mRNA_F-distichus_contig106648.567.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: D8LIJ4_ECTSI (Pyruvate dehydrogenase E1 component subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ4_ECTSI) HSP 1 Score: 248 bits (634), Expect = 7.400e-80 Identity = 121/141 (85.82%), Postives = 133/141 (94.33%), Query Frame = 1
Query: 1 ASAWRRSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGVGEE 423
A+ WR+ AKRSMGT+E VREAIN G+DEEM RDERVFL+GEEVAQYQGAYKVTKGLYQKYGEQRV+DTPITEMGF GLATGAAYKDLRPVVEFMTFNFSLQAIDQ++NSAAKQLYMSAGDCPVP+VFRGPNG+A+GVG +
Sbjct: 19 AAGWRQPAKRSMGTIEVAVREAINQGLDEEMGRDERVFLMGEEVAQYQGAYKVTKGLYQKYGEQRVIDTPITEMGFTGLATGAAYKDLRPVVEFMTFNFSLQAIDQILNSAAKQLYMSAGDCPVPVVFRGPNGAASGVGAQ 159
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A835YH27_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH27_9STRA) HSP 1 Score: 228 bits (582), Expect = 4.750e-72 Identity = 113/137 (82.48%), Postives = 125/137 (91.24%), Query Frame = 1
Query: 4 SAWRRSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 414
+A R+ +R M T++ PVREAIN G+DEEM R+E VFLLGEEVAQYQGAYKVTKGLYQKYGE+RV+DTPITEMGF GLA GAAYKDLRPVVEFMTFNFS+QAIDQV+NSAAKQLYM+AGD PVPIVFRGPNGSAAGV
Sbjct: 16 AAQARTVQRGMATIDMPVREAINQGLDEEMERNENVFLLGEEVAQYQGAYKVTKGLYQKYGEKRVLDTPITEMGFTGLAVGAAYKDLRPVVEFMTFNFSMQAIDQVINSAAKQLYMTAGDIPVPIVFRGPNGSAAGV 152
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A7S2ME39_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME39_9STRA) HSP 1 Score: 218 bits (555), Expect = 9.050e-68 Identity = 107/133 (80.45%), Postives = 121/133 (90.98%), Query Frame = 1
Query: 16 RSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 414
R A R M T+E P+REA+N +DEEM+RD+ VF++GEEVAQYQGAYKVTKGLYQKYG++RV+DTPITEMGF GLA GAAYKDLRPVVEFMTFNFS+QAIDQV+NSAAKQLYMSAG PVPIVFRGPNG+AAGV
Sbjct: 35 RIATRGMATVEVPLREALNTALDEEMARDDAVFIMGEEVAQYQGAYKVTKGLYQKYGDRRVIDTPITEMGFTGLACGAAYKDLRPVVEFMTFNFSMQAIDQVINSAAKQLYMSAGTIPVPIVFRGPNGAAAGV 167
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A7S3V3V1_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V3V1_9STRA) HSP 1 Score: 211 bits (536), Expect = 4.490e-65 Identity = 104/133 (78.20%), Postives = 117/133 (87.97%), Query Frame = 1
Query: 16 RSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 414
+S RSM T+ VREAIN GIDEEM RDE VF+LGEEVAQYQGAYK+TKGLYQKYG++RV+DTPITEMGFAGLA GA+YK+LRP+VEFMT NFS+QAIDQV+NSAAKQ YMSAGD PIVFRGPNG+AAG
Sbjct: 20 KSNARSMATINMTVREAINQGIDEEMERDESVFILGEEVAQYQGAYKITKGLYQKYGDKRVIDTPITEMGFAGLAIGASYKNLRPIVEFMTMNFSMQAIDQVINSAAKQYYMSAGDIACPIVFRGPNGNAAGT 152
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A7S2XVY3_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVY3_9STRA) HSP 1 Score: 210 bits (535), Expect = 6.700e-65 Identity = 101/129 (78.29%), Postives = 116/129 (89.92%), Query Frame = 1
Query: 28 RSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 414
R+M T+E VREA+N IDEEM+RDE+VF++GEEVA YQGAYKVTKGLYQKYG++RV+DTPITEMGF GLA GA YKDLRP++EFMTFNFS+QAIDQ++NSAAKQ YMSAGD P PIVFRGPNG AAGV
Sbjct: 28 RTMATIEMSVREALNQAIDEEMARDEKVFVMGEEVAMYQGAYKVTKGLYQKYGDKRVIDTPITEMGFTGLAIGACYKDLRPILEFMTFNFSMQAIDQIINSAAKQNYMSAGDIPCPIVFRGPNGPAAGV 156
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: X0XJJ7_9ZZZZ (Pyruvate dehydrogenase (acetyl-transferring) (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0XJJ7_9ZZZZ) HSP 1 Score: 206 bits (523), Expect = 7.400e-65 Identity = 101/127 (79.53%), Postives = 113/127 (88.98%), Query Frame = 1
Query: 34 MGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 414
M T++ VREAIN GIDEEM RDE VF+LGEEVAQYQGAYKVTKGLYQKYG++RV+DTPITE GFAGLA GAAYKDL+P+VEFMT NFS+QAIDQV+NSAAKQ YMSAG+ PIVFRGPNG+AAG
Sbjct: 1 MATIDMTVREAINQGIDEEMERDEAVFILGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEAGFAGLAIGAAYKDLKPIVEFMTMNFSMQAIDQVINSAAKQYYMSAGNIACPIVFRGPNGNAAGT 127
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: K0TIQ5_THAOC (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIQ5_THAOC) HSP 1 Score: 206 bits (524), Expect = 1.550e-64 Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 1
Query: 22 AKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 414
+KRSM T++ VR+AIN IDEEM RDE+V++LGEEVAQY GAYKVTKGLYQKYG +RV+DTPITEMGF G+A G+AYKDLRP+VEFMT+NFS+QAIDQV+NSAAKQ YMSAGD PIVFRGPNG+AAG
Sbjct: 48 SKRSMATVDMTVRDAINSAIDEEMDRDEKVYVLGEEVAQYDGAYKVTKGLYQKYGAKRVIDTPITEMGFTGMAIGSAYKDLRPIVEFMTWNFSMQAIDQVINSAAKQYYMSAGDIACPIVFRGPNGNAAGT 178
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A7S0A1U5_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A1U5_9STRA) HSP 1 Score: 208 bits (529), Expect = 4.950e-64 Identity = 104/134 (77.61%), Postives = 117/134 (87.31%), Query Frame = 1
Query: 13 RRSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 414
R S R M T++ PVR+AIN IDEEM DE+VF+LGEEVAQYQGAYKVTKGLYQKYG++RV+DTPITEMGF GLA GA+ KDLRP+VEFMTFNFS+QAIDQVVNSAAKQ YMSAG+ PIVFRGPNG+AAGV
Sbjct: 18 RSSTTRGMATIQVPVRDAINMAIDEEMEADEKVFILGEEVAQYQGAYKVTKGLYQKYGDKRVIDTPITEMGFTGLAIGASLKDLRPIVEFMTFNFSMQAIDQVVNSAAKQYYMSAGNLTCPIVFRGPNGNAAGV 151
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: A0A6S9FNS6_HETAK (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FNS6_HETAK) HSP 1 Score: 205 bits (522), Expect = 2.730e-63 Identity = 102/130 (78.46%), Postives = 112/130 (86.15%), Query Frame = 1
Query: 34 MGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGVGEE 423
M T+E VREAIN GIDEEM RDE VF +GEEVA YQGAYKVTKGLYQKYGE+RV+DTPITEMGF GLA GAAY DL+PV+EFMTFNFS+QAID VVNSAAKQ YM+ GD PIVFRGPNG+AAGVG +
Sbjct: 1 MATIEMAVREAINQGIDEEMERDESVFCMGEEVAMYQGAYKVTKGLYQKYGEKRVVDTPITEMGFTGLAIGAAYADLKPVLEFMTFNFSMQAIDHVVNSAAKQFYMTNGDIACPIVFRGPNGAAAGVGAQ 130
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Match: B8LC08_THAPS (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC08_THAPS) HSP 1 Score: 204 bits (520), Expect = 5.790e-63 Identity = 101/127 (79.53%), Postives = 112/127 (88.19%), Query Frame = 1
Query: 34 MGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAYKVTKGLYQKYGEQRVMDTPITEMGFAGLATGAAYKDLRPVVEFMTFNFSLQAIDQVVNSAAKQLYMSAGDCPVPIVFRGPNGSAAGV 414
M T E VR+AIN IDEEM RDE+VF+LGEEVAQYQGAYKVTKGL+QKYG +RV+DTPITEMGF G+A GAAYKDLRPVVEFMT+NFS+QAIDQ+VNSAAKQ YMSAGD PIVFRGPNG+AAG
Sbjct: 1 MATTEVTVRDAINQAIDEEMERDEKVFILGEEVAQYQGAYKVTKGLFQKYGSKRVIDTPITEMGFTGMAIGAAYKDLRPVVEFMTWNFSMQAIDQIVNSAAKQYYMSAGDIACPIVFRGPNGNAAGT 127 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106648.567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106648.567.1 >prot_F-distichus_contig106648.567.1 ID=prot_F-distichus_contig106648.567.1|Name=mRNA_F-distichus_contig106648.567.1|organism=Fucus distichus monoicous|type=polypeptide|length=141bp ASAWRRSAKRSMGTLEKPVREAINDGIDEEMSRDERVFLLGEEVAQYQGAback to top mRNA from alignment at F-distichus_contig106648:458..1926+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106648.567.1 ID=mRNA_F-distichus_contig106648.567.1|Name=mRNA_F-distichus_contig106648.567.1|organism=Fucus distichus monoicous|type=mRNA|length=1469bp|location=Sequence derived from alignment at F-distichus_contig106648:458..1926+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106648:458..1926+ >mRNA_F-distichus_contig106648.567.1 ID=mRNA_F-distichus_contig106648.567.1|Name=mRNA_F-distichus_contig106648.567.1|organism=Fucus distichus monoicous|type=CDS|length=846bp|location=Sequence derived from alignment at F-distichus_contig106648:458..1926+ (Fucus distichus monoicous)back to top |