prot_F-distichus_contig95019.18958.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig95019.18958.1
Unique Nameprot_F-distichus_contig95019.18958.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length73
Homology
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: D7FML5_ECTSI (Putative: similar to cytoplasmic dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML5_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.370e-24
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVST 56
            +  QVV WDTRAKSLPVQRTPLSATGHTYPVYNLHIGGT N+PSLLTAST+GRVST
Sbjct:  423 YSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGRVST 478          
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: A0A1W0AAI2_9STRA (Cytoplasmic dynein intermediate chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAI2_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.010e-18
Identity = 39/72 (54.17%), Postives = 56/72 (77.78%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLR 72
            +  QVV WDTRAK+ PVQ+T LSA GHT+P+Y++ + GT +S +L++ASTDGR+  WN +QL+ P+ V+ LR
Sbjct:  329 YSGQVVLWDTRAKNTPVQKTTLSANGHTHPIYSMSVVGTKSSYNLVSASTDGRMCVWNINQLHSPVDVLDLR 400          
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: F4PS77_CAVFA (Cytoplasmic dynein intermediate chain n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PS77_CAVFA)

HSP 1 Score: 86.7 bits (213), Expect = 3.510e-18
Identity = 35/71 (49.30%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQL 71
            +  Q+V WDTR+KS PVQRTPLS+ GHT+PVY++ + G+ N+ +L++ STDG++ +WN   L+QP++ + L
Sbjct:  341 YSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMSVVGSTNANTLISVSTDGKLCSWNLDNLSQPVETLDL 411          
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: UPI0006449257 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449257)

HSP 1 Score: 86.7 bits (213), Expect = 3.510e-18
Identity = 36/71 (50.70%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQL 71
            +  Q+V WDTR+KS PVQRTPLS+ GHT+PVY++ + G+AN+ SL++ STDG++ +W+   L+QP++ + L
Sbjct:  344 YSGQIVVWDTRSKSTPVQRTPLSSIGHTHPVYSMSVVGSANANSLVSISTDGKLCSWSLENLSQPIETLDL 414          
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: D3AZM5_POLPP (Cytoplasmic dynein intermediate chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZM5_POLPP)

HSP 1 Score: 86.7 bits (213), Expect = 3.510e-18
Identity = 36/71 (50.70%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQL 71
            +  Q+V WDTR+KS PVQRTPLS+ GHT+PVY++ + G+AN+ SL++ STDG++ +W+   L+QP++ + L
Sbjct:  345 YSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMAVVGSANANSLVSISTDGKLCSWSLDNLSQPIETLDL 415          
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: A0A151Z6W6_9MYCE (Cytoplasmic dynein intermediate chain n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6W6_9MYCE)

HSP 1 Score: 86.7 bits (213), Expect = 3.520e-18
Identity = 37/71 (52.11%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQL 71
            +  Q+V WDTRAKS PVQRTPLS+ GHT+PVY++ + G+ N+ SL+  STDG++ +WN   L+QP + ++L
Sbjct:  353 YSGQIVVWDTRAKSTPVQRTPLSSIGHTHPVYSMSVIGSTNANSLVAISTDGKLCSWNLENLSQPTETIEL 423          
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: K3X7T4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7T4_GLOUD)

HSP 1 Score: 86.7 bits (213), Expect = 3.520e-18
Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLR 72
            +  Q+V WDTRAKS PVQ+T LS+  HT+P+Y++ + GT +S +L++ASTDGRV  WN  QL QP+ ++ LR
Sbjct:  353 YSGQIVIWDTRAKSAPVQKTSLSSCSHTHPIYSMSVVGTKSSYNLISASTDGRVCIWNIDQLQQPIDMLDLR 424          
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: A0A8J4Q098_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q098_9MYCE)

HSP 1 Score: 85.9 bits (211), Expect = 6.560e-18
Identity = 37/71 (52.11%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQL 71
            +  Q+V WDTRAKS PVQRTPLS+ GHT+PVY++ + G+AN+ SL++ STD ++ +WN   L QP++ ++L
Sbjct:  357 YSGQIVIWDTRAKSTPVQRTPLSSVGHTHPVYSMAVVGSANANSLVSISTDAKLCSWNLENLLQPIETIEL 427          
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: A0A1E3ILX7_9TREE (Dynein intermediate chain, cytosolic n=2 Tax=Cryptococcus depauperatus TaxID=5208 RepID=A0A1E3ILX7_9TREE)

HSP 1 Score: 85.9 bits (211), Expect = 6.580e-18
Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQL 71
            +  QV+ WDTRAK LPV +TPLSATGHTYP+Y++ + GT N+ SL+T+STDG V +W    L QP +V+ L
Sbjct:  387 YSGQVLLWDTRAKHLPVLKTPLSATGHTYPIYSMKMIGTQNANSLITSSTDGLVCSWLVDMLAQPQEVLPL 457          
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Match: A0A7S4MB13_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MB13_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 7.870e-18
Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTASTDGRVSTWNPSQLNQPLQVMQLR 72
            +  Q+V WDTRAKS PVQR+PLS+TGHT+PVY L + GT N+ +L++ STDG +  W  S L+QP++ + L+
Sbjct:   26 YSGQLVLWDTRAKSTPVQRSPLSSTGHTHPVYCLDVVGTQNAHNLVSVSTDGTLCAWTLSNLSQPIEQIHLQ 97          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig95019.18958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FML5_ECTSI5.370e-2487.50Putative: similar to cytoplasmic dynein intermedia... [more]
A0A1W0AAI2_9STRA1.010e-1854.17Cytoplasmic dynein intermediate chain n=1 Tax=Thra... [more]
F4PS77_CAVFA3.510e-1849.30Cytoplasmic dynein intermediate chain n=1 Tax=Cave... [more]
UPI00064492573.510e-1850.70hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3AZM5_POLPP3.510e-1850.70Cytoplasmic dynein intermediate chain n=1 Tax=Poly... [more]
A0A151Z6W6_9MYCE3.520e-1852.11Cytoplasmic dynein intermediate chain n=1 Tax=Tieg... [more]
K3X7T4_GLOUD3.520e-1852.78Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8J4Q098_9MYCE6.560e-1852.11Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A1E3ILX7_9TREE6.580e-1856.34Dynein intermediate chain, cytosolic n=2 Tax=Crypt... [more]
A0A7S4MB13_9EUKA7.870e-1852.78Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..72
e-value: 1.2E-6
score: 30.2
NoneNo IPR availablePANTHERPTHR12442:SF22CYTOPLASMIC DYNEIN 1 INTERMEDIATE CHAIN-RELATEDcoord: 4..71
NoneNo IPR availablePANTHERPTHR12442DYNEIN INTERMEDIATE CHAINcoord: 4..71
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..70

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..72
e-value: 1.2E-6
score: 30.2
NoneNo IPR availablePANTHERPTHR12442:SF22CYTOPLASMIC DYNEIN 1 INTERMEDIATE CHAIN-RELATEDcoord: 4..71
NoneNo IPR availablePANTHERPTHR12442DYNEIN INTERMEDIATE CHAINcoord: 4..71
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig95019contigF-distichus_contig95019:1113..1669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig95019.18958.1mRNA_F-distichus_contig95019.18958.1Fucus distichus monoicousmRNAF-distichus_contig95019 1113..1669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig95019.18958.1 ID=prot_F-distichus_contig95019.18958.1|Name=mRNA_F-distichus_contig95019.18958.1|organism=Fucus distichus monoicous|type=polypeptide|length=73bp
FCSQVVEWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTANSPSLLTAST
DGRVSTWNPSQLNQPLQVMQLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf