prot_F-distichus_contig106020.514.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig106020.514.1
Unique Nameprot_F-distichus_contig106020.514.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length120
Homology
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: D7G064_ECTSI (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G064_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 6.750e-40
Identity = 87/134 (64.93%), Postives = 96/134 (71.64%), Query Frame = 0
Query:    2 LQRAAISISAGVHNHPAASP--SXXXXXXXXXXARVVGGAI-------------GGEGSLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDEIQ 120
            L++AA+SISAGV    A SP  S            + GG++              GEG LDAQLFLIKHLLTLREQLTPFHIQFV AE KLNFGSTRMALRKFIRHTP+LFRLS KNAL+ELTVDSIPTIDE+Q
Sbjct:  700 LKKAAVSISAGVTAGSAPSPPVSSGGGGRGAPGGALAGGSVVPRXXXXXXXXXGSGEGGLDAQLFLIKHLLTLREQLTPFHIQFVHAEQKLNFGSTRMALRKFIRHTPALFRLSSKNALVELTVDSIPTIDEVQ 833          
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: A0A7S2SLN9_9STRA (Conserved oligomeric Golgi complex subunit 3 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLN9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.720e-16
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:   44 GSLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 118
            GS D  LFLIKHLLTLREQLTPF I F + + +L+F STR AL +F+     +F ++R+NALL L  D +P +DE
Sbjct:   68 GSEDGDLFLIKHLLTLREQLTPFDINFSQLKRRLDFSSTRQALSRFMAERGRVFAMTRQNALLSLAKDGLPQVDE 142          
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: W7U7M5_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7M5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.480e-15
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   43 EGSLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 118
            +G +DA LFL+KHLL LREQL PF I+F   E +L+F STR AL +F     +LFR+   NALL L + S+PT++E
Sbjct:  158 KGDMDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFNSTRGALTRFFVDRHNLFRMGTDNALLSLALGSVPTVNE 233          
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: A0A835YUG6_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG6_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 8.270e-15
Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 0
Query:   45 SLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTP--SLFRLSRKNALLELTVDSIPTIDEIQ 120
            SLD  LFL+KHLLTLREQL PF I F+R + KLNF +T  ALR+  + +   +LFRLS +N L++   +S+P +DE++
Sbjct:  816 SLDGHLFLVKHLLTLREQLEPFDISFMRNDRKLNFSTTVSALRRLAQPSSGLALFRLSMQNVLIQTAKNSLPAVDEVE 893          
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: A0A7S2XY61_9STRA (Conserved oligomeric Golgi complex subunit 3 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY61_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.080e-14
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 0
Query:   46 LDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 118
            LD  LFL+KHLL +REQLTPF IQF+  E KL+F  T  A   F++    LFR    NALL L  + IP++ E
Sbjct:    5 LDGNLFLVKHLLVMREQLTPFDIQFLAVEKKLDFTGTASAFYNFLQRRDRLFRFDGSNALLTLAKEGIPSVQE 77          
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: A0A482R5R2_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R5R2_9ARCH)

HSP 1 Score: 72.4 bits (176), Expect = 1.560e-12
Identity = 40/88 (45.45%), Postives = 52/88 (59.09%), Query Frame = 0
Query:   38 GAIGGEG-------SLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 118
            GA+GG         SLDA LFLIK+LL +REQL+PF +Q       L+F ST  A    + H P + RLSR NALL   ++ +PT+ E
Sbjct:  239 GALGGAAIAARHVTSLDADLFLIKNLLIVREQLSPFDVQTNATSKSLDFRSTSEAFSSLLAHLPQVLRLSRDNALLSFVMNGLPTVSE 326          
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: A0A3F2RQD8_9STRA (Conserved oligomeric Golgi complex subunit 3 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQD8_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.610e-11
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0
Query:   40 IGGEGSLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 118
            +  +G L   LFL+KHLLTLREQ+TPF IQF +    L+F S+  A+ + +    +LFRLS  N ++ L    IP I E
Sbjct:  596 VAAQGGLHGSLFLVKHLLTLREQITPFEIQFAQTSKALDFTSSGDAMNQLLADASTLFRLSGPNGIVGLFTRGIPQIQE 674          
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: A0A225WRW3_9STRA (Conserved oligomeric Golgi complex subunit 3 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WRW3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.530e-11
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0
Query:   43 EGSLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 118
            +G L   LFL+KHLLTLREQ+TPF IQF +    L+F S+  A+ + +  T +LFRLS  N ++ L    IP I E
Sbjct:  529 QGGLHGSLFLVKHLLTLREQITPFEIQFSQTSKALDFTSSADAMNELLVDTSTLFRLSGPNGIVGLFTRGIPQIQE 604          
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: A0A3M6VIY3_9STRA (Conserved oligomeric Golgi complex subunit 3 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIY3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 6.610e-11
Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 0
Query:   43 EGSLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLSRKNALLELTVDSIPTIDE 118
            +G L   LFL+KHLL LREQ+TPF IQF +    L+F S+  A+ + +  T +LFR S  N ++ L V  IP I E
Sbjct:  591 QGGLHGSLFLVKHLLILREQITPFEIQFAQTSKALDFTSSADAMNELLADTSTLFRFSGPNGIMGLFVRGIPHIQE 666          
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Match: A0A401Q3P5_SCYTO (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401Q3P5_SCYTO)

HSP 1 Score: 66.6 bits (161), Expect = 2.320e-10
Identity = 37/78 (47.44%), Postives = 45/78 (57.69%), Query Frame = 0
Query:   43 EGSLDAQLFLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFI--RHTPSLFRLSRKNALLELTVDSIPTIDE 118
            +   D QLFLIKHLL LREQ+ PFH  F   E  L+   TR A  K +  R  P LFRLS  N++LE  ++  P I E
Sbjct:  746 DAQTDGQLFLIKHLLILREQIAPFHTDFAIKEISLDLKKTREAAFKMLNPRSVPRLFRLSSNNSILEFLLEGSPVIKE 823          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106020.514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G064_ECTSI6.750e-4064.93Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S2SLN9_9STRA4.720e-1654.67Conserved oligomeric Golgi complex subunit 3 n=2 T... [more]
W7U7M5_9STRA1.480e-1552.63Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A835YUG6_9STRA8.270e-1551.28Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S2XY61_9STRA1.080e-1450.68Conserved oligomeric Golgi complex subunit 3 (Frag... [more]
A0A482R5R2_9ARCH1.560e-1245.45Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A3F2RQD8_9STRA2.610e-1144.30Conserved oligomeric Golgi complex subunit 3 n=4 T... [more]
A0A225WRW3_9STRA3.530e-1147.37Conserved oligomeric Golgi complex subunit 3 n=2 T... [more]
A0A3M6VIY3_9STRA6.610e-1146.05Conserved oligomeric Golgi complex subunit 3 n=2 T... [more]
A0A401Q3P5_SCYTO2.320e-1047.44Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007265Conserved oligomeric Golgi complex, subunit 3PANTHERPTHR13302CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3coord: 45..118

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007265Conserved oligomeric Golgi complex, subunit 3PANTHERPTHR13302CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3coord: 45..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig106020contigF-distichus_contig106020:226..1491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig106020.514.1mRNA_F-distichus_contig106020.514.1Fucus distichus monoicousmRNAF-distichus_contig106020 226..1491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig106020.514.1 ID=prot_F-distichus_contig106020.514.1|Name=mRNA_F-distichus_contig106020.514.1|organism=Fucus distichus monoicous|type=polypeptide|length=120bp
ALQRAAISISAGVHNHPAASPSSGGGGGGGGGARVVGGAIGGEGSLDAQL
FLIKHLLTLREQLTPFHIQFVRAEHKLNFGSTRMALRKFIRHTPSLFRLS
RKNALLELTVDSIPTIDEIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007265COG_su3