mRNA_F-distichus_contig106408.549.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: D7G144_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G144_ECTSI) HSP 1 Score: 100 bits (249), Expect = 4.060e-23 Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 1
Query: 10 FIAQTLSLSVCVAVGFVVGTVGVFLIAEDTWPTYEMESRGNAWGLLTGIAIAIPSGMAVALSIL 201
F+ ++ SL +CV VGF+VG VGV I DTWPT+EME+RGNAWGLLTGIAIAIPSGMAVALSIL
Sbjct: 690 FLVESFSLLICVGVGFLVGMVGVNFIEADTWPTHEMETRGNAWGLLTGIAIAIPSGMAVALSIL 753
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: A0A6H5KJ96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ96_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 6.700e-22 Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = 1
Query: 10 FIAQTLSLSVCVAVGFVVGTVGVFLIAEDTWPTYEMESRGNAWGLLTGIAIAIPSGMAVALSIL 201
F+ ++ SL +CV VGF+VG VGV I DTWPT+EME+RGN WGLLTGI IAIPSGMAVALSIL
Sbjct: 709 FLVESFSLLICVGVGFLVGIVGVNFIEADTWPTHEMETRGNPWGLLTGIVIAIPSGMAVALSIL 772
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: A0A7S1YA91_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YA91_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.320e-12 Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 22 TLSLSVCVAVGFVVGTVGVFL-IAEDTWPTYEMESRGNAWGLLTGIAIAIPSGMAVALSIL 201
+LSL CV +G +VG F +AE+TWPT EM+ RG+ GLLTGIAIAIPSGM V LSIL
Sbjct: 1 SLSLLGCVLIGALVGIGAAFTPLAEETWPTNEMQIRGDPTGLLTGIAIAIPSGMGVCLSIL 61
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: A0A7S3UPM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPM3_HETAK) HSP 1 Score: 63.2 bits (152), Expect = 9.690e-11 Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 19 QTLSLSVCVAVGFVVGTVGVFLIAEDTWPTYEMESRGNAWGLLTGIAIAIPSGMAVALSIL 201
+ SL +CV +G VV V ++ WPT EME RG+ GL GIAIA+PSGM VALSIL
Sbjct: 6 EIFSLLLCVFMGIVVACVSYPFDVDELWPTAEMEGRGSWMGLNLGIAIAVPSGMGVALSIL 66
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: A0A7S2XSZ6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSZ6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 7.530e-10 Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 10 FIAQTLSLSVCVAVGFVVGTVGVFLIAEDTWPTYEMESRGNAWGLLTGIAIAIPSGMAVALSIL 201
F + +L +C+ VG + F + + WPT EM+ RG+ GL TGIAIAIPSGM V+LSIL
Sbjct: 451 FKVEIYALGICIFVGVSIALTAGFTDSAELWPTNEMQIRGDVEGLYTGIAIAIPSGMGVSLSIL 514
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: A0A0D2WJT9_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJT9_CAPO3) HSP 1 Score: 60.5 bits (145), Expect = 4.950e-9 Identity = 27/62 (43.55%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 16 AQTLSLSVCVAVGFVVGTVGVFLIAEDTWPTYEMESRGNAWGLLTGIAIAIPSGMAVALSIL 201
++ + LS+C+A+GF++GT+ + +WPT EM +RG+ G+ GI +AI SG VALS+L
Sbjct: 655 SEVIGLSICLAMGFIMGTIWTNWGPQFSWPTSEMAARGDWTGMYIGICVAIASGFGVALSVL 716
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: UPI00065BCC81 (uncharacterized protein LOC101851953 isoform X1 n=3 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BCC81) HSP 1 Score: 57.0 bits (136), Expect = 8.200e-8 Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 28 SLSVCVAVGFVVGTV-------GVFLIAEDTWPTYEMESRGNAWGLLTGIAIAIPSGMAVALSIL 201
L +C+ VGF+ G + G+ + D+WPT+EM SRG+ L G+ IAIPSG VALSIL
Sbjct: 362 GLVLCILVGFLTGFIPAVLELGGLSWRSSDSWPTFEMSSRGSLRSLPVGVLIAIPSGAGVALSIL 426
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: D8M6T4_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M6T4_BLAHO) HSP 1 Score: 54.3 bits (129), Expect = 2.860e-7 Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 16 AQTLSLSVCVAVGFVVGTVGVFLIAEDT------WPTYEMESRGNAWGLLTGIAIAIPSGMAVALSI 198
++ + + +C GF++G +G L + WPT EM +RG+A+ L+ G IA+PSG+ VAL+I
Sbjct: 49 SELIGIGICFVCGFIIGALGSPLALQTRGNIWPGWPTAEMVNRGDAYNLIIGFLIALPSGVGVALAI 115
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: A0A2L2YGY8_PARTP (Uncharacterized protein (Fragment) n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YGY8_PARTP) HSP 1 Score: 55.1 bits (131), Expect = 3.860e-7 Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 19 QTLSLSVCVAVGFVVGTV-----GVFLIAEDTWPTYEMESRGNAWGLLTGIAIAIPSGMAVALSIL 201
+TLSL +CV +GF +G V GV+ + WP EM SRG GL G+ IA+PSG VALS+L
Sbjct: 95 ETLSLFLCVIIGFTIGIVCQVLNGVWNNSRQ-WPNPEMISRGQERGLWIGVLIALPSGAGVALSVL 159
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Match: A0A0L0D8F2_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D8F2_THETB) HSP 1 Score: 54.7 bits (130), Expect = 5.340e-7 Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 19 QTLSLSVCVAVGFVVGTVGVFLIAEDT-WPTYEMESRGNAWGLLTGIAIAIPSGMAVALS 195
+ + L++C VG +VG +G +D WP EM SRG GLL GIAIA+PSG+ VALS
Sbjct: 393 ELVGLAICFVVGGLVG-LGFAAWGDDLDWPNSEMSSRGTGVGLLIGIAIAVPSGVGVALS 451 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106408.549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106408.549.1 >prot_F-distichus_contig106408.549.1 ID=prot_F-distichus_contig106408.549.1|Name=mRNA_F-distichus_contig106408.549.1|organism=Fucus distichus monoicous|type=polypeptide|length=69bp LVVFIAQTLSLSVCVAVGFVVGTVGVFLIAEDTWPTYEMESRGNAWGLLTback to top mRNA from alignment at F-distichus_contig106408:404..610- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106408.549.1 ID=mRNA_F-distichus_contig106408.549.1|Name=mRNA_F-distichus_contig106408.549.1|organism=Fucus distichus monoicous|type=mRNA|length=207bp|location=Sequence derived from alignment at F-distichus_contig106408:404..610- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106408:404..610- >mRNA_F-distichus_contig106408.549.1 ID=mRNA_F-distichus_contig106408.549.1|Name=mRNA_F-distichus_contig106408.549.1|organism=Fucus distichus monoicous|type=CDS|length=414bp|location=Sequence derived from alignment at F-distichus_contig106408:404..610- (Fucus distichus monoicous)back to top |