mRNA_F-serratus_M_contig1014.236.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1014.236.1 vs. uniprot
Match: A0A6H5K1Y5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Y5_9PHAE) HSP 1 Score: 298 bits (762), Expect = 3.010e-88 Identity = 202/477 (42.35%), Postives = 286/477 (59.96%), Query Frame = 1 Query: 202 FLKRAAKGMRNLGEAIDPDAVARAERAWEENSPNWRQPEEXXXXXXXXXXXXXXXXXGVLSDIENNAMSRNR-EAERPGFDSSDRRARERKR----------VKRDAATMLKDASNEVVGNIAREAVDTFRTKLDEVLSEGNVRTAFMLWRDLLKIPGVQLFVRDEKLWKGAKRSLRKYLNGLMTEETRMDVQRAVNATAGFALHYAGLSRNVEKTEFEVFLEISESMCHLQGAAEKLRPLIKKTLPMVGYKDYVYEADSAIKTRLPARVTLMISASSLLGMNPGRDPFLMTLIAAFALGHITEDFAKNLADLFVKTFSDSSTFE----RQSMPNERGRGSVDPGGLAAELVSGTSSCQELGLDAFEFFKGVKRAL--TLPPSSKEGNPNAFNGRSLSADTSASSEDRLYPA------------RKLDKDGRLFRLVLLVVAVVDHPVFSLDIFLMGLGIFILIGGMGLGACCREGM 1545 L RA + + +GE ++PDAVA AE+AW+E +P+ RQ + XXXXXXXXXXXXXX + E +R DSS A+ER+ +K+D + +V G A E + +F T+L E LSEGNVR A LWR LL PGVQL +D +LW GA++++R+YL+G ++E++ + QRAVNATA FALH+AGLSRN K++ EVF E+S +CHLQGAAEKL PL LP++GY+DY + +SAI++ +RVT +SA+ LLG+NP RDPFL+TLIA+F+LGH+++D A+N+A F K D F+ +QS+ + G + P LA ELV+GT +CQELG AF FFK V+RAL + P E NG S + S + ++ P RKL +G + R + V AV+D FSL++ ++ L + ++ + CC G+ Sbjct: 17 LLGRAFQQAKRIGEIVNPDAVANAEQAWKELAPDLRQAADDXXXXXXXXXXXXXXARDIWXXXXXXXSGFGAVETDRTAADSSATFAQEREEGGSVTVGWEGLKKDIERAAQGVFGDVFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPGVQLLAQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRNAAKSDHEVFEELSHKLCHLQGAAEKLWPLAVLALPLLGYQDYAKKLESAIRSNALSRVTQTVSATVLLGLNP-RDPFLLTLIASFSLGHLSKDVAQNMAAFFQKVLVDQVRFDQPQTKQSLSDAEGAPLLSPVDLATELVTGTKTCQELGHQAFAFFKVVQRALEGSSPSFVVESVDVNDNGVHPSTEASTALQEGRPPPQPLQQRGPRRTPRKLKLEGIVLRQAIWVAAVIDSKYFSLEVLVVCLVVGCVLVFGSIWVCCWRGL 492 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1014.236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1014.236.1 >prot_F-serratus_M_contig1014.236.1 ID=prot_F-serratus_M_contig1014.236.1|Name=mRNA_F-serratus_M_contig1014.236.1|organism=Fucus serratus male|type=polypeptide|length=512bp MHIRVVFFGGLLSHVVAQRGLDELDRQMARKAREEMKYDKREGLDFLKRAback to top mRNA from alignment at F-serratus_M_contig1014:143638..156260+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1014.236.1 ID=mRNA_F-serratus_M_contig1014.236.1|Name=mRNA_F-serratus_M_contig1014.236.1|organism=Fucus serratus male|type=mRNA|length=12623bp|location=Sequence derived from alignment at F-serratus_M_contig1014:143638..156260+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1014:143638..156260+ >mRNA_F-serratus_M_contig1014.236.1 ID=mRNA_F-serratus_M_contig1014.236.1|Name=mRNA_F-serratus_M_contig1014.236.1|organism=Fucus serratus male|type=CDS|length=3072bp|location=Sequence derived from alignment at F-serratus_M_contig1014:143638..156260+ (Fucus serratus male)back to top |