prot_F-distichus_contig103037.268.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig103037.268.1
Unique Nameprot_F-distichus_contig103037.268.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length52
Homology
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BLAST of mRNA_F-distichus_contig103037.268.1 vs. uniprot
Match: D7FMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD5_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 3.120e-17
Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 0 
Query:    2 VKRLKILLSKLQKSNQSKDADIAALKTP-PPPKVFTVDLRVRYRGSVWCLLR 52
            VKRLK LLSKLQKS+ SKDAD+AALK P PPPK FTV LRVR+ GS WC ++
Sbjct:    2 VKRLKSLLSKLQKSSHSKDADLAALKAPAPPPKAFTVALRVRHEGSTWCFVK 53
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BLAST of mRNA_F-distichus_contig103037.268.1 vs. uniprot
Match: A0A6H5KSR4_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR4_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 6.550e-15
Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 0 
Query:    2 VKRLKILLSKLQKSNQSKDADIAALKTP-PPPKVFTVDLRVRYRGSVWCLLR 52
            VKRLK LLSKLQKS+ SKDAD+AALK P PPPK FTV LRVR+ GS WC ++
Sbjct: 1171 VKRLKSLLSKLQKSSHSKDADLAALKAPAPPPKAFTVALRVRHEGSTWCFVK 1222
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103037.268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMD5_ECTSI3.120e-1773.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSR4_9PHAE6.550e-1573.08GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig103037contigF-distichus_contig103037:352..507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig103037.268.1mRNA_F-distichus_contig103037.268.1Fucus distichus monoicousmRNAF-distichus_contig103037 352..507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig103037.268.1 ID=prot_F-distichus_contig103037.268.1|Name=mRNA_F-distichus_contig103037.268.1|organism=Fucus distichus monoicous|type=polypeptide|length=52bp
QVKRLKILLSKLQKSNQSKDADIAALKTPPPPKVFTVDLRVRYRGSVWCL
LR
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