prot_F-distichus_contig10701.596.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10701.596.1
Unique Nameprot_F-distichus_contig10701.596.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length324
Homology
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BLAST of mRNA_F-distichus_contig10701.596.1 vs. uniprot
Match: D8LDJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ8_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 4.410e-74
Identity = 153/347 (44.09%), Postives = 190/347 (54.76%), Query Frame = 0 
Query:    2 IRKLSSDDKAKLKTNSIENDSVGWIRKSLFKKAMEWPRELYLNVLGCKALLPPARGSGRKTLTETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDQSTEQVPEEESDGVE-------LRVRSE---ESGGSYDSSLDSADGAGGLEE---------GNGDAGGM-----ECFVLVRNATTGRDLKTQGIRGGANPVFRESLVVPCQGPRDAIVLGVYYKMAGDHPALLGETALPLDTRVIGASHPVVLSVKDANGHNRGFLRVETFWMDEAKPRKERGEFYYRVVHRSGVRLRNHPSMSAEKALHVMEYGEVFLASERQW 324
            +R++S DDKAKLK  SIENDS GW++K LFKK + WPRELYLNVLGCKAL+P +       LT TA                                                         + +                  L   SE   ESG    SS+   DGA  +E+          N + G +     ECFV +RNATTGRDL+T+ + GGAN  F E+ VVPCQGPRDA+VL V++   G+    +G+ ALPLD RV+G SHPV+LSVKD  G NRGFLRVETFW+DEAKPRKE GEFYY+VVH  GV LRN P   +++++HV+  GEVF+A ERQW
Sbjct:    2 VRRISMDDKAKLKAFSIENDSAGWLKKKLFKKEVTWPRELYLNVLGCKALVPQSAVGEGGPLTATASVTTDGENGDAAGTAAAGVILAGVGGDIDARVNPERATPPPGGALGAAGGVVVATPGTADGTVXXXXXXXXXXXXXXGLDTESEGGIESGDEATSSV--GDGAEPVEDVNELMSALSSNMEGGEVKEVKGECFVRIRNATTGRDLQTETVSGGANIGFHETFVVPCQGPRDAVVLEVFFG-EGEKAVAIGDAALPLDARVVGVSHPVLLSVKDKQGRNRGFLRVETFWLDEAKPRKEVGEFYYKVVHPCGVHLRNQPCTGSDRSVHVLGCGEVFVACERQW 345
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BLAST of mRNA_F-distichus_contig10701.596.1 vs. uniprot
Match: A0A6H5LA98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA98_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 6.630e-64
Identity = 146/356 (41.01%), Postives = 179/356 (50.28%), Query Frame = 0 
Query:    8 DDKAKLKTNSIENDSVGWIRKSLFKKAMEWPRELYLNVLGCKALLPPARGSGRKTLTETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDQSTEQVPEEESDGVELRVRSEESGGSYDSSLDSA----DGAGGLEEGN-------GDAGGME-------CFVLVRNATTGRDL-----KTQGIRGGANPVFRESLVVPCQGPRDAIVLGVYYKMAGDHPALLGETA----------------LPLDTRVIGASHPVVLSVKDANGHNRGFLRVETFWMDEAKPRKERGEFYYRVVHRSGVRLRNHPSMSAEKALHVMEYGEVFLASERQW 324
            DDKAKLK  SIENDS GW++K LFKK + WPRELYLNVLGCKAL+P +       LT TA                                                       D +  +                +S G  +S  ++     DGA  +E+ N        +  G E       CFV VRNATTGRDL     KT+ + GGAN  F E+ VVPCQGPRDA+VL V++   G+    +G                      D RV+G SHPV+LSVKD  G NRGFLRVETFW+DEAKPRKE GEFYY+VVH  GV LRN P   +++++HV+E GEVF+A ERQW
Sbjct:    2 DDKAKLKAFSIENDSAGWLKKKLFKKEVTWPRELYLNVLGCKALVPQSAVGEDGPLTATASVTTDGENGDVAGTAAGAGVVLSGVGGDMDAKANPEPATPPPAGEVVVASPGT-ADGTVNRXXXXXXXXXXXXXXDTDSEGGMESGDEATSTLGDGAEPVEDVNELMSAVSSNVEGAEVKDVKGVCFVRVRNATTGRDLQRHVLKTETVSGGANIEFHETFVVPCQGPRDAVVLEVFFG-EGEKAVAIGMRGQSSNDYGMHDXXXXXXXXXDARVVGVSHPVLLSVKDKQGRNRGFLRVETFWLDEAKPRKEVGEFYYKVVHPCGVHLRNQPCTGSDRSVHVLECGEVFVACERQW 355
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10701.596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDJ8_ECTSI4.410e-7444.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LA98_9PHAE6.630e-6441.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 159..287
e-value: 3.9E-6
score: 28.8
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 172..274

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 159..287
e-value: 3.9E-6
score: 28.8
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 172..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10701contigF-distichus_contig10701:358..3847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10701.596.1mRNA_F-distichus_contig10701.596.1Fucus distichus monoicousmRNAF-distichus_contig10701 358..3847 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10701.596.1 ID=prot_F-distichus_contig10701.596.1|Name=mRNA_F-distichus_contig10701.596.1|organism=Fucus distichus monoicous|type=polypeptide|length=324bp
QIRKLSSDDKAKLKTNSIENDSVGWIRKSLFKKAMEWPRELYLNVLGCKA
LLPPARGSGRKTLTETATASVTTDEGDNGSGGACTAPPYPPAAAAAAPGE
SSGIGADADVGADSDAAAAVAVDQSTEQVPEEESDGVELRVRSEESGGSY
DSSLDSADGAGGLEEGNGDAGGMECFVLVRNATTGRDLKTQGIRGGANPV
FRESLVVPCQGPRDAIVLGVYYKMAGDHPALLGETALPLDTRVIGASHPV
VLSVKDANGHNRGFLRVETFWMDEAKPRKERGEFYYRVVHRSGVRLRNHP
SMSAEKALHVMEYGEVFLASERQW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf