prot_F-distichus_contig99980.19425.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig99980.19425.1
Unique Nameprot_F-distichus_contig99980.19425.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length161
Homology
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BLAST of mRNA_F-distichus_contig99980.19425.1 vs. uniprot
Match: A0A6H5JKT8_9PHAE (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKT8_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 6.570e-45
Identity = 104/163 (63.80%), Postives = 115/163 (70.55%), Query Frame = 0 
Query:    1 QVTSKTQALHATCESLLEEQKRLEAQVNALSFPLERFRALEELGPALGLPFASPVRGDEVSKNGVAATARRSSGRISYGXXXXXXXXXXXXXXXXXXXXXXXPA--GSALLHPGSDDFAQALARAASAMSYLRGHPEFLESPQYIEKYSQLISRALALVKNQV 161
            QVTSKTQALHATCESLL EQ  LEAQV ALS PL+RFRAL+ELGPALGLPFAS  +       G     RR+S  +  G                XXXXXXX    G  LLHPGSD+FA+ALARAASAM+YLR HPEFLE PQY++KY QL+SRALALVKNQV
Sbjct:  134 QVTSKTQALHATCESLLSEQHTLEAQVKALSAPLQRFRALQELGPALGLPFAS--QSSASGAGGEGGAPRRTSVGVGAGGDGARWGGGTGLVRRAXXXXXXXXXXXGRVLLHPGSDEFAEALARAASAMAYLRRHPEFLEGPQYVDKYVQLLSRALALVKNQV 294
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BLAST of mRNA_F-distichus_contig99980.19425.1 vs. uniprot
Match: D7G064_ECTSI (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G064_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 6.550e-42
Identity = 104/163 (63.80%), Postives = 115/163 (70.55%), Query Frame = 0 
Query:    1 QVTSKTQALHATCESLLEEQKRLEAQVNALSFPLERFRALEELGPALGLPFASPVRGDEVSKNGVAATARRSSGRISYGXXXXXXXXXXXXXXXXXXXXXXXPA--GSALLHPGSDDFAQALARAASAMSYLRGHPEFLESPQYIEKYSQLISRALALVKNQV 161
            QVTSKTQALHATCESLL EQ  LEAQV ALS PL+RF AL ELGPALGLPFAS  +       G     RR+S  +  G              XXXXXXXXX    G  LLHPGSD+FA+ALARAASAM+YLR HPEF+E PQY++KY QL+SRALALVKNQV
Sbjct:  134 QVTSKTQALHATCESLLSEQHTLEAQVKALSAPLQRFGALRELGPALGLPFAS--QSSAGGAGGEDGAPRRASVGVGAGGDGARWGGGTGLVRXXXXXXXXXXXXXGRVLLHPGSDEFAEALARAASAMAYLRRHPEFIEGPQYVDKYVQLLSRALALVKNQV 294
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99980.19425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKT8_9PHAE6.570e-4563.80Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
D7G064_ECTSI6.550e-4263.80Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007265Conserved oligomeric Golgi complex, subunit 3PFAMPF04136Sec34coord: 113..161
e-value: 5.9E-9
score: 36.0
IPR007265Conserved oligomeric Golgi complex, subunit 3PANTHERPTHR13302CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3coord: 1..161

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007265Conserved oligomeric Golgi complex, subunit 3PFAMPF04136Sec34coord: 113..161
e-value: 5.9E-9
score: 36.0
IPR007265Conserved oligomeric Golgi complex, subunit 3PANTHERPTHR13302CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3coord: 1..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig99980contigF-distichus_contig99980:391..1419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig99980.19425.1mRNA_F-distichus_contig99980.19425.1Fucus distichus monoicousmRNAF-distichus_contig99980 391..1419 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig99980.19425.1 ID=prot_F-distichus_contig99980.19425.1|Name=mRNA_F-distichus_contig99980.19425.1|organism=Fucus distichus monoicous|type=polypeptide|length=161bp
QVTSKTQALHATCESLLEEQKRLEAQVNALSFPLERFRALEELGPALGLP
FASPVRGDEVSKNGVAATARRSSGRISYGGGGTVVGGGSGNLRRSSSFGG
GGPAGSALLHPGSDDFAQALARAASAMSYLRGHPEFLESPQYIEKYSQLI
SRALALVKNQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007265COG_su3