prot_F-distichus_contig9633.19087.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9633.19087.1
Unique Nameprot_F-distichus_contig9633.19087.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length125
Homology
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: D7FTS9_ECTSI (Endonuclease III homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS9_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 6.410e-68
Identity = 96/117 (82.05%), Postives = 105/117 (89.74%), Query Frame = 0 
Query:    9 GLLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSSARGGDLSEPPN 125
            GLL+LPGVGPKM YLVMDVAWGR EGICVDTHVHRISNRLGWVDTWNR++P++QNPEKTRKHLQ WLPREHWSEVN LLVGFGQQVC A RPSCS CGI  +CPS+ R GDL+ PP+
Sbjct:  172 GLLELPGVGPKMTYLVMDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATRPSCSACGISGLCPSADRHGDLALPPS 288
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: A0A7S2V6M2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6M2_9STRA)

HSP 1 Score: 171 bits (433), Expect = 7.420e-53
Identity = 73/105 (69.52%), Postives = 88/105 (83.81%), Query Frame = 0 
Query:   10 LLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSS 114
            LL LPGVGPKMA LVMD+AW +  GICVDTHVHR+SNRLGWV+TWN  KPRSQNPEKTRK L+ WLPR+ W ++N LLVG+GQ VC+A+ P+CS+C I+  CPS+
Sbjct:   11 LLALPGVGPKMAILVMDIAWDQTVGICVDTHVHRLSNRLGWVETWNHKKPRSQNPEKTRKALEKWLPRDSWGQINPLLVGYGQSVCKAINPACSSCCIQQQCPSA 115
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: A0A5D6Y8M4_9STRA (Endonuclease III homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8M4_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.570e-49
Identity = 73/108 (67.59%), Postives = 84/108 (77.78%), Query Frame = 0 
Query:    9 GLLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSSAR 116
            GLL LPGVGPKMAYLVMD AW  + GICVDTHVHRISNRLGWV TWN+  P++Q+PEKTR+ LQ WLPREHW  +N LLVGFGQ +C+   P C  C I  +CPS+ R
Sbjct:  214 GLLALPGVGPKMAYLVMDCAWSNVAGICVDTHVHRISNRLGWVTTWNKKNPKAQDPEKTRRELQDWLPREHWGPLNLLLVGFGQTICQPRAPKCDECSITHLCPSAHR 321
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: F0X2C6_9STRA (Endonuclease III homolog n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X2C6_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.500e-49
Identity = 70/107 (65.42%), Postives = 86/107 (80.37%), Query Frame = 0 
Query:   10 LLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSSAR 116
            L+ LPGVGPKMAYLVM+VAW +  GICVDTHVHRI NRLGWV TWN+  P++Q+PEKTRK L+AWLP EHW  +N LLVGFGQ +C A +P C  C ++ ICPS+++
Sbjct:  209 LVALPGVGPKMAYLVMNVAWNKPVGICVDTHVHRICNRLGWVSTWNKKNPKAQDPEKTRKELEAWLPSEHWDSINQLLVGFGQTICHARQPKCKDCALQSICPSASK 315
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: K3WGK0_GLOUD (ENDO3c domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGK0_GLOUD)

HSP 1 Score: 160 bits (405), Expect = 4.470e-48
Identity = 69/116 (59.48%), Postives = 90/116 (77.59%), Query Frame = 0 
Query:    1 ELNDNYSTGLLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSSAR 116
            ++ +NY   LL+LPGVGPK+A+LVM+ AW  + GICVDTHVHRISNRLGWVDTWN   P++Q P+KTR+ LQ WLP+EHW ++N LLVG GQ+VC +  P CS C +  +CPS+ +
Sbjct:   44 DIPNNYDD-LLELPGVGPKIAHLVMNCAWKNVVGICVDTHVHRISNRLGWVDTWNTKNPKAQGPQKTRQELQDWLPQEHWGQLNLLLVGLGQKVCFSRNPKCSECRLSHLCPSATK 158
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: H3G4Y0_PHYRM (Endonuclease III homolog n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G4Y0_PHYRM)

HSP 1 Score: 163 bits (412), Expect = 4.910e-48
Identity = 73/114 (64.04%), Postives = 85/114 (74.56%), Query Frame = 0 
Query:    1 ELNDNYSTGLLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSS 114
            E+ D Y  GL+ LPGVGPKMA LVM+ AW    GICVDTHVHRISNRL WV TWN++ P+SQNPEKTR  L+ WLP+EHW  +N LLVGFGQ +C    P CS C IR +CPS+
Sbjct:  134 EIPDTYE-GLIGLPGVGPKMATLVMNCAWNNAVGICVDTHVHRISNRLKWVKTWNKNNPKSQNPEKTRAELEDWLPKEHWGPINPLLVGFGQTICLPRGPKCSECKIRGVCPSA 246
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: K3WGH9_GLOUD (Endonuclease III homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGH9_GLOUD)

HSP 1 Score: 163 bits (413), Expect = 1.100e-47
Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:   10 LLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSS 114
            L+ LPGVGPKMAYLVMD AW  + GICVDTHVHRISNRLGWV+TWN+  P++Q+PEKTR  LQ WLP+EHW  +N LLVGFGQ +C+   P C+ C I  +CPS+
Sbjct:  179 LVALPGVGPKMAYLVMDCAWNNVVGICVDTHVHRISNRLGWVNTWNKKNPKAQDPEKTRAELQDWLPQEHWGPINVLLVGFGQTICQPRNPKCTECKISHLCPSA 283
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: A0A1V9YAA5_9STRA (Endonuclease III homolog n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAA5_9STRA)

HSP 1 Score: 161 bits (407), Expect = 3.120e-46
Identity = 66/107 (61.68%), Postives = 86/107 (80.37%), Query Frame = 0 
Query:   10 LLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSSAR 116
            L+ LPGVGPKMA+L M  AW +  GICVD HVHRISNRLGWV TWN++ P+SQ+PEKTRK L+ WLP + W+ VN +LVGFGQ++C  + P C+ CG+RD+CPS+++
Sbjct:  229 LVALPGVGPKMAHLTMSAAWEKTVGICVDVHVHRISNRLGWVKTWNKANPKSQDPEKTRKELEDWLPYDLWNPVNAMLVGFGQEICLPMNPRCADCGVRDLCPSASK 335
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: A0A329RX62_9STRA (Endonuclease III homolog n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RX62_9STRA)

HSP 1 Score: 158 bits (399), Expect = 2.950e-45
Identity = 70/106 (66.04%), Postives = 81/106 (76.42%), Query Frame = 0 
Query:    9 GLLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSS 114
            GL+ LPGVGPKMA LVM+ AW    GICVDTHVHRISNRL WV TWN++ P+SQ+PEKTR  L+ WLP+EHW  +N LLVGFGQ +C    P CS C IR ICPS+
Sbjct:  207 GLIALPGVGPKMATLVMNCAWKNTVGICVDTHVHRISNRLKWVKTWNKNNPKSQDPEKTRAELEDWLPKEHWGPINPLLVGFGQTICLPRGPKCSECKIRGICPSA 312
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BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Match: A0A1W0A8A4_9STRA (Endonuclease III homolog n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8A4_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.680e-45
Identity = 65/107 (60.75%), Postives = 83/107 (77.57%), Query Frame = 0 
Query:   10 LLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGWVDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRPSCSTCGIRDICPSSAR 116
            L+ LPGVGPKMA+L M  AW +  GICVD HVHRISNRLGWV TWN+  P+SQ+PEKTRK L+ WLP + W+ +N +LVGFGQ++C  V P CS C +R +CPS+++
Sbjct:  219 LIALPGVGPKMAHLTMSAAWEKTVGICVDVHVHRISNRLGWVKTWNKQNPKSQDPEKTRKELEDWLPYDRWNPINAMLVGFGQEICFPVNPRCSDCTVRHLCPSASK 325
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9633.19087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTS9_ECTSI6.410e-6882.05Endonuclease III homolog n=1 Tax=Ectocarpus silicu... [more]
A0A7S2V6M2_9STRA7.420e-5369.52Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A5D6Y8M4_9STRA1.570e-4967.59Endonuclease III homolog n=1 Tax=Pythium brassicum... [more]
F0X2C6_9STRA5.500e-4965.42Endonuclease III homolog n=1 Tax=Albugo laibachii ... [more]
K3WGK0_GLOUD4.470e-4859.48ENDO3c domain-containing protein n=1 Tax=Globispor... [more]
H3G4Y0_PHYRM4.910e-4864.04Endonuclease III homolog n=1 Tax=Phytophthora ramo... [more]
K3WGH9_GLOUD1.100e-4765.71Endonuclease III homolog n=1 Tax=Globisporangium u... [more]
A0A1V9YAA5_9STRA3.120e-4661.68Endonuclease III homolog n=1 Tax=Achlya hypogyna T... [more]
A0A329RX62_9STRA2.950e-4566.04Endonuclease III homolog n=2 Tax=Phytophthora TaxI... [more]
A0A1W0A8A4_9STRA3.680e-4560.75Endonuclease III homolog n=1 Tax=Thraustotheca cla... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003651Endonuclease III-like, iron-sulphur cluster loop motifSMARTSM00525ccc3coord: 94..114
e-value: 0.001
score: 28.3
IPR003265HhH-GPD domainSMARTSM00478endo3endcoord: 1..93
e-value: 3.1E-4
score: 16.7
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 19..117
e-value: 1.1E-31
score: 110.6
NoneNo IPR availablePANTHERPTHR43286:SF1ENDONUCLEASE III-LIKE PROTEIN 1coord: 8..117
NoneNo IPR availablePANTHERPTHR43286FAMILY NOT NAMEDcoord: 8..117
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 8..117

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003651Endonuclease III-like, iron-sulphur cluster loop motifSMARTSM00525ccc3coord: 94..114
e-value: 0.001
score: 28.3
IPR003265HhH-GPD domainSMARTSM00478endo3endcoord: 1..93
e-value: 3.1E-4
score: 16.7
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 19..117
e-value: 1.1E-31
score: 110.6
NoneNo IPR availablePANTHERPTHR43286:SF1ENDONUCLEASE III-LIKE PROTEIN 1coord: 8..117
NoneNo IPR availablePANTHERPTHR43286FAMILY NOT NAMEDcoord: 8..117
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 8..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9633contigF-distichus_contig9633:11..1202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9633.19087.1mRNA_F-distichus_contig9633.19087.1Fucus distichus monoicousmRNAF-distichus_contig9633 11..1202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9633.19087.1 ID=prot_F-distichus_contig9633.19087.1|Name=mRNA_F-distichus_contig9633.19087.1|organism=Fucus distichus monoicous|type=polypeptide|length=125bp
ELNDNYSTGLLDLPGVGPKMAYLVMDVAWGRIEGICVDTHVHRISNRLGW
VDTWNRSKPRSQNPEKTRKHLQAWLPREHWSEVNGLLVGFGQQVCRAVRP
SCSTCGIRDICPSSARGGDLSEPPN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003651Endonuclease3_FeS-loop_motif
IPR003265HhH-GPD_domain
IPR023170HTH_base_excis_C
IPR011257DNA_glycosylase