prot_F-serratus_M_contig1014.236.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1014.236.1
Unique Nameprot_F-serratus_M_contig1014.236.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length512
Homology
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BLAST of mRNA_F-serratus_M_contig1014.236.1 vs. uniprot
Match: A0A6H5K1Y5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Y5_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 2.170e-91
Identity = 202/477 (42.35%), Postives = 286/477 (59.96%), Query Frame = 0 
Query:   46 FLKRAAKGMRNLGEAIDPDAVARAERAWEENSPNWRQPEEXXXXXXXXXXXXXXXXXGVLSDIENNAMSRNR-EAERPGFDSSDRRARERKR----------VKRDAATMLKDASNEVVGNIAREAVDTFRTKLDEVLSEGNVRTAFMLWRDLLKIPGVQLFVRDEKLWKGAKRSLRKYLNGLMTEETRMDVQRAVNATAGFALHYAGLSRNVEKTEFEVFLEISESMCHLQGAAEKLRPLIKKTLPMVGYKDYVYEADSAIKTRLPARVTLMISASSLLGMNPGRDPFLMTLIAAFALGHITEDFAKNLADLFVKTFSDSSTFE----RQSMPNERGRGSVDPGGLAAELVSGTSSCQELGLDAFEFFKGVKRAL--TLPPSSKEGNPNAFNGRSLSADTSASSEDRLYPA------------RKLDKDGRLFRLVLLVVAVVDHPVFSLDIFLMGLGIFILIGGMGLGACCREGM 493
             L RA +  + +GE ++PDAVA AE+AW+E +P+ RQ  + XXXXXXXXXXXXXX   +              E +R   DSS   A+ER+           +K+D     +    +V G  A E + +F T+L E LSEGNVR A  LWR LL  PGVQL  +D +LW GA++++R+YL+G ++E++  + QRAVNATA FALH+AGLSRN  K++ EVF E+S  +CHLQGAAEKL PL    LP++GY+DY  + +SAI++   +RVT  +SA+ LLG+NP RDPFL+TLIA+F+LGH+++D A+N+A  F K   D   F+    +QS+ +  G   + P  LA ELV+GT +CQELG  AF FFK V+RAL  + P    E      NG   S + S + ++   P             RKL  +G + R  + V AV+D   FSL++ ++ L +  ++    +  CC  G+
Sbjct:   17 LLGRAFQQAKRIGEIVNPDAVANAEQAWKELAPDLRQAADDXXXXXXXXXXXXXXARDIWXXXXXXXSGFGAVETDRTAADSSATFAQEREEGGSVTVGWEGLKKDIERAAQGVFGDVFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPGVQLLAQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRNAAKSDHEVFEELSHKLCHLQGAAEKLWPLAVLALPLLGYQDYAKKLESAIRSNALSRVTQTVSATVLLGLNP-RDPFLLTLIASFSLGHLSKDVAQNMAAFFQKVLVDQVRFDQPQTKQSLSDAEGAPLLSPVDLATELVTGTKTCQELGHQAFAFFKVVQRALEGSSPSFVVESVDVNDNGVHPSTEASTALQEGRPPPQPLQQRGPRRTPRKLKLEGIVLRQAIWVAAVIDSKYFSLEVLVVCLVVGCVLVFGSIWVCCWRGL 492
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1014.236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1Y5_9PHAE2.170e-9142.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..41
NoneNo IPR availableCOILSCoilCoilcoord: 80..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 490..511
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 469..489
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..468
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.575
NoneNo IPR availableTMHMMTMhelixcoord: 469..488

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1014contigF-serratus_M_contig1014:143704..155475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1014.236.1mRNA_F-serratus_M_contig1014.236.1Fucus serratus malemRNAF-serratus_M_contig1014 143638..156260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1014.236.1 ID=prot_F-serratus_M_contig1014.236.1|Name=mRNA_F-serratus_M_contig1014.236.1|organism=Fucus serratus male|type=polypeptide|length=512bp
MHIRVVFFGGLLSHVVAQRGLDELDRQMARKAREEMKYDKREGLDFLKRA
AKGMRNLGEAIDPDAVARAERAWEENSPNWRQPEEEMRRVREEMEALEAE
MQGVLSDIENNAMSRNREAERPGFDSSDRRARERKRVKRDAATMLKDASN
EVVGNIAREAVDTFRTKLDEVLSEGNVRTAFMLWRDLLKIPGVQLFVRDE
KLWKGAKRSLRKYLNGLMTEETRMDVQRAVNATAGFALHYAGLSRNVEKT
EFEVFLEISESMCHLQGAAEKLRPLIKKTLPMVGYKDYVYEADSAIKTRL
PARVTLMISASSLLGMNPGRDPFLMTLIAAFALGHITEDFAKNLADLFVK
TFSDSSTFERQSMPNERGRGSVDPGGLAAELVSGTSSCQELGLDAFEFFK
GVKRALTLPPSSKEGNPNAFNGRSLSADTSASSEDRLYPARKLDKDGRLF
RLVLLVVAVVDHPVFSLDIFLMGLGIFILIGGMGLGACCREGMGGVRRGW
LKGKGARKKRA*
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