prot_F-distichus_contig98662.19302.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig98662.19302.1
Unique Nameprot_F-distichus_contig98662.19302.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length42
Homology
BLAST of mRNA_F-distichus_contig98662.19302.1 vs. uniprot
Match: A0A6H5L1C1_9PHAE (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1C1_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 4.190e-15
Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 LKALFPKGITLLGFKPLQSLRPDFNVRSPYFLYPDEESTTG 41
            LK L+PKG+ LLGF+P  +LRPDFN+RSPYFLYPDEESTTG
Sbjct:  340 LKGLYPKGLALLGFRPNNTLRPDFNIRSPYFLYPDEESTTG 380          
BLAST of mRNA_F-distichus_contig98662.19302.1 vs. uniprot
Match: A0A835ZF42_9STRA (SPOC like C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF42_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 9.950e-9
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    1 LKALFPKGITLLGFKPLQSLRPDFNVRSPYFLYPDEESTTG 41
            +K L P GI LLGFKPL  LR D  ++SPYFLYPDE+   G
Sbjct:  352 MKQLHPPGIVLLGFKPLSDLREDHTLKSPYFLYPDEQRMAG 392          
BLAST of mRNA_F-distichus_contig98662.19302.1 vs. uniprot
Match: A0A1Y2F6S9_9FUNG (DNA helicase n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2F6S9_9FUNG)

HSP 1 Score: 50.1 bits (118), Expect = 7.140e-6
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    8 GITLLGFKPLQSLRPDFNVRSPYFLYPDEESTTG 41
            G+TLLGFKPL  L+  +N++ PYF+YPDE    G
Sbjct:  341 GLTLLGFKPLSKLKFQYNIKHPYFIYPDENQYIG 374          
BLAST of mRNA_F-distichus_contig98662.19302.1 vs. uniprot
Match: A0A7S3Y266_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y266_HETAK)

HSP 1 Score: 49.7 bits (117), Expect = 9.760e-6
Identity = 19/34 (55.88%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    8 GITLLGFKPLQSLRPDFNVRSPYFLYPDEESTTG 41
            G TLLGFKP++S+  D N++SPYF+YP E++  G
Sbjct:  313 GFTLLGFKPIKSIGVDQNLKSPYFIYPSEDTVQG 346          
BLAST of mRNA_F-distichus_contig98662.19302.1 vs. uniprot
Match: A0A1Y3NPB1_PIRSE (ATP-dependent DNA helicase II subunit 1 n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NPB1_PIRSE)

HSP 1 Score: 48.5 bits (114), Expect = 2.500e-5
Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    8 GITLLGFKPLQSLRPDFNVRSPYFLYPDEESTTG 41
            G+TLLGFKP   L+  +N++ PYF+YPDE+   G
Sbjct:  198 GLTLLGFKPKSKLKFQYNIKHPYFIYPDEKQYVG 231          
BLAST of mRNA_F-distichus_contig98662.19302.1 vs. uniprot
Match: A0A1Y1VG66_9FUNG (ATP-dependent DNA helicase II subunit 1 n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VG66_9FUNG)

HSP 1 Score: 48.1 bits (113), Expect = 3.420e-5
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 0
Query:    8 GITLLGFKPLQSLRPDFNVRSPYFLYPDEESTTG 41
            G+TLLGFKP   L+  +N++ PYF+YPDE    G
Sbjct:  341 GLTLLGFKPKSKLKFQYNIKHPYFIYPDESQYVG 374          
BLAST of mRNA_F-distichus_contig98662.19302.1 vs. uniprot
Match: UPI001C71461F (X-ray repair cross-complementing protein 6-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C71461F)

HSP 1 Score: 47.8 bits (112), Expect = 4.680e-5
Identity = 18/38 (47.37%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    4 LFPKGITLLGFKPLQSLRPDFNVRSPYFLYPDEESTTG 41
            ++ +GI LLGFKP+ S++P ++++   FLYPDE+S  G
Sbjct:  339 VYEQGIELLGFKPIDSIKPYYHIKPANFLYPDEKSIQG 376          
BLAST of mRNA_F-distichus_contig98662.19302.1 vs. uniprot
Match: A0A0G4J6I8_PLABS (SAP domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J6I8_PLABS)

HSP 1 Score: 47.4 bits (111), Expect = 6.410e-5
Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    1 LKALFPKGITLLGFKPLQSLRPDFNVRSPYFLYPDEESTTG 41
            +K ++P G+ LLGFKPL+ L P  NV+   F+ PDE+  TG
Sbjct:  321 IKTVYPSGMQLLGFKPLEMLLPYHNVKPSLFVRPDEKRITG 361          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98662.19302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L1C1_9PHAE4.190e-1578.05SAP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZF42_9STRA9.950e-960.98SPOC like C-terminal domain-containing protein n=1... [more]
A0A1Y2F6S9_9FUNG7.140e-655.88DNA helicase n=1 Tax=Neocallimastix californiae Ta... [more]
A0A7S3Y266_HETAK9.760e-655.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Y3NPB1_PIRSE2.500e-552.94ATP-dependent DNA helicase II subunit 1 n=1 Tax=Pi... [more]
A0A1Y1VG66_9FUNG3.420e-552.94ATP-dependent DNA helicase II subunit 1 n=1 Tax=Pi... [more]
UPI001C71461F4.680e-547.37X-ray repair cross-complementing protein 6-like n=... [more]
A0A0G4J6I8_PLABS6.410e-548.78SAP domain-containing protein n=1 Tax=Plasmodiopho... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016194SPOC-like, C-terminal domain superfamilyGENE3D2.40.290.10coord: 6..41
e-value: 1.6E-10
score: 43.1
IPR016194SPOC-like, C-terminal domain superfamilySUPERFAMILY100939SPOC domain-likecoord: 6..40
IPR006164Ku70/Ku80 beta-barrel domainPFAMPF02735Kucoord: 2..41
e-value: 1.4E-8
score: 34.7

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016194SPOC-like, C-terminal domain superfamilyGENE3D2.40.290.10coord: 6..41
e-value: 1.6E-10
score: 43.1
IPR016194SPOC-like, C-terminal domain superfamilySUPERFAMILY100939SPOC domain-likecoord: 6..40
IPR006164Ku70/Ku80 beta-barrel domainPFAMPF02735Kucoord: 2..41
e-value: 1.4E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98662contigF-distichus_contig98662:1729..1854 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98662.19302.1mRNA_F-distichus_contig98662.19302.1Fucus distichus monoicousmRNAF-distichus_contig98662 1729..1854 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig98662.19302.1 ID=prot_F-distichus_contig98662.19302.1|Name=mRNA_F-distichus_contig98662.19302.1|organism=Fucus distichus monoicous|type=polypeptide|length=42bp
LKALFPKGITLLGFKPLQSLRPDFNVRSPYFLYPDEESTTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016194SPOC-like_C_dom_sf
IPR006164Ku70/Ku80_beta-barrel_dom