mRNA_F-distichus_contig105560.480.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: D7FTG3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG3_ECTSI) HSP 1 Score: 137 bits (345), Expect = 7.490e-36 Identity = 62/82 (75.61%), Postives = 73/82 (89.02%), Query Frame = 1
Query: 1 RSVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 246
R++G+HPS+I+RLRHTATLRGH+ CVNRLCWND GT IASGSDDTTVCLFDAA+ KR +QF+TGH RNIL V+ LP TNDQ+
Sbjct: 84 RNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFQTGHRRNILSVKFLPCTNDQI 165
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A485LQN6_9STRA (Aste57867_24505 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQN6_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.140e-16 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 1 RSVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 246
R + H ++++RL + L H CVNRLCWN +GT +ASGSDDT V L+D T + ETGH+ NI GV +P TND +
Sbjct: 27 RQLQAHAALVKRLVCDSVLNKHDGCVNRLCWNQSGTTLASGSDDTRVILWDYNTRTARHVIETGHSMNIFGVCFVPGTNDHI 108
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: M2XUM7_GALSU (WD and tetratricopeptide repeats protein 1 isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUM7_GALSU) HSP 1 Score: 80.5 bits (197), Expect = 7.440e-16 Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 4 SVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 246
++ H S ++L + ATL+GH+ CVNRL +N+ G+ + SGSDD + ++D A + Q ETGH RNI GVR +P TND++
Sbjct: 31 NILSHSSFFQKLENIATLKGHSGCVNRLSFNEEGSLLLSGSDDCRLLVWDVAEGTLRDQVETGHDRNIFGVRFIPCTNDRL 111
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A1V9Z7T1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7T1_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.400e-15 Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 1 RSVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 246
R + H +++ RL A L+ H CVNRLCWN GT +ASGSDDT V L+D K + TGH+ NI GV +P TND +
Sbjct: 253 RLIQGHGALVRRLVCDAVLQTHDGCVNRLCWNQQGTILASGSDDTRVVLWDYQRRKPRHVITTGHSMNIFGVAFVPGTNDHI 334
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A2P6TIU3_CHLSO (WD and tetratricopeptide repeats 1-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TIU3_CHLSO) HSP 1 Score: 77.0 bits (188), Expect = 1.260e-14 Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 31 ERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRK-LQFETGHTRNILGVRILPSTND 240
+RL A LRGH+ CVNRLCWN++G+ +ASGSDD V L+ T+R+ L ET H NI GVR LP T D
Sbjct: 32 KRLSIEAVLRGHSGCVNRLCWNESGSLLASGSDDRKVMLWSYPDTQRQPLSIETEHQANIFGVRFLPQTGD 102
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A7S0E4J1_9CRYP (Hypothetical protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E4J1_9CRYP) HSP 1 Score: 76.3 bits (186), Expect = 2.300e-14 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 16 HPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTND 240
H ++I++L LRGH CVNRLCWNDTGT +AS SDD L+D ++ TGH RNI GV +P +ND
Sbjct: 29 HRALIDKLTLDQELRGHTGCVNRLCWNDTGTKLASVSDDCKCILWDV-NRHTHVEISTGHERNIFGVAFIPESND 102
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A024FVU5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVU5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 5.860e-14 Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 16 HPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 246
H + I+RL+ L GH CVN LCWN TGT +ASGSDD V +++ T KR +T H N+ V +P TND V
Sbjct: 60 HQAFIQRLQCDNVLEGHLGCVNHLCWNQTGTLLASGSDDANVIVWNYQTKKRLEVIQTKHRLNVFAVCFVPGTNDHV 136
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: L1JDY1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JDY1_GUITC) HSP 1 Score: 73.9 bits (180), Expect = 1.490e-13 Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 16 HPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTND 240
H S++++L LRGHA CVNRLCWN+TGT +AS SDD ++D L+ T H RNI GV +P ND
Sbjct: 13 HKSLVDKLTLHKELRGHAGCVNRLCWNETGTKLASVSDDCKCIIWDVNRNSH-LEISTEHERNIFGVAFIPERND 86
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A2P6V1B7_9CHLO (WD and tetratricopeptide repeats 1-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1B7_9CHLO) HSP 1 Score: 73.9 bits (180), Expect = 1.500e-13 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 22 SIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRK-LQFETGHTRNILGVRILPSTND 240
S +RL A LRGH CVNR+CWN++G+ +ASGSDD V L+ T+R+ + +T H NI GVR LP T D
Sbjct: 30 SAAQRLSLEAVLRGHNGCVNRMCWNESGSLLASGSDDRKVLLWSYPDTQRQPIALQTEHQANIFGVRFLPQTGD 103
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Match: A0A2D4CB75_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CB75_PYTIN) HSP 1 Score: 73.2 bits (178), Expect = 2.790e-13 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 4 SVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFDAATTKRKLQFETGHTRNILGVRILPSTNDQV 246
++ H +++ RL ATL H CVN L WN+ GT +ASGSDDT + L+D AT + + TGH NI V +P T D +
Sbjct: 54 TLQSHGALLRRLAVDATLESHRGCVNHLRWNEQGTLLASGSDDTRLILWDYATHRVRADIATGHVLNIFAVCFVPGTQDHI 134 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105560.480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig105560.480.1 >prot_F-distichus_contig105560.480.1 ID=prot_F-distichus_contig105560.480.1|Name=mRNA_F-distichus_contig105560.480.1|organism=Fucus distichus monoicous|type=polypeptide|length=82bp RSVGEHPSIIERLRHTATLRGHAQCVNRLCWNDTGTAIASGSDDTTVCLFback to top mRNA from alignment at F-distichus_contig105560:1001..1597- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig105560.480.1 ID=mRNA_F-distichus_contig105560.480.1|Name=mRNA_F-distichus_contig105560.480.1|organism=Fucus distichus monoicous|type=mRNA|length=597bp|location=Sequence derived from alignment at F-distichus_contig105560:1001..1597- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig105560:1001..1597- >mRNA_F-distichus_contig105560.480.1 ID=mRNA_F-distichus_contig105560.480.1|Name=mRNA_F-distichus_contig105560.480.1|organism=Fucus distichus monoicous|type=CDS|length=492bp|location=Sequence derived from alignment at F-distichus_contig105560:1001..1597- (Fucus distichus monoicous)back to top |