prot_F-distichus_contig96883.19139.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig96883.19139.1
Unique Nameprot_F-distichus_contig96883.19139.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length117
Homology
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BLAST of mRNA_F-distichus_contig96883.19139.1 vs. uniprot
Match: A0A835ZGD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGD1_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 3.460e-5
Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 0 
Query:   11 SEAFVREERDKMATKKATTVRYRKDLEKQVAETKARRMQLEMNDTEFKLNSDIVKKLESDKELVAQVKQRMDSA 84
            SEA  + E  K   K++  +RY  +LE+Q+AET+  R Q++M++TE  LN+D++ +LE+D  L  +VK RM +A
Sbjct:  337 SEADKQAEAAKRQRKRSAMLRYTAELERQMAETRRMRQQVDMSETEALLNADMIARLEADVALQGKVKARMGAA 410
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96883.19139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZGD1_9STRA3.460e-541.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..53

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96883contigF-distichus_contig96883:743..1979 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96883.19139.1mRNA_F-distichus_contig96883.19139.1Fucus distichus monoicousmRNAF-distichus_contig96883 126..2015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig96883.19139.1 ID=prot_F-distichus_contig96883.19139.1|Name=mRNA_F-distichus_contig96883.19139.1|organism=Fucus distichus monoicous|type=polypeptide|length=117bp
MELARRFISDSEAFVREERDKMATKKATTVRYRKDLEKQVAETKARRMQL
EMNDTEFKLNSDIVKKLESDKELVAQVKQRMDSARGLDTHDGGNRGEMDR
GNETSIQRHLISSSAA*
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