prot_F-distichus_contig98816.19322.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig98816.19322.1
Unique Nameprot_F-distichus_contig98816.19322.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length197
Homology
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BLAST of mRNA_F-distichus_contig98816.19322.1 vs. uniprot
Match: A0A6H5JA50_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA50_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 8.040e-19
Identity = 52/103 (50.49%), Postives = 61/103 (59.22%), Query Frame = 0 
Query:   94 RETFYELVDEAFGTTEWLRAVQGRGPGFDPCERMAVFLYRMGHSARARETAVLFGMSVGAVHYSTTSVAKRIRDVLNQRYVCWPGRTERRRISREWEVERDLR 196
            + TF  LV   FGTT   R V   GP  DPCER+AVFL+R+GH +  R TA  F M+ GAV   T SVA+RIR  L   YV WP   E+  IS  WE E+ LR
Sbjct:   12 KSTFRRLVHALFGTTYVFR-VNNTGPYIDPCERVAVFLFRVGHGSGVRATASHFNMAEGAVVNWTMSVARRIRKRLLCEYVRWPSPEEQSEISTAWEKEKSLR 113
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BLAST of mRNA_F-distichus_contig98816.19322.1 vs. uniprot
Match: A0A6H5JSG7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG7_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.150e-14
Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0 
Query:  117 RGPGFDPCERMAVFLYRMGHSARARETAVLFGMSVGAVHYSTTSVAKRIRDVLNQRYVCWPGRTERRRISREWEVERDLR 196
            RGP FDPCER+AVF++R+G  +  R+TA+ FG+S G V   T  VA+R+   L    V WP   E+R +S  WE+E+ LR
Sbjct:    7 RGPPFDPCERVAVFMWRLGGDSTVRQTALQFGLSDGTVSQVTLEVARRVDKYLRDECVWWPSPEEQRDMSAAWELEKHLR 86
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98816.19322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA50_9PHAE8.040e-1950.49DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JSG7_9PHAE1.150e-1447.50DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98816contigF-distichus_contig98816:448..1237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98816.19322.1mRNA_F-distichus_contig98816.19322.1Fucus distichus monoicousmRNAF-distichus_contig98816 170..1248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig98816.19322.1 ID=prot_F-distichus_contig98816.19322.1|Name=mRNA_F-distichus_contig98816.19322.1|organism=Fucus distichus monoicous|type=polypeptide|length=197bp
MDELSFPPMAHFLPALRAAGLIARKKRDDEEDDKPANEDFIKVLGVLDPH
DMADLIHGTTRDHNKDVPHPRRFWAREGLHMGSRTFSTMFRRMRETFYEL
VDEAFGTTEWLRAVQGRGPGFDPCERMAVFLYRMGHSARARETAVLFGMS
VGAVHYSTTSVAKRIRDVLNQRYVCWPGRTERRRISREWEVERDLR*
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