mRNA_F-distichus_contig10506.444.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10506.444.1
Unique NamemRNA_F-distichus_contig10506.444.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A6H5JDM9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM9_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 3.130e-86
Identity = 163/265 (61.51%), Postives = 185/265 (69.81%), Query Frame = 1 
Query:  379 GADEEAAKRERADGLESLREFPAMVLPKDAVVGSGQNSGPLPSQFYSMSPSYQSNCLYLLTLQTI--DSGDDED--------KGGDSP---RTTWVDKMRGELVGVNCGYFAAEIEVQFSASF-----NDAWSYPAMILLFCILHMCVLCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPPLE 1119
            GADEE A  E A  L   REFPAMV+PK AV    Q SGPLPSQ+YS+   Y   CL+LLTLQT+  D G +ED        KGGD     R    D MRGE+VGVNC  F+A IEVQ S S      + A SY  +  + C+L MC+ CCR+G +LA+RRYGRNFMVP+RFQPPKFDY RPIPPEL EQ   ETAGGQ SEE RD+EAGN +EC ICYA+VD  L DYMLTPCDHVFHQGCL RWMD+K  CPTCR+ELPP LE
Sbjct:  512 GADEEEAG-EAAAAL--AREFPAMVVPKVAVAAESQESGPLPSQWYSLRKEYGQGCLFLLTLQTVEEDKGWNEDSFIGAVGEKGGDEASIARKPLADLMRGEMVGVNCD-FSAVIEVQLSPSTLRTAQSQAVSYSVLFTMVCVLQMCLFCCRVGLMLAQRRYGRNFMVPQRFQPPKFDYRRPIPPELVEQARTETAGGQPSEESRDLEAGNCLECTICYAAVDAELGDYMLTPCDHVFHQGCLTRWMDIKTTCPTCRQELPPALE 772
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: D8LPM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM4_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 2.650e-54
Identity = 121/215 (56.28%), Postives = 147/215 (68.37%), Query Frame = 1 
Query:  379 GADEEAAKRERADGLESL-REFPAMVLPKDAVVGSGQNSGPLPSQFYSMSPSYQSNCLYLLTLQTI--DSGDDED--------KGGD---SPRTTWVDKMRGELVGVNCGYFAAEIEVQFSASF-----NDAWSYPAMILLFCILHMCVLCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVE 966
            GADEE    E  + + +L REFPAMV+PK AV   GQ SGPLPSQ+Y++   Y   CL+LLTLQT+  D G D+D        +GGD   + R    D MRGE+VGVNC  F+A IEVQ S S      + A +Y  +  + C+L MC+LCCR+G +LA+RRYGRNFMVP+RFQPPKFDYHRPIPPEL EQ   ETAGGQ SEE RD+EAGN +E
Sbjct:  513 GADEE----EAGEAVAALTREFPAMVVPKVAVATDGQESGPLPSQWYNLRKEYGQGCLFLLTLQTVEEDKGWDDDGIIGAVGEEGGDEAANARKPLADLMRGEMVGVNCD-FSAVIEVQLSPSTLRTAQSQAVNYSVVFTMVCLLQMCLLCCRVGLMLAQRRYGRNFMVPQRFQPPKFDYHRPIPPELVEQAQTETAGGQPSEESRDLEAGNCLE 722
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A7S2HH52_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HH52_9STRA)

HSP 1 Score: 116 bits (291), Expect = 7.900e-25
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 1 
Query:  778 RIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELP 1107
            ++G +  ++R G  FM+P +F P K++Y RP+PP LA Q S++T           +E G+ +EC ICY+++D A  DYM+TPCDH+FH  CL RWM+ KMECP CR  LP
Sbjct:  218 QVGILYLQQRIGPRFMIPAQFLPAKYNYMRPLPPALA-QTSQDT-----------VENGSSLECVICYSTIDQATRDYMITPCDHIFHPTCLERWMEQKMECPVCRHVLP 315
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A835Z9L2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L2_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.580e-23
Identity = 54/123 (43.90%), Postives = 77/123 (62.60%), Query Frame = 1 
Query:  748 CILHMCVLCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIP--PELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPP 1110
            C+L +  +  ++  IL + R+G +F +P RF P K++Y+RP+P  P+     + ETA         D+E G   ECAICY  VD +L  +M+TPCDH FH  CL +W+++KMECPTCR  LPP
Sbjct:  181 CVLLVLWVSVQVCVILMQDRFGPHFFIPARFLPQKYNYYRPVPSGPQYEAAETSETA---------DLETGTGPECAICYNVVDPSLRTHMVTPCDHCFHTECLQQWINIKMECPTCRSTLPP 294
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A7S1E5W2_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E5W2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.030e-21
Identity = 56/146 (38.36%), Postives = 72/146 (49.32%), Query Frame = 1 
Query:  790 ILARRRYGRNFMVPRRFQPPKFDYHRPIPPEL-----------AEQVSRETAGGQDSEEGRDIEAGN----------------------------LVECAICYASVDGALE-DYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELP 1107
            ++A+ +YG  FM+P RF PPKFDYHR IPP L           +EQV   TA    +E       G                              ++C IC   +D   +  YML PC+H+FH+ CL++WMDVKMECPTCR ELP
Sbjct:   15 LIAQSKYGARFMIPARFLPPKFDYHRAIPPSLLPPEAEEQDMKSEQVKPSTAPTLQNESPEHTTTGTRNRLKKKNGSQEHVTTTMTTEAVEVPTPALDCVICCNGIDHHNQKSYMLAPCEHIFHKDCLIQWMDVKMECPTCRTELP 160
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A5J4XT81_9CHLO (Putative RING finger-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XT81_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 1.710e-20
Identity = 60/127 (47.24%), Postives = 76/127 (59.84%), Query Frame = 1 
Query:  745 FCILHMCVLCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPP-ELAEQVSRETAGGQDSEEG-RDIEAGNL-VECAICYASVD-GALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPP 1113
            FC++ +  L  +   +L +  +G  + VP+RF P K+DYHRP+ P E+AE       G  DS  G  D+E G+  VEC IC    D G     M+TPC+H FH  CL RWMDVKMECPTCRR LP P
Sbjct:  482 FCMVLVAWLSLQAAVLLCQTVWGPRWFVPKRFLPAKYDYHRPVVPREVAE-------GALDSSSGPADVETGDAGVECVICMNPADVGQPRTRMVTPCNHFFHNHCLQRWMDVKMECPTCRRSLPTP 601
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A1E7F5Z1_9STRA (RING-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5Z1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 9.710e-19
Identity = 55/161 (34.16%), Postives = 76/161 (47.20%), Query Frame = 1 
Query:  784 GFILARRRYGRNFMVPRRFQPPKFDYHRPIPPEL--------------AEQVSRET---------------------AGGQDSEEGRDIEA----------------GNLVECAICYASVDGALE-DYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPP 1110
            G + A+ R+G  FM+P +F PPK+DY RPIP  L              +EQ+ +E                       G ++ +EG  +                     V+C ICY  +D      YML+PCDH+FH+ CL++WMDVKMECP CR +LPP
Sbjct:   46 GILDAQGRFGARFMIPAQFLPPKYDYSRPIPASLLSSYDDDETATANPSEQLQKEREIPKTEVSLVVPSKRDTSPRGGGARNRKEGNKLNRTDTMTAETVMAVPKNPSTCVDCVICYNEIDTINRMAYMLSPCDHIFHKDCLVQWMDVKMECPICRTQLPP 206
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: D3AZF4_POLPP (RING-type domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZF4_POLPP)

HSP 1 Score: 101 bits (252), Expect = 1.140e-18
Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = 1 
Query:  769 LCCRIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPP 1110
            +C +I  +  + RYG  F +P+RF PPK+ Y RPI   +           ++ EEG+         C IC   V+    DYM+TPC+H+FH  CL+RWMD KMECPTCRR +PP
Sbjct:  442 MCTQIFALYLQDRYGPTFFIPKRFLPPKYQYTRPISMSI-----------RNREEGQG--------CVICMNDVEANDSDYMITPCEHLFHSRCLLRWMDYKMECPTCRRTIPP 536
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A8J9WR16_9CHLO (Transmembrane E3 ubiquitin-protein ligase FLY1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR16_9CHLO)

HSP 1 Score: 101 bits (251), Expect = 2.050e-18
Identity = 51/114 (44.74%), Postives = 69/114 (60.53%), Query Frame = 1 
Query:  778 RIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNL-VECAICYASVD-GALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPP 1113
            ++  +L + R+G    +P+RF P K+DYHR  P       +R     ++++  RDIE G+  VEC IC   +D       M+TPC+H FH  CL RWMDVKMECPTCR+ LPPP
Sbjct:  496 QVAVLLVQTRWGPRCFIPKRFLPAKYDYHRRAP-------ARPPQAPEEAQGPRDIETGDAGVECVICMNPLDVERTSARMVTPCNHFFHPDCLNRWMDVKMECPTCRQLLPPP 602
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BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Match: A0A662YGN9_9STRA (RING-type domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGN9_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.300e-18
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = 1 
Query:  778 RIGFILARRRYGRNFMVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECAICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPP 1113
            ++G +  ++RYG  F VP RF P K++Y R I     +Q++   +GG  S      +  N V+C IC   +D    DYM+ PCDH+FH+ CL  WM VKMECPTCR  LP P
Sbjct:  651 QVGVLALQQRYGPRFFVPARFLPVKYNYERRI---NLQQMALLHSGGSAS-----CDEDNSVDCVICMVEIDVDARDYMIAPCDHIFHRECLQGWMQVKMECPTCRCVLPEP 754
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10506.444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDM9_9PHAE3.130e-8661.51RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LPM4_ECTSI2.650e-5456.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2HH52_9STRA7.900e-2547.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z9L2_9STRA2.580e-2343.90RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1E5W2_9STRA4.030e-2138.36Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A5J4XT81_9CHLO1.710e-2047.24Putative RING finger-like n=1 Tax=Trebouxia sp. A1... [more]
A0A1E7F5Z1_9STRA9.710e-1934.16RING-type domain-containing protein n=1 Tax=Fragil... [more]
D3AZF4_POLPP1.140e-1842.98RING-type domain-containing protein n=1 Tax=Polysp... [more]
A0A8J9WR16_9CHLO2.050e-1844.74Transmembrane E3 ubiquitin-protein ligase FLY1 n=1... [more]
A0A662YGN9_9STRA2.300e-1843.75RING-type domain-containing protein (Fragment) n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10506contigF-distichus_contig10506:4580..10555 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.5
Seed ortholog evalue9.4e-21
Seed eggNOG ortholog159749.K0TNA2
KEGG koko:K06030
KEGG TC9.B.25.1,9.B.25.2
KEGG Pathwayko04137,ko04214,ko04621,map04137,map04214,map04621
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000151,GO:0000209,GO:0000322,GO:0000323,GO:0000324,GO:0003006,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009664,GO:0009791,GO:0009827,GO:0009845,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010154,GO:0010191,GO:0010393,GO:0010467,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016485,GO:0016567,GO:0016740,GO:0017144,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0022414,GO:0023052,GO:0030163,GO:0031090,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031984,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032933,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034067,GO:0034613,GO:0035103,GO:0036211,GO:0042175,GO:0042545,GO:0043161,GO:0043162,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044695,GO:0045229,GO:0045488,GO:0045893,GO:0045935,GO:0045944,GO:0046872,GO:0046914,GO:0048316,GO:0048363,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051603,GO:0051604,GO:0051641,GO:0051716,GO:0060255,GO:0061458,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0070727,GO:0071501,GO:0071554,GO:0071555,GO:0071669,GO:0071704,GO:0071840,GO:0080001,GO:0080090,GO:0080134,GO:0080135,GO:0090351,GO:0098588,GO:0098791,GO:0098796,GO:0098827,GO:0140096,GO:1900037,GO:1900039,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1990234,GO:2000112,GO:2001141
EggNOG free text desc.zinc-RING finger domain
EggNOG OGs2XC12@2836,COG5540@1,KOG0828@2759
COG Functional cat.O
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko04131
Exons7
Model size2623
Cds size750
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928971.8163168-UTR-F-distichus_contig10506:4579..60801622928971.8163168-UTR-F-distichus_contig10506:4579..6080Fucus distichus monoicousUTRF-distichus_contig10506 4580..6080 -
1690885087.089701-UTR-F-distichus_contig10506:4579..60801690885087.089701-UTR-F-distichus_contig10506:4579..6080Fucus distichus monoicousUTRF-distichus_contig10506 4580..6080 -
1622928971.8978758-UTR-F-distichus_contig10506:9563..97921622928971.8978758-UTR-F-distichus_contig10506:9563..9792Fucus distichus monoicousUTRF-distichus_contig10506 9564..9792 -
1690885087.2073936-UTR-F-distichus_contig10506:9563..97921690885087.2073936-UTR-F-distichus_contig10506:9563..9792Fucus distichus monoicousUTRF-distichus_contig10506 9564..9792 -
1622928971.9075258-UTR-F-distichus_contig10506:10412..105551622928971.9075258-UTR-F-distichus_contig10506:10412..10555Fucus distichus monoicousUTRF-distichus_contig10506 10413..10555 -
1690885087.216315-UTR-F-distichus_contig10506:10412..105551690885087.216315-UTR-F-distichus_contig10506:10412..10555Fucus distichus monoicousUTRF-distichus_contig10506 10413..10555 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928971.8335817-CDS-F-distichus_contig10506:6080..62361622928971.8335817-CDS-F-distichus_contig10506:6080..6236Fucus distichus monoicousCDSF-distichus_contig10506 6081..6236 -
1690885087.104382-CDS-F-distichus_contig10506:6080..62361690885087.104382-CDS-F-distichus_contig10506:6080..6236Fucus distichus monoicousCDSF-distichus_contig10506 6081..6236 -
1622928971.8446794-CDS-F-distichus_contig10506:6626..66981622928971.8446794-CDS-F-distichus_contig10506:6626..6698Fucus distichus monoicousCDSF-distichus_contig10506 6627..6698 -
1690885087.1156194-CDS-F-distichus_contig10506:6626..66981690885087.1156194-CDS-F-distichus_contig10506:6626..6698Fucus distichus monoicousCDSF-distichus_contig10506 6627..6698 -
1622928971.8572078-CDS-F-distichus_contig10506:6845..69591622928971.8572078-CDS-F-distichus_contig10506:6845..6959Fucus distichus monoicousCDSF-distichus_contig10506 6846..6959 -
1690885087.1310346-CDS-F-distichus_contig10506:6845..69591690885087.1310346-CDS-F-distichus_contig10506:6845..6959Fucus distichus monoicousCDSF-distichus_contig10506 6846..6959 -
1622928971.867892-CDS-F-distichus_contig10506:8053..81401622928971.867892-CDS-F-distichus_contig10506:8053..8140Fucus distichus monoicousCDSF-distichus_contig10506 8054..8140 -
1690885087.144934-CDS-F-distichus_contig10506:8053..81401690885087.144934-CDS-F-distichus_contig10506:8053..8140Fucus distichus monoicousCDSF-distichus_contig10506 8054..8140 -
1622928971.8781545-CDS-F-distichus_contig10506:8718..88441622928971.8781545-CDS-F-distichus_contig10506:8718..8844Fucus distichus monoicousCDSF-distichus_contig10506 8719..8844 -
1690885087.1551251-CDS-F-distichus_contig10506:8718..88441690885087.1551251-CDS-F-distichus_contig10506:8718..8844Fucus distichus monoicousCDSF-distichus_contig10506 8719..8844 -
1622928971.8880522-CDS-F-distichus_contig10506:9368..95631622928971.8880522-CDS-F-distichus_contig10506:9368..9563Fucus distichus monoicousCDSF-distichus_contig10506 9369..9563 -
1690885087.1657183-CDS-F-distichus_contig10506:9368..95631690885087.1657183-CDS-F-distichus_contig10506:9368..9563Fucus distichus monoicousCDSF-distichus_contig10506 9369..9563 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10506.444.1prot_F-distichus_contig10506.444.1Fucus distichus monoicouspolypeptideF-distichus_contig10506 6081..9563 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10506.444.1

>prot_F-distichus_contig10506.444.1 ID=prot_F-distichus_contig10506.444.1|Name=mRNA_F-distichus_contig10506.444.1|organism=Fucus distichus monoicous|type=polypeptide|length=250bp
MVGADEEAAKRERADGLESLREFPAMVLPKDAVVGSGQNSGPLPSQFYSM
SPSYQSNCLYLLTLQTIDSGDDEDKGGDSPRTTWVDKMRGELVGVNCGYF
AAEIEVQFSASFNDAWSYPAMILLFCILHMCVLCCRIGFILARRRYGRNF
MVPRRFQPPKFDYHRPIPPELAEQVSRETAGGQDSEEGRDIEAGNLVECA
ICYASVDGALEDYMLTPCDHVFHQGCLMRWMDVKMECPTCRRELPPPLE*
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mRNA from alignment at F-distichus_contig10506:4580..10555-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10506.444.1 ID=mRNA_F-distichus_contig10506.444.1|Name=mRNA_F-distichus_contig10506.444.1|organism=Fucus distichus monoicous|type=mRNA|length=5976bp|location=Sequence derived from alignment at F-distichus_contig10506:4580..10555- (Fucus distichus monoicous)
GTCACGTGGGGGGCAAGCGAGGATAAGTTGGTAGAAAGTGTGGGAGAGAG
GTTACGGGGGCGGGGTAGTGAACGAGATGGACTCGGGGGGGCGCGAACGA
GGCAATGGGGCCAAGTTTTGGAGCAAGGCGAACGCGTTCGAAGGTCAGCC
GTGCAGCGTCTCTGGTGATCTGCGGCCCTTTTTGTGGAGACGCTCCTGAT
AGAATTTTTGGGTTCATGTGAAATGATATTCGGCTGCTGTAAATCTGGGA
TGTCCCATCGTCCAATAGAGTCTTGAGTGGTGAAATATTATGGTATCAAT
ACTACATTTGCACCTGGTCTGTATGCCCTTTAAAAAGTGTTACTTGACCT
CTTCCGTCAAGTATTCAGAGCGGCAGGTACGAAAAAGAGTTGCTGAGTCG
TGGTGTGTCGGTTTGATGCGGAATGCATTGCACCGCAAGTGTTGCTGGCT
TCTGTGTGGCACGTACCTTCTCTTGCGGAGCTGGATGCGCGTCGCAGGGC
CGAGTTGGTCGTGCGCCCCATTTTCCGATCTGCGGGGGGTTAGGGTTCCC
ATCTGACTCTGGTCGTCTGTTCATAGACCTCAAAAATAGTGGCTGTTATA
AGGTCAATGTCGCTGTCTGACCACCGCTTCTCGCTTGCGTGAGTATACCG
CGTTTTCCCTCCCCGCGGATCTTGGAATGATGGGGAGTACGATAAACGAT
AAAGCTCTTGCCCAGCATGTACTTGCCCATCCGCCCTGCTATGCTGCGTG
AACCCCTCGGCAGAGGTCGGGCACAGCCATCTGATGAGCAGGATGGAGTG
GCTCACGACGACGCAATCCGCTACAGGGACGGCGGTGGTAGCAGACAGCG
ACATCTCGACGCCACCAAAGTGACTCCGGCGCCAACGACTGCGAAAGTTT
TGTTGAGCGCGGAAAACATCGCCGTTGCTGAGTCGGGCGTTGCGCTTCAG
GCGCTCGATTCGGCCCAATCTGCGGGGATAGTGCCTGGGGTAATGGTGGG
GGCTGATGAAGAGGCGGCGAAGAGGGAGCGAGCCGATGGGTTGGAAAGTT
TGCGGGAGTTTCCGGCGATGGTGCTTCCCAAGGATGCGGTGGTGGGCTCC
GGTCAAAACTCCGGGCCGTTGCCCTCCCAGTTTTATTCTATGTCCCCGAG
CTACCAATCTAACTGCCTGTATCTGCTGACGTTGCAGGTGCGTTAAGATT
CCTTAGACAAAACGAAATGTTGTGGGGTTGGTGCATCACAACAATACTCC
ACGCACACGGCAAGGCGTCCCGCAGCGCGCGCAAAAAAGGGGCGCTCCCG
ATGGCCGGGTCGAACCGTTGAGGCGTGGTGTGTTACTGCGGTTAGTAAGA
TGAAATTTCTGTGTCGGGGGGCCGACGAACGTTGGCGTTGTGTTGAATAT
TGTGCGTTTCGCAGGGCCGGTCATTTCAGGATCCGCCACGTCCGTAACTA
TAACGTGATTTCGCGTCTCGCGCACGGAGCACGACGTGGGTCCTGTCATA
CCATGCCGTGTCGGGCGAAGACGACTATGACGATGACGATGTGTAATGTT
CCTCACGTGGTGGCATCGATGGCCACACGTTTCGCCCAATCGTGTTGGCG
ATTTGGTGATCTGACCGTTGGCCCCTCGGTGTAGTGCGTGCGGTGTCCGC
AAGATGAAGCAGAGAATGATATTTCCCTCGCCCACCGATCGCGCGGTCTG
CTGTGAGACAGACGATTGATAGCGGAGACGACGAGGACAAAGGGGGCGAC
AGTCCTCGCACGACATGGGTCGACAAAATGAGGGGAGAGCTGGTCGGAGT
TAACTGCGGCTACTTCGCAGCAGAGATTGAAGTTCAGGTGAAGCTTTCAA
ACGGATGCCGACGGCATACAACGGTAGAGCTCTACAAAAATATCCTCATT
CTACGTACGCTTTTGTTCTCCTCTGCTCCCCACTGCTCGTGGGTGCTCTA
GAATTGACAACTTAATTGTTTCCGCCATGCTGTCCAAGGTTTAAAAAAAT
TCGGTCAGGCATTCCTGTCCTGATCGGCGTAACCGTGTGTACGGCGTCGT
CCACCGAAAGCTGGCGGCGTTTCGCGTGTTTTTGTTGGTCCGAAGCTTTC
GGTCCGCGCGAAGGAACTGGTGTCCTCGAGAGAGCCTGCACAGCGGGGCG
CTGCTCGGATCGACGCATCTCGGAGCTCTTCCTTGATACTCGGGCTGTGT
GAACCCCCGGCTCTGTCGACTAAGTCGAAGCATGAACGTAGTGCCTCTCC
TGGCCTCTCTTGGAAGTGGCGCAACCCCATCACGAGCGGTGATGGTTTGC
AGTGGGGTACAAAATATTTTTGCCCACCAATCCATCCATCCGTACGGCGT
TGTTCTGTACCCACCCCTCTGCGGTTCTTTCTTCAACCGTGTGCGTCCTG
TACGTTCGTGAACAGTTTAGCGCATCATTCAACGATGCTTGGAGCTACCC
CGCCATGATCCTCTTGTTCTGCATTCTGCACATGTGTGTGCTCTGCTGTC
GGGTGAGACCCCCCCACCTCGCACACGTACCTGGTAGGACAGACAACGAC
GCTTGAGCTTGCGCGATACGATGCGGCCTCACACGGCAAAAGCTTGCCAT
ACCAAGGTGGTGGTATCGCGTGAGCCTGCGCATCGTTCAGCCGAAGAACA
CGGTCGTGTCTGAGTATGCGATCTGGCAGGGGCATCTCCGCTGTTGGTAT
CGCTAGTCTATTTTCGAGATTTGCACTTGTATTGGTATCCTCAAAAAAGT
CCATTTTCTCGCCATGCGCCCCGAAATGGTGCGATGGGCGTAAATGCTGA
CATTCGGGGGTTCCTACTGAGCCTCTGACTTTCAGTGACAAGCGCTTTGT
CATCCTTGGAGTAGTGCTTGTCGAGTAGCCAACGTCACGACACGCACCTT
GAGTGAAAACATCGATTGCCTTACCTGACGCTGCTTTTTAAGTCTTTTTC
GGTGCTGTCAGCATTCAACGCACGACATAAAAAACAGAGTCGCGCCCCCC
CCTTACATGCGATGCCTTCCATTTTATTATAACGGGGATCGGAGGTTCAC
CCTCCCTCTTGTAGGATGTTTTGTTTATGACGAGCGGGGTGACGGGTTTC
AACACTGTACCGAGGCCAGTTTCAAATGTCCGGTGGAGACGACAGGGCCT
GCGGTTCACTAAAATAAAGTATCTGCAACAATATACGCTTTTCCTTGGTG
GTGATCGCTCCGGGGCGTTCTCTGTTGAGATCGACGAAATGTGCAATACG
ATCTTCACGACTGACTCGACGAACAAATGTTGTCTCTCTTAGGCCCCAAA
ACGTACTCGACGAAGGCCATACCTCTGCGGTTGGTAGTTCTTGCCTCACG
CACCGCGCCATACCGTATTCTGTCCATCCTACCTTTGCGCGTAGTGTGCT
TATCTATTGTGGCGTGACTCGTCCAGTTGAGACGCTTGAAAAAAATAAGC
TTTAGATTTGTAGCGTTCACCGCGGTACGTGGGGCTGCTCCGTCTTCCAG
TGTCTCGAGAAGGGCGTGTCCTATAGAGCGGTGGTCCTACCAGTAAAACA
TAATTGCGTGACTTCAGTCGGCGTCCCTACCTCAAATTCTCACCAGATTG
GCTTCATACTAGCAAGGAGGAGGTACGGGCGAAACTTCATGGTTCCTCGG
AGATTCCAGCCGCCCAAGTTCGACTACCACCGACCGATCCCTCCCGAGTT
GGCCGAACAGGTAAAAGCGGAGTTATTTCCCCTCTATGAGTTTTTTGCAC
CCTTCCGTTCAACTCATGTCAACTTGAGGCCTTGCTGATGCTGTGTGTGA
TCATTGCCGTTGCCCCTTGACGGGGTACTTGGCGTGCTGCATTCTCCGCT
ATTTCAGGTCAGCCGAGAAACGGCTGGCGGGCAAGACAGCGAAGAAGGGC
GAGACATCGAAGCGGGCAACCTTGTGGAGGTGAGCTGAAGCCCTCGCGAG
GCGTGAACAGCGCCGCCATCCTATTATATTGTTAATAGTATAGAGCTATG
TTATTAGTAGTAGAGATGTGCGCGGAAGGGTTGCGGAGTCATGCTATCCC
GTTTTAGGGCACAGTTTATATTTGTCCCCGCTCCGTCCATGGATGCAGAA
GAGTGAAGACGATGCAGTACTGTAGTAGCGCATCACCTTAACCAGTGCTC
TGGGTGAGCGGTGATTCGTCCCATTGAGAGATACCTGGTAAGACGAAACC
GACACCCTCCTTAAAGACGGCGGACAGGACTCTCCCACTCCCCCCCCCGC
CAACCCCTGTTCGCCTAATCTTTCCCATCTCCCCTCCCGCCGTCCACCGT
CCGCCTGTTTTTTCTTCAGTGTGCAATTTGCTACGCGTCCGTTGACGGGG
CGCTTGAGGATTACATGTTGACGCCGTGCGATCATGTGTTTCACCAGGGC
TGCCTCATGCGGTGGATGGATGTCAAAATGGAGTGCCCAACATGTAGGCG
TGAATTGCCCCCACCGTTGGAATAGCGGCGCCTTTGCTCTTGCAAGTCTT
TTGACATGCTTTGGATATCTCGCCGACGTGTTTTGAGGGTTGCAATCGTC
TGATTGCAACCGTTGGGTTAGGTTTCACTCGGCGGGAGCTGACTTGATGA
CCATGGGGGGGAAGAATCACTGTCGGGGGCGGTGGCGGTGGCAATTGTTT
TCGGAGCGCGCGCGTTTGCTTTGGGCGTCTACCTACAGCATATTAGAACC
TCAGCTAAGCAAAATCACTCCAAGTACTTTTACTGCACAGGTAATTTGAA
TGTTGGATTTCCATTAATAGTCGCATTCCGCCATAGAACGTAGAAAGCGT
CATGGTTGAACGTCGAGAAACGCCCTCGTAACCCTCTCAGGAAGAGATTA
TCTTGCCTTCCCAAAAACCCTGTACTGGTATATTTATCTCGTCCTTTTTG
TCTCTTGGGTGTGTCCGTAATCTAAGTTTTCGTAGCGGGCCAAGGCCCAC
TGTCTGCTGCACTGTGTTTATATGATTCATACTCGGCGTGTACGTGTGAA
GGGTCGAGAGCCTCTCTCTTCCGCTGGGTGTGTTGGGTGTGTCGGTGCGA
AGTGAAGAGGTAGTTTGCGCCCTTTCCGAGAGTCTTCGGGTTTTATTGTT
GGCAACTGGCGTGTGCACTTTCATGCGTTCGCTCAACATTCGTAACGGAA
AAAAAACGCCTGCTTACGTTCGAATCCTTGGCGCTGAAGACGGCCTTTCG
TCAAGAGATACCTCGTATACAGCTGCGTTTTTCCCCCTTATAGGCGTCGA
CGTGTCGTTTGTGTCTGGGCGTACGCGTGACCCGCTTGCGCTTGCGGTGG
AGTGGGCCCTGGAGGCGGTCAGTACGAGCCAGGCGTGGAAGGGATGTAGT
CAGGTCTCGTTGGGTTAGCAAACGAATGGATCGTGTTGACGGTGCTAGCG
CAAACAGTTCTCTTGTTTTGGGGTTTGTCCCTGACGAACCTGTCCCAAGT
TCCGTCAAGGATGCAGCTGTTGTTACCTTGTATGTTTCTGTTAGGGCTTT
TGTGGTTTTCGCACATCGGACCCAAATGGCACACGGCACACGAAGGTAGA
GCTTTGTAGTTTGTACTTGATCACGAGAAAATGGCGTTGTCTTGCCTTAA
ATTTCCTCCAACGACATTGCCAGGAGCAGTGTTGCCGTTCACTTGGGATG
TTGATAAATGGTACTGATACCTGGTAGAGGTTGGGCGTGTTAGACTTGAT
ACGGCAGTCTAGGATGATTTTATACATACATATATACATGTATATATATA
TATAACTCTCTTCCTAACAGATTAGACCGAGCGAGGCTTCTTATATTTTT
GTATCAAGATAATTTGACTGGACTCTATTCGACTCTCCCTTCGAATTATT
TTTCAGGTCTGATTTTTGCTCTTCAACTAAAATGTGTGTATAGCCATCTA
TGGATCAACCGGGTGAGGTTGCTAATCCTGCTTGTGGTCAGCTGAACAGG
GAGAATTGTTTTTTATTCGTGTCCCC
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Coding sequence (CDS) from alignment at F-distichus_contig10506:4580..10555-

>mRNA_F-distichus_contig10506.444.1 ID=mRNA_F-distichus_contig10506.444.1|Name=mRNA_F-distichus_contig10506.444.1|organism=Fucus distichus monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at F-distichus_contig10506:4580..10555- (Fucus distichus monoicous)
ATGGTGGGGGCTGATGAAGAGGCGGCGAAGAGGGAGCGAGCCGATGGGTT
GGAAAGTTTGCGGGAGTTTCCGGCGATGGTGCTTCCCAAGGATGCGGTGG
TGGGCTCCGGTCAAAACTCCGGGCCGTTGCCCTCCCAGTTTTATTCTATG
TCCCCGAGCTACCAATCTAACTGCCTGTATCTGCTGACGTTGCAGATGGT
GGGGGCTGATGAAGAGGCGGCGAAGAGGGAGCGAGCCGATGGGTTGGAAA
GTTTGCGGGAGTTTCCGGCGATGGTGCTTCCCAAGGATGCGGTGGTGGGC
TCCGGTCAAAACTCCGGGCCGTTGCCCTCCCAGTTTTATTCTATGTCCCC
GAGCTACCAATCTAACTGCCTGTATCTGCTGACGTTGCAGACGATTGATA
GCGGAGACGACGAGGACAAAGGGGGCGACAGTCCTCGCACGACATGGGTC
GACAAAATGAGGGGAGAGCTGGTCGGAGTTAACTGCGGCTACTTCGCAGC
AGAGATTGAAGTTCAGACGATTGATAGCGGAGACGACGAGGACAAAGGGG
GCGACAGTCCTCGCACGACATGGGTCGACAAAATGAGGGGAGAGCTGGTC
GGAGTTAACTGCGGCTACTTCGCAGCAGAGATTGAAGTTCAGTTTAGCGC
ATCATTCAACGATGCTTGGAGCTACCCCGCCATGATCCTCTTGTTCTGCA
TTCTGCACATGTGTGTGCTCTGCTGTCGGTTTAGCGCATCATTCAACGAT
GCTTGGAGCTACCCCGCCATGATCCTCTTGTTCTGCATTCTGCACATGTG
TGTGCTCTGCTGTCGGATTGGCTTCATACTAGCAAGGAGGAGGTACGGGC
GAAACTTCATGGTTCCTCGGAGATTCCAGCCGCCCAAGTTCGACTACCAC
CGACCGATCCCTCCCGAGTTGGCCGAACAGATTGGCTTCATACTAGCAAG
GAGGAGGTACGGGCGAAACTTCATGGTTCCTCGGAGATTCCAGCCGCCCA
AGTTCGACTACCACCGACCGATCCCTCCCGAGTTGGCCGAACAGGTCAGC
CGAGAAACGGCTGGCGGGCAAGACAGCGAAGAAGGGCGAGACATCGAAGC
GGGCAACCTTGTGGAGGTCAGCCGAGAAACGGCTGGCGGGCAAGACAGCG
AAGAAGGGCGAGACATCGAAGCGGGCAACCTTGTGGAGTGTGCAATTTGC
TACGCGTCCGTTGACGGGGCGCTTGAGGATTACATGTTGACGCCGTGCGA
TCATGTGTTTCACCAGGGCTGCCTCATGCGGTGGATGGATGTCAAAATGG
AGTGCCCAACATGTAGGCGTGAATTGCCCCCACCGTTGGAATAGTGTGCA
ATTTGCTACGCGTCCGTTGACGGGGCGCTTGAGGATTACATGTTGACGCC
GTGCGATCATGTGTTTCACCAGGGCTGCCTCATGCGGTGGATGGATGTCA
AAATGGAGTGCCCAACATGTAGGCGTGAATTGCCCCCACCGTTGGAATAG
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