prot_F-distichus_contig106648.567.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig106648.567.1
Unique Nameprot_F-distichus_contig106648.567.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length141
Homology
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: D8LIJ4_ECTSI (Pyruvate dehydrogenase E1 component subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ4_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 7.400e-80
Identity = 121/141 (85.82%), Postives = 133/141 (94.33%), Query Frame = 0
Query:    1 ASAWRRSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGVGEE 141
            A+ WR+ AKRSMGT+E  VREAIN G+DEEM RDERVFL+GEEVAQYQGAYKVTKGLYQKYGEQRV+DTPITEMGF GLATGAAYKDLRPVVEFMTFNFSLQAIDQ++NSAAKQLYMSAGDCPVP+VFRGPNG+A+GVG +
Sbjct:   19 AAGWRQPAKRSMGTIEVAVREAINQGLDEEMGRDERVFLMGEEVAQYQGAYKVTKGLYQKYGEQRVIDTPITEMGFTGLATGAAYKDLRPVVEFMTFNFSLQAIDQILNSAAKQLYMSAGDCPVPVVFRGPNGAASGVGAQ 159          
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A835YH27_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH27_9STRA)

HSP 1 Score: 228 bits (582), Expect = 4.750e-72
Identity = 113/137 (82.48%), Postives = 125/137 (91.24%), Query Frame = 0
Query:    2 SAWRRSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 138
            +A  R+ +R M T++ PVREAIN G+DEEM R+E VFLLGEEVAQYQGAYKVTKGLYQKYGE+RV+DTPITEMGF GLA GAAYKDLRPVVEFMTFNFS+QAIDQV+NSAAKQLYM+AGD PVPIVFRGPNGSAAGV
Sbjct:   16 AAQARTVQRGMATIDMPVREAINQGLDEEMERNENVFLLGEEVAQYQGAYKVTKGLYQKYGEKRVLDTPITEMGFTGLAVGAAYKDLRPVVEFMTFNFSMQAIDQVINSAAKQLYMTAGDIPVPIVFRGPNGSAAGV 152          
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A7S2ME39_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME39_9STRA)

HSP 1 Score: 218 bits (555), Expect = 9.050e-68
Identity = 107/133 (80.45%), Postives = 121/133 (90.98%), Query Frame = 0
Query:    6 RSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 138
            R A R M T+E P+REA+N  +DEEM+RD+ VF++GEEVAQYQGAYKVTKGLYQKYG++RV+DTPITEMGF GLA GAAYKDLRPVVEFMTFNFS+QAIDQV+NSAAKQLYMSAG  PVPIVFRGPNG+AAGV
Sbjct:   35 RIATRGMATVEVPLREALNTALDEEMARDDAVFIMGEEVAQYQGAYKVTKGLYQKYGDRRVIDTPITEMGFTGLACGAAYKDLRPVVEFMTFNFSMQAIDQVINSAAKQLYMSAGTIPVPIVFRGPNGAAAGV 167          
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A7S3V3V1_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V3V1_9STRA)

HSP 1 Score: 211 bits (536), Expect = 4.490e-65
Identity = 104/133 (78.20%), Postives = 117/133 (87.97%), Query Frame = 0
Query:    6 RSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 138
            +S  RSM T+   VREAIN GIDEEM RDE VF+LGEEVAQYQGAYK+TKGLYQKYG++RV+DTPITEMGFAGLA GA+YK+LRP+VEFMT NFS+QAIDQV+NSAAKQ YMSAGD   PIVFRGPNG+AAG 
Sbjct:   20 KSNARSMATINMTVREAINQGIDEEMERDESVFILGEEVAQYQGAYKITKGLYQKYGDKRVIDTPITEMGFAGLAIGASYKNLRPIVEFMTMNFSMQAIDQVINSAAKQYYMSAGDIACPIVFRGPNGNAAGT 152          
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A7S2XVY3_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVY3_9STRA)

HSP 1 Score: 210 bits (535), Expect = 6.700e-65
Identity = 101/129 (78.29%), Postives = 116/129 (89.92%), Query Frame = 0
Query:   10 RSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 138
            R+M T+E  VREA+N  IDEEM+RDE+VF++GEEVA YQGAYKVTKGLYQKYG++RV+DTPITEMGF GLA GA YKDLRP++EFMTFNFS+QAIDQ++NSAAKQ YMSAGD P PIVFRGPNG AAGV
Sbjct:   28 RTMATIEMSVREALNQAIDEEMARDEKVFVMGEEVAMYQGAYKVTKGLYQKYGDKRVIDTPITEMGFTGLAIGACYKDLRPILEFMTFNFSMQAIDQIINSAAKQNYMSAGDIPCPIVFRGPNGPAAGV 156          
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: X0XJJ7_9ZZZZ (Pyruvate dehydrogenase (acetyl-transferring) (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0XJJ7_9ZZZZ)

HSP 1 Score: 206 bits (523), Expect = 7.400e-65
Identity = 101/127 (79.53%), Postives = 113/127 (88.98%), Query Frame = 0
Query:   12 MGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 138
            M T++  VREAIN GIDEEM RDE VF+LGEEVAQYQGAYKVTKGLYQKYG++RV+DTPITE GFAGLA GAAYKDL+P+VEFMT NFS+QAIDQV+NSAAKQ YMSAG+   PIVFRGPNG+AAG 
Sbjct:    1 MATIDMTVREAINQGIDEEMERDEAVFILGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEAGFAGLAIGAAYKDLKPIVEFMTMNFSMQAIDQVINSAAKQYYMSAGNIACPIVFRGPNGNAAGT 127          
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: K0TIQ5_THAOC (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIQ5_THAOC)

HSP 1 Score: 206 bits (524), Expect = 1.550e-64
Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 0
Query:    8 AKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 138
            +KRSM T++  VR+AIN  IDEEM RDE+V++LGEEVAQY GAYKVTKGLYQKYG +RV+DTPITEMGF G+A G+AYKDLRP+VEFMT+NFS+QAIDQV+NSAAKQ YMSAGD   PIVFRGPNG+AAG 
Sbjct:   48 SKRSMATVDMTVRDAINSAIDEEMDRDEKVYVLGEEVAQYDGAYKVTKGLYQKYGAKRVIDTPITEMGFTGMAIGSAYKDLRPIVEFMTWNFSMQAIDQVINSAAKQYYMSAGDIACPIVFRGPNGNAAGT 178          
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A7S0A1U5_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A1U5_9STRA)

HSP 1 Score: 208 bits (529), Expect = 4.950e-64
Identity = 104/134 (77.61%), Postives = 117/134 (87.31%), Query Frame = 0
Query:    5 RRSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 138
            R S  R M T++ PVR+AIN  IDEEM  DE+VF+LGEEVAQYQGAYKVTKGLYQKYG++RV+DTPITEMGF GLA GA+ KDLRP+VEFMTFNFS+QAIDQVVNSAAKQ YMSAG+   PIVFRGPNG+AAGV
Sbjct:   18 RSSTTRGMATIQVPVRDAINMAIDEEMEADEKVFILGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFTGLAIGASLKDLRPIVEFMTFNFSMQAIDQVVNSAAKQYYMSAGNLTCPIVFRGPNGNAAGV 151          
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A6S9FNS6_HETAK (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FNS6_HETAK)

HSP 1 Score: 205 bits (522), Expect = 2.730e-63
Identity = 102/130 (78.46%), Postives = 112/130 (86.15%), Query Frame = 0
Query:   12 MGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGVGEE 141
            M T+E  VREAIN GIDEEM RDE VF +GEEVA YQGAYKVTKGLYQKYGE+RV+DTPITEMGF GLA GAAY DL+PV+EFMTFNFS+QAID VVNSAAKQ YM+ GD   PIVFRGPNG+AAGVG +
Sbjct:    1 MATIEMAVREAINQGIDEEMERDESVFCMGEEVAMYQGAYKVTKGLYQKYGEKRVVDTPITEMGFTGLAIGAAYADLKPVLEFMTFNFSMQAIDHVVNSAAKQFYMTNGDIACPIVFRGPNGAAAGVGAQ 130          
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: B8LC08_THAPS (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC08_THAPS)

HSP 1 Score: 204 bits (520), Expect = 5.790e-63
Identity = 101/127 (79.53%), Postives = 112/127 (88.19%), Query Frame = 0
Query:   12 MGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 138
            M T E  VR+AIN  IDEEM RDE+VF+LGEEVAQYQGAYKVTKGL+QKYG +RV+DTPITEMGF G+A GAAYKDLRPVVEFMT+NFS+QAIDQ+VNSAAKQ YMSAGD   PIVFRGPNG+AAG 
Sbjct:    1 MATTEVTVRDAINQAIDEEMERDEKVFILGEEVAQYQGAYKVTKGLFQKYGSKRVIDTPITEMGFTGMAIGAAYKDLRPVVEFMTWNFSMQAIDQIVNSAAKQYYMSAGDIACPIVFRGPNGNAAGT 127          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIJ4_ECTSI7.400e-8085.82Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A835YH27_9STRA4.750e-7282.48Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S2ME39_9STRA9.050e-6880.45Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S3V3V1_9STRA4.490e-6578.20Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S2XVY3_9STRA6.700e-6578.29Pyruvate dehydrogenase E1 component subunit beta n... [more]
X0XJJ7_9ZZZZ7.400e-6579.53Pyruvate dehydrogenase (acetyl-transferring) (Frag... [more]
K0TIQ5_THAOC1.550e-6476.34Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S0A1U5_9STRA4.950e-6477.61Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A6S9FNS6_HETAK2.730e-6378.46Pyruvate dehydrogenase E1 component subunit beta n... [more]
B8LC08_THAPS5.790e-6379.53Pyruvate dehydrogenase E1 component subunit beta n... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainSMARTSM00861Transket_pyr_3coord: 17..140
e-value: 2.5E-5
score: 33.7
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 19..135
e-value: 3.6E-26
score: 91.9
NoneNo IPR availableGENE3D3.40.50.970coord: 18..141
e-value: 3.3E-52
score: 178.3
NoneNo IPR availablePANTHERPTHR11624:SF56PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA, MITOCHONDRIALcoord: 9..139
IPR027110Pyruvate dehydrogenase E1 component subunit betaPANTHERPTHR11624DEHYDROGENASE RELATEDcoord: 9..139
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 18..140

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainSMARTSM00861Transket_pyr_3coord: 17..140
e-value: 2.5E-5
score: 33.7
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 19..135
e-value: 3.6E-26
score: 91.9
NoneNo IPR availableGENE3D3.40.50.970coord: 18..141
e-value: 3.3E-52
score: 178.3
NoneNo IPR availablePANTHERPTHR11624:SF56PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA, MITOCHONDRIALcoord: 9..139
IPR027110Pyruvate dehydrogenase E1 component subunit betaPANTHERPTHR11624DEHYDROGENASE RELATEDcoord: 9..139
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 18..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig106648contigF-distichus_contig106648:458..1926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig106648.567.1mRNA_F-distichus_contig106648.567.1Fucus distichus monoicousmRNAF-distichus_contig106648 458..1926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig106648.567.1 ID=prot_F-distichus_contig106648.567.1|Name=mRNA_F-distichus_contig106648.567.1|organism=Fucus distichus monoicous|type=polypeptide|length=141bp
ASAWRRSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGA
YKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFS
LQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGVGEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR027110PDHB
IPR029061THDP-binding