prot_F-distichus_contig96521.19112.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig96521.19112.1
Unique Nameprot_F-distichus_contig96521.19112.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length65
Homology
BLAST of mRNA_F-distichus_contig96521.19112.1 vs. uniprot
Match: UPI001D017C4A (uncharacterized protein LOC123068095 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D017C4A)

HSP 1 Score: 54.3 bits (129), Expect = 6.210e-7
Identity = 23/63 (36.51%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    4 LSITAAKDWELRPLDVVMAYLEANVRKELYIELPKDYRESCDQEG--RLQKAMYGLAHTGLLW 64
            L++ A +DW++  +DV  A+L  N++KE+Y++ P  Y + C++E   +L+KA+YGL      W
Sbjct:  560 LALAAQEDWKVHRMDVKPAFLNGNLKKEVYVKQPLGYEKKCEEEKVYKLRKALYGLKQAPRAW 622          
BLAST of mRNA_F-distichus_contig96521.19112.1 vs. uniprot
Match: A0A060SVL2_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SVL2_PYCCI)

HSP 1 Score: 50.1 bits (118), Expect = 1.920e-5
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0
Query:    3 VLSITAAKDWELRPLDVVMAYLEANVRKELYIELPKDYRESCDQEGRLQKAMYGLAHTGLLW 64
            +L+I A +  EL   DVV AYL A++ KE+Y+  P  Y +   +  RLQKA+YGL   G  W
Sbjct:    7 ILAIAAERGMELCQFDVVGAYLNADLDKEIYMCQPPGYDDGSGRVLRLQKALYGLKQGGRKW 68          
BLAST of mRNA_F-distichus_contig96521.19112.1 vs. uniprot
Match: A0A438HTB3_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HTB3_VITVI)

HSP 1 Score: 50.1 bits (118), Expect = 1.920e-5
Identity = 24/63 (38.10%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    4 LSITAAKDWELRPLDVVMAYLEANVRKELYIELPKDYRESC--DQEGRLQKAMYGLAHTGLLW 64
            LS+   +DW L+ LD+  A+L  ++ KE+Y+E+P  + ES   +Q  +LQK++YGL  +   W
Sbjct:  100 LSLAVNQDWCLQQLDIKNAFLNGDLEKEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAW 162          
BLAST of mRNA_F-distichus_contig96521.19112.1 vs. uniprot
Match: A0A1Y1K7V8_PHOPY (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1K7V8_PHOPY)

HSP 1 Score: 49.7 bits (117), Expect = 2.410e-5
Identity = 22/61 (36.07%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    4 LSITAAKDWELRPLDVVMAYLEANVRKELYIELPKDYRESCDQEGRLQKAMYGLAHTGLLW 64
            L+ITAAK++++R  DV  A+L   ++ E ++++P+ Y +      +LQ+++YGL  + LLW
Sbjct:  171 LTITAAKEFKIRIFDVKTAFLHGELKDETFMQIPEGYPKKEGMICKLQRSLYGLKQSPLLW 231          
BLAST of mRNA_F-distichus_contig96521.19112.1 vs. uniprot
Match: A0A067Q6U0_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067Q6U0_9AGAM)

HSP 1 Score: 49.3 bits (116), Expect = 3.610e-5
Identity = 23/62 (37.10%), Postives = 37/62 (59.68%), Query Frame = 0
Query:    4 LSITAAKDWELRPLDVVMAYLEANVRKELYIELPKDY-RESCDQEGRLQKAMYGLAHTGLLW 64
            LS+   +DWE+  +D+  A+L  ++ KE+Y+ELP+ +   S  +  RL KA+YGL      W
Sbjct:  372 LSLATLEDWEIHGMDIKTAFLNGDLDKEIYMELPEGFGSHSPRRVARLNKALYGLKQASQQW 433          
BLAST of mRNA_F-distichus_contig96521.19112.1 vs. uniprot
Match: A0A7S1SHQ1_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S1SHQ1_9CHLO)

HSP 1 Score: 47.8 bits (112), Expect = 7.150e-5
Identity = 25/65 (38.46%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    4 LSITAAKDWELRPLDVVMAYLEANVRKELYIELPKDYRE-SCDQEGR---LQKAMYGLAHTGLLW 64
            L++ A  DWE+  LDVV A+LEA++ +E+Y+  P+ +R    + E R   L+K++YGL      W
Sbjct:   11 LALAAYNDWEVEQLDVVTAFLEADIEEEIYMRQPEGFRHFDINGEERVCLLKKSLYGLKQAPRNW 75          
BLAST of mRNA_F-distichus_contig96521.19112.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3)

HSP 1 Score: 48.1 bits (113), Expect = 9.440e-5
Identity = 22/61 (36.07%), Postives = 38/61 (62.30%), Query Frame = 0
Query:    4 LSITAAKDWELRPLDVVMAYLEANVRKELYIELPKDYRESCDQEGRLQKAMYGLAHTGLLW 64
            L+I A K+ E++ LDV  AYL  ++R+E+++  P  + +   +  RL+K +YGL  +G  W
Sbjct:  825 LAIAAIKNLEIQQLDVKGAYLNGDLREEIFMRQPDGFHDGTSKVCRLKKTLYGLKQSGREW 885          
BLAST of mRNA_F-distichus_contig96521.19112.1 vs. uniprot
Match: A0A8H6X4E8_9AGAR (Uncharacterized protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6X4E8_9AGAR)

HSP 1 Score: 48.1 bits (113), Expect = 9.460e-5
Identity = 21/63 (33.33%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    2 MVLSITAAKDWELRPLDVVMAYLEANVRKELYIELPKDYRESCDQEGRLQKAMYGLAHTGLLW 64
            ++L++ A  D E+  +DV  AYL   +R+E+Y++ P+ + +   +  RL K +YGL  +G +W
Sbjct:  924 LLLALAARYDLEMHTVDVKGAYLNGELREEIYMKQPEGFSDGTPRVWRLHKTIYGLEQSGRVW 986          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96521.19112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
UPI001D017C4A6.210e-736.51uncharacterized protein LOC123068095 n=1 Tax=Triti... [more]
A0A060SVL2_PYCCI1.920e-543.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438HTB3_VITVI1.920e-538.10Retrovirus-related Pol polyprotein from transposon... [more]
A0A1Y1K7V8_PHOPY2.410e-536.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A067Q6U0_9AGAM3.610e-537.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A7S1SHQ1_9CHLO7.150e-538.46Hypothetical protein (Fragment) n=2 Tax=Eukaryota ... [more]
A0A067T5Q4_GALM39.440e-536.07Integrase catalytic domain-containing protein (Fra... [more]
A0A8H6X4E8_9AGAR9.460e-533.33Uncharacterized protein n=1 Tax=Mycena venus TaxID... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..64
e-value: 2.0E-8
score: 34.2

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..64
e-value: 2.0E-8
score: 34.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96521contigF-distichus_contig96521:1893..2087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96521.19112.1mRNA_F-distichus_contig96521.19112.1Fucus distichus monoicousmRNAF-distichus_contig96521 1893..2183 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig96521.19112.1 ID=prot_F-distichus_contig96521.19112.1|Name=mRNA_F-distichus_contig96521.19112.1|organism=Fucus distichus monoicous|type=polypeptide|length=65bp
MMVLSITAAKDWELRPLDVVMAYLEANVRKELYIELPKDYRESCDQEGRL
QKAMYGLAHTGLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2