prot_F-distichus_contig96661.19122.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig96661.19122.1
Unique Nameprot_F-distichus_contig96661.19122.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length277
Homology
[Close]
BLAST of mRNA_F-distichus_contig96661.19122.1 vs. uniprot
Match: D8LI76_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI76_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.360e-50
Identity = 148/324 (45.68%), Postives = 172/324 (53.09%), Query Frame = 0 
Query:    1 RSLTPLSTTRQAAAENGLELVRKRGGQVLYGVAPETTESRYPRPNQHQPSQRVGAWSVCRAKRGTAPPSPGTAVA-PFPPRSAELEPEERVRTQEEEXXXXXXXYE---------------------------------------ERGVAGI-RLSSAVSSDGGFGESAEKDRP-----GGAAASA-EFVGWGGAGGAGWGPWSHVDMQLVVGQASKHRVLLIRFVRARTTACRDAVRVATAAAEIGEPLAIAPAAQNFVSGVRRALQERGMLMDSLEDFPTQEGRVMLDPHFLAQVEEMCQWDMVTSLREAGVSLDEHARVSE 277
            +++T L      AA +GLELVRKRGGQVLYGVAP  +                            APPSP  ++  P  PRS               XXXXXXX                                         E  V G     +A SS    G SA K        GGA   A E  GW GAGGAGWG WSHVDMQLVVGQASKHRVLL+RFV +RT   R+  R+A AAAE GEPLAIAPAA+ FVS V+RAL++RG L++SLE+ P Q+ +V +D  FL+QVE MCQ+DMV SLREAGVSLDEHAR  E
Sbjct:  496 QAVTILHVASLIAANHGLELVRKRGGQVLYGVAPPASN---------------------------APPSPHDSILFPHSPRSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPENEVEGAAERGTADSSAAAGGXSASKGAATGKLWGGAVGGATELRGWWGAGGAGWGAWSHVDMQLVVGQASKHRVLLVRFVTSRTATSREVFRLAAAAAENGEPLAIAPAAKGFVSSVQRALRDRGALLESLEELPVQKTKVEIDAQFLSQVEGMCQFDMVASLREAGVSLDEHARNEE 792
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96661.19122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI76_ECTSI1.360e-5045.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96661contigF-distichus_contig96661:519..1960 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96661.19122.1mRNA_F-distichus_contig96661.19122.1Fucus distichus monoicousmRNAF-distichus_contig96661 519..1960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig96661.19122.1 ID=prot_F-distichus_contig96661.19122.1|Name=mRNA_F-distichus_contig96661.19122.1|organism=Fucus distichus monoicous|type=polypeptide|length=277bp
RSLTPLSTTRQAAAENGLELVRKRGGQVLYGVAPETTESRYPRPNQHQPS
QRVGAWSVCRAKRGTAPPSPGTAVAPFPPRSAELEPEERVRTQEEEEEEY
EEEYEERGVAGIRLSSAVSSDGGFGESAEKDRPGGAAASAEFVGWGGAGG
AGWGPWSHVDMQLVVGQASKHRVLLIRFVRARTTACRDAVRVATAAAEIG
EPLAIAPAAQNFVSGVRRALQERGMLMDSLEDFPTQEGRVMLDPHFLAQV
EEMCQWDMVTSLREAGVSLDEHARVSE
back to top