prot_F-distichus_contig10506.444.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10506.444.1
Unique Nameprot_F-distichus_contig10506.444.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length250
Homology
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A6H5JDM9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM9_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 4.030e-94
Identity = 163/265 (61.51%), Postives = 185/265 (69.81%), Query Frame = 0
Query:    3 GADEEAAKRERADGLESLREFPAMVLPKDAVVGSGQNSGPLPSQFYSMSPSYQSNCLYLLTLQTI--DSGDDED--------KGGDSP---RTTWVDKMRGELVGVNCGYFAAEIEVQFSASF-----NDAWSYPAMILLFCILHMCVLCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPPLE 249
            GADEE A  E A  L   REFPAMV+PK AV    Q SGPLPSQ+YS+   Y   CL+LLTLQT+  D G +ED        KGGD     R    D MRGE+VGVNC  F+A IEVQ S S      + A SY  +  + C+L MC+ CCR+G +LA+RRYGRNFMVP+RFQPPKFDY RPIPPEL EQ   ETAGGQ SEE RD+EAGN +EC ICYA+VD  L DYMLTPCDHVFHQGCL RWMD+K  CPTCR+ELPP LE
Sbjct:  512 GADEEEAG-EAAAAL--AREFPAMVVPKVAVAAESQESGPLPSQWYSLRKEYGQGCLFLLTLQTVEEDKGWNEDSFIGAVGEKGGDEASIARKPLADLMRGEMVGVNCD-FSAVIEVQLSPSTLRTAQSQAVSYSVLFTMVCVLQMCLFCCRVGLMLAQRRYGRNFMVPQRFQPPKFDYRRPIPPELVEQARTETAGGQPSEESRDLEAGNCLECTICYAAVDAELGDYMLTPCDHVFHQGCLTRWMDIKTTCPTCRQELPPALE 772          
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: D8LPM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM4_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 3.960e-60
Identity = 121/215 (56.28%), Postives = 147/215 (68.37%), Query Frame = 0
Query:    3 GADEEAAKRERADGLESL-REFPAMVLPKDAVVGSGQNSGPLPSQFYSMSPSYQSNCLYLLTLQTI--DSGDDED--------KGGD---SPRTTWVDKMRGELVGVNCGYFAAEIEVQFSASF-----NDAWSYPAMILLFCILHMCVLCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVE 198
            GADEE A     + + +L REFPAMV+PK AV   GQ SGPLPSQ+Y++   Y   CL+LLTLQT+  D G D+D        +GGD   + R    D MRGE+VGVNC  F+A IEVQ S S      + A +Y  +  + C+L MC+LCCR+G +LA+RRYGRNFMVP+RFQPPKFDYHRPIPPEL EQ   ETAGGQ SEE RD+EAGN +E
Sbjct:  513 GADEEEA----GEAVAALTREFPAMVVPKVAVATDGQESGPLPSQWYNLRKEYGQGCLFLLTLQTVEEDKGWDDDGIIGAVGEEGGDEAANARKPLADLMRGEMVGVNCD-FSAVIEVQLSPSTLRTAQSQAVNYSVVFTMVCLLQMCLLCCRVGLMLAQRRYGRNFMVPQRFQPPKFDYHRPIPPELVEQAQTETAGGQPSEESRDLEAGNCLE 722          
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A7S2HH52_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HH52_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.430e-27
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 0
Query:  136 RIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELP 245
            ++G +  ++R G  FM+P +F P K++Y RP+PP LA Q S++T           +E G+ +EC ICY+++D A  DYM+TPCDH+FH  CL RWM+ KMECP CR  LP
Sbjct:  218 QVGILYLQQRIGPRFMIPAQFLPAKYNYMRPLPPALA-QTSQDT-----------VENGSSLECVICYSTIDQATRDYMITPCDHIFHPTCLERWMEQKMECPVCRHVLP 315          
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A835Z9L2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L2_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.010e-25
Identity = 54/123 (43.90%), Postives = 77/123 (62.60%), Query Frame = 0
Query:  126 CILHMCVLCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIP--PELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPP 246
            C+L +  +  ++  IL + R+G +F +P RF P K++Y+RP+P  P+     + ETA         D+E G   ECAICY  VD +L  +M+TPCDH FH  CL +W+++KMECPTCR  LPP
Sbjct:  181 CVLLVLWVSVQVCVILMQDRFGPHFFIPARFLPQKYNYYRPVPSGPQYEAAETSETA---------DLETGTGPECAICYNVVDPSLRTHMVTPCDHCFHTECLQQWINIKMECPTCRSTLPP 294          
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A7S1E5W2_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E5W2_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.080e-23
Identity = 56/146 (38.36%), Postives = 72/146 (49.32%), Query Frame = 0
Query:  140 ILARRRYGRNFMVPRRFQPPKFDYHRPIPPEL-----------AEQVSRETAGGQDSEEGRDIEAGN----------------------------LVECAICYASVDGALE-DYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELP 245
            ++A+ +YG  FM+P RF PPKFDYHR IPP L           +EQV   TA    +E       G                              ++C IC   +D   +  YML PC+H+FH+ CL++WMDVKMECPTCR ELP
Sbjct:   15 LIAQSKYGARFMIPARFLPPKFDYHRAIPPSLLPPEAEEQDMKSEQVKPSTAPTLQNESPEHTTTGTRNRLKKKNGSQEHVTTTMTTEAVEVPTPALDCVICCNGIDHHNQKSYMLAPCEHIFHKDCLIQWMDVKMECPTCRTELP 160          
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A5J4XT81_9CHLO (Putative RING finger-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XT81_9CHLO)

HSP 1 Score: 107 bits (267), Expect = 6.450e-23
Identity = 60/127 (47.24%), Postives = 76/127 (59.84%), Query Frame = 0
Query:  125 FCILHMCVLCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPP-ELAEQVSRETAGGQDSEEG-RDIEAGNL-VECAICYASVD-GALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPP 247
            FC++ +  L  +   +L +  +G  + VP+RF P K+DYHRP+ P E+AE       G  DS  G  D+E G+  VEC IC    D G     M+TPC+H FH  CL RWMDVKMECPTCRR LP P
Sbjct:  482 FCMVLVAWLSLQAAVLLCQTVWGPRWFVPKRFLPAKYDYHRPVVPREVAE-------GALDSSSGPADVETGDAGVECVICMNPADVGQPRTRMVTPCNHFFHNHCLQRWMDVKMECPTCRRSLPTP 601          
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: D3AZF4_POLPP (RING-type domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZF4_POLPP)

HSP 1 Score: 101 bits (252), Expect = 5.650e-21
Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = 0
Query:  133 LCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPP 246
            +C +I  +  + RYG  F +P+RF PPK+ Y RPI   +           ++ EEG+         C IC   V+    DYM+TPC+H+FH  CL+RWMD KMECPTCRR +PP
Sbjct:  442 MCTQIFALYLQDRYGPTFFIPKRFLPPKYQYTRPISMSI-----------RNREEGQG--------CVICMNDVEANDSDYMITPCEHLFHSRCLLRWMDYKMECPTCRRTIPP 536          
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A662YGN9_9STRA (RING-type domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGN9_9STRA)

HSP 1 Score: 101 bits (251), Expect = 9.940e-21
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 0
Query:  136 RIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPP 247
            ++G +  ++RYG  F VP RF P K++Y R I     +Q++   +GG  S      +  N V+C IC   +D    DYM+ PCDH+FH+ CL  WM VKMECPTCR  LP P
Sbjct:  651 QVGVLALQQRYGPRFFVPARFLPVKYNYERRI---NLQQMALLHSGGSAS-----CDEDNSVDCVICMVEIDVDARDYMIAPCDHIFHRECLQGWMQVKMECPTCRCVLPEP 754          
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A8J9WR16_9CHLO (Transmembrane E3 ubiquitin-protein ligase FLY1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR16_9CHLO)

HSP 1 Score: 100 bits (250), Expect = 1.210e-20
Identity = 51/114 (44.74%), Postives = 69/114 (60.53%), Query Frame = 0
Query:  136 RIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNL-VECAICYASVD-GALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPP 247
            ++  +L + R+G    +P+RF P K+DYHR  P       +R     ++++  RDIE G+  VEC IC   +D       M+TPC+H FH  CL RWMDVKMECPTCR+ LPPP
Sbjct:  496 QVAVLLVQTRWGPRCFIPKRFLPAKYDYHRRAP-------ARPPQAPEEAQGPRDIETGDAGVECVICMNPLDVERTSARMVTPCNHFFHPDCLNRWMDVKMECPTCRQLLPPP 602          
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A1Y1HW36_KLENI (RING-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HW36_KLENI)

HSP 1 Score: 100 bits (249), Expect = 1.740e-20
Identity = 55/123 (44.72%), Postives = 73/123 (59.35%), Query Frame = 0
Query:  126 CILHMCVLCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGA--LEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPP 246
            C+   C LC + G +L +  +G    +P+RF+P K+ Y R I     E+ S    GG+        EAG+L +C IC A VD A      M+TPCDH+FH  CL +WMD+KMECPTCRR+LPP
Sbjct:  554 CVGLACFLCGQAGVLLLQHYFGAWCFIPKRFRPEKYSYFRRI-----ERAS--IPGGE--------EAGHL-DCVICMAPVDAAPLSRQRMVTPCDHLFHSSCLEKWMDIKMECPTCRRQLPP 660          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDM9_9PHAE4.030e-9461.51RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LPM4_ECTSI3.960e-6056.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2HH52_9STRA1.430e-2747.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z9L2_9STRA1.010e-2543.90RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1E5W2_9STRA3.080e-2338.36Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A5J4XT81_9CHLO6.450e-2347.24Putative RING finger-like n=1 Tax=Trebouxia sp. A1... [more]
D3AZF4_POLPP5.650e-2142.98RING-type domain-containing protein n=1 Tax=Polysp... [more]
A0A662YGN9_9STRA9.940e-2143.75RING-type domain-containing protein (Fragment) n=2... [more]
A0A8J9WR16_9CHLO1.210e-2044.74Transmembrane E3 ubiquitin-protein ligase FLY1 n=1... [more]
A0A1Y1HW36_KLENI1.740e-2044.72RING-type domain-containing protein n=1 Tax=Klebso... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 198..241
e-value: 5.3E-4
score: 18.2
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 199..240
e-value: 5.3E-7
score: 39.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 198..241
e-value: 2.5E-11
score: 43.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 199..241
score: 12.725
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 173..246
e-value: 1.3E-15
score: 58.5
NoneNo IPR availablePANTHERPTHR22763:SF165TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE FLY1coord: 122..247
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 122..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..141
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 198..247
NoneNo IPR availableTMHMMTMhelixcoord: 118..140

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 198..241
e-value: 5.3E-4
score: 18.2
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 199..240
e-value: 5.3E-7
score: 39.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 198..241
e-value: 2.5E-11
score: 43.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 199..241
score: 12.725
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 173..246
e-value: 1.3E-15
score: 58.5
NoneNo IPR availablePANTHERPTHR22763:SF165TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE FLY1coord: 122..247
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 122..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..141
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 198..247
NoneNo IPR availableTMHMMTMhelixcoord: 118..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10506contigF-distichus_contig10506:6081..9563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10506.444.1mRNA_F-distichus_contig10506.444.1Fucus distichus monoicousmRNAF-distichus_contig10506 4580..10555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10506.444.1 ID=prot_F-distichus_contig10506.444.1|Name=mRNA_F-distichus_contig10506.444.1|organism=Fucus distichus monoicous|type=polypeptide|length=250bp
MVGADEEAAKRERADGLESLREFPAMVLPKDAVVGSGQNSGPLPSQFYSM
SPSYQSNCLYLLTLQTIDSGDDEDKGGDSPRTTWVDKMRGELVGVNCGYF
AAEIEVQFSASFNDAWSYPAMILLFCILHMCVLCCRIGFILARRRYGRNF
MVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECA
ICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPPLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD