query: 1 MSGLDYSKWDKMASEMSDSDEDDGDIGSSPQVTAFDKPQSVTFGGAAPPAKQALRLNDDSSIKR---------SGSDDISKSNSSEGATTAGGRLSYVWRQTSSEVIVVVPAPPETRAADVLVSLTHKQETIAEGVVDFLKVAVTTGRRRDISNATNTRGSARGASPCRVQKGHGREEEDERKEVLVLLEVTLWWKSLMKGGPEIDVSAI-------QGRPVNKHRTAWEEALGMFKEKVAKR 681 MSG+DYSKWDK+ E+S +E + + S VT FD P S+TFGG +++ ++N D ++ S +S ++ G + G+ +Y W QT +++ +V+ PE ++ D V++T TI G+ L + D + + + ++ + E ++ + + +WWK + KGG E D+S + K WE+A F+ K+ R Sbjct: 1 MSGIDYSKWDKI--EISSDEESEKSV-SRCNVTRFDSPHSITFGGHIE-SEEDNKVNSDVKVEEFKKIEPGHVSREKILSLNDYVFGGKSKNGK-NYYWTQTENDLTIVIEISPEMQSKDFKVNVTESDITIMYGLETILLEKFEYEVKYDDNTIFWSIKDVESFDKVQNKRIINKMLVLELEKKELNNSIRIWWKRIFKGGIETDISKFNRFTSSNKEERNKKFLQVWEKAHDEFRNKIKNR 238
BLAST of mRNA_F-serratus_M_contig1043.443.1 vs. uniprot
Match: A0A7S0KK22_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KK22_9CHLO) HSP 1 Score: 55.8 bits (133), Expect = 1.230e-5 Identity = 47/171 (27.49%), Postives = 72/171 (42.11%), Query Frame = 1 Query: 250 GRLSYVWRQTSSEVIVVVPAPPETRAADVLVSLTHKQETIAEGVVDFLKVAVTTGRRRDISN-------ATNTRGSARGASPCRVQ-----------KGHGREEEDERKEVLVLLE------VTLWWKSLMKGGPEIDVSAIQGRPVNKH---RTAWEEALGMFKEKVAKR 681 G + Y WRQ + E V P+T+A DV V ++ ++ I+ V G R++ A R CR +GHG +D R+ V V + + WW+S +KGGPE+D + R K +T W +A MF+E++A R Sbjct: 145 GAVRYFWRQDAKEATASVVVAPKTKAKDVRVDVSAREVKIS--------VMKDGGEIREVFRGEWAHEIAEEPRDEDEDDIGCRAAPTFGDWEITDFEGHG---DDARRVVRVTVRKKSSDMLVHWWRSCVKGGPEVDPMTFEDRSATKASQAQTTWAQAQAMFRERIANR 304 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1043.443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1043.443.1 >prot_F-serratus_M_contig1043.443.1 ID=prot_F-serratus_M_contig1043.443.1|Name=mRNA_F-serratus_M_contig1043.443.1|organism=Fucus serratus male|type=polypeptide|length=228bp MSGLDYSKWDKMASEMSDSDEDDGDIGSSPQVTAFDKPQSVTFGGAAPPAback to top mRNA from alignment at F-serratus_M_contig1043:53792..54838- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1043.443.1 ID=mRNA_F-serratus_M_contig1043.443.1|Name=mRNA_F-serratus_M_contig1043.443.1|organism=Fucus serratus male|type=mRNA|length=1047bp|location=Sequence derived from alignment at F-serratus_M_contig1043:53792..54838- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1043:53792..54838- >mRNA_F-serratus_M_contig1043.443.1 ID=mRNA_F-serratus_M_contig1043.443.1|Name=mRNA_F-serratus_M_contig1043.443.1|organism=Fucus serratus male|type=CDS|length=1368bp|location=Sequence derived from alignment at F-serratus_M_contig1043:53792..54838- (Fucus serratus male)back to top |