prot_F-distichus_contig98701.19307.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig98701.19307.1
Unique Nameprot_F-distichus_contig98701.19307.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length62
Homology
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BLAST of mRNA_F-distichus_contig98701.19307.1 vs. uniprot
Match: A0A6H5JWS6_9PHAE (Magnesium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS6_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.460e-20
Identity = 46/50 (92.00%), Postives = 49/50 (98.00%), Query Frame = 0 
Query:   11 GVSMSSLNLHLRDLRQLFSSQSKSEPAISVRRNCILVNFETLRGIVLVDR 60
            GV MSSL+LHLRD+RQLFSSQSKSEPAISVRRNC+LVNFETLRGIVLVDR
Sbjct:  260 GVQMSSLSLHLRDMRQLFSSQSKSEPAISVRRNCVLVNFETLRGIVLVDR 309
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BLAST of mRNA_F-distichus_contig98701.19307.1 vs. uniprot
Match: D7FS76_ECTSI (Magnesium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS76_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.530e-20
Identity = 45/47 (95.74%), Postives = 47/47 (100.00%), Query Frame = 0 
Query:   14 MSSLNLHLRDLRQLFSSQSKSEPAISVRRNCILVNFETLRGIVLVDR 60
            MSSLNLHLRD+RQLFSSQSKSEPAISVRRNC+LVNFETLRGIVLVDR
Sbjct:    1 MSSLNLHLRDMRQLFSSQSKSEPAISVRRNCVLVNFETLRGIVLVDR 47
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98701.19307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWS6_9PHAE1.460e-2092.00Magnesium transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7FS76_ECTSI1.530e-2095.74Magnesium transporter n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.128.330coord: 11..62
e-value: 1.4E-9
score: 39.4

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.128.330coord: 11..62
e-value: 1.4E-9
score: 39.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98701contigF-distichus_contig98701:553..738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98701.19307.1mRNA_F-distichus_contig98701.19307.1Fucus distichus monoicousmRNAF-distichus_contig98701 553..738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig98701.19307.1 ID=prot_F-distichus_contig98701.19307.1|Name=mRNA_F-distichus_contig98701.19307.1|organism=Fucus distichus monoicous|type=polypeptide|length=62bp
MLCPCLSAGGGVSMSSLNLHLRDLRQLFSSQSKSEPAISVRRNCILVNFE
TLRGIVLVDRCV
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