prot_F-distichus_contig104611.410.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig104611.410.1
Unique Nameprot_F-distichus_contig104611.410.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length169
Homology
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: UPI0018D881BB (roundabout homolog 1-like isoform X1 n=5 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D881BB)

HSP 1 Score: 75.5 bits (184), Expect = 9.560e-13
Identity = 49/162 (30.25%), Postives = 79/162 (48.77%), Query Frame = 0 
Query:    2 GTYTCVARNTINTDTDSGLLTVVGIKPKITIPSMPADQLLGA---DISWPCEVAEGKPAPTVLWYKDNLSVDLEAVSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVSDPVQVLFEKDSQVTFDCQHEVDSALLGGLQINWFKDGV 160
            G+Y C+A N+I T      +  V  +P  T P    D+++ A   +++  C V EG P P++ W + +  +      I +DNTL I    +   G Y+C+AENS G+++L + L V        +PV         V+F+C+  V  + L    I W KDG+
Sbjct:  217 GSYVCIATNSIGTRQSPPAILNVHARPSFTRPV--EDRIIAAPGDNVNLLC-VVEGDPTPSITWRRQDADMPQGRFQISDDNTLHIRQVLQEDEGTYICRAENSWGTETLTITLEVNTEPTFTREPVDQTVSVGQMVSFECK--VTGSPLPA--IFWQKDGL 371
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: A0A8B7YRH9_ACAPL (roundabout homolog 2-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YRH9_ACAPL)

HSP 1 Score: 74.7 bits (182), Expect = 1.760e-12
Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 0 
Query:    2 GTYTCVARNTINTDTDSGLLTVVGIKPKITIPSMPADQLLGA---DISWPCEVAEGKPAPTVLWYKDNLSVDLEAVSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVSDPVQVLFEKDSQVTFDCQ 140
            G+Y C+A N+I T      +  V  +P  T P    D+++ A   +++  C V EG P P+V W + +  +      I EDNTL I+   +   G Y+C+AENS G+++L + L V        +PV         V+F+C+
Sbjct:  216 GSYVCIATNSIGTRESPPAILNVHARPSFTRPVQ--DRIIAAPGDNVNLHC-VVEGDPIPSVTWRRRDADMPKGRFQIHEDNTLHISQVVQEDEGSYICRAENSWGTEALTITLEVNTEPTFTREPVDQTVSAGHMVSFECK 354
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: UPI001454F3B7 (roundabout homolog 1-like isoform X1 n=3 Tax=Asterias rubens TaxID=7604 RepID=UPI001454F3B7)

HSP 1 Score: 74.7 bits (182), Expect = 1.770e-12
Identity = 42/139 (30.22%), Postives = 69/139 (49.64%), Query Frame = 0 
Query:    2 GTYTCVARNTINTDTDSGLLTVVGIKPKITIPSMPADQLLGADISWPCEVAEGKPAPTVLWYKDNLSVDLEAVSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVSDPVQVLFEKDSQVTFDCQ 140
            G+Y C+A NTI T      +  V  +P  T P+  A    G  +   C V EG P PTV W + +  +      I EDN+L + +  +   G+Y+C+AEN  G++++ V L+V       ++P+         V+F+C+
Sbjct:  192 GSYVCIATNTIGTRQSPPAILNVHARPTFTRPAEDAIAAPGDTVDLHC-VVEGDPIPTVTWSRMDGDLPQGRFQIGEDNSLHLRHVIQDDEGIYICRAENGWGAETMMVTLDVNTEPTFTTEPLDQTVSIGQVVSFECK 329
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: A0A812F026_SEPPH (NRCAM n=3 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812F026_SEPPH)

HSP 1 Score: 71.2 bits (173), Expect = 2.760e-11
Identity = 40/116 (34.48%), Postives = 59/116 (50.86%), Query Frame = 0 
Query:   49 CEVAEGKPAPTVLWYKDNLSVDLEAVSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVSDPVQVLFEKDSQVTFDCQHEVDSALLGGLQINWFKDGVNLDL 164
            CE A+GKP P + W++ +  +  +   I     L I++     SG Y C+A N  G++S   EL VR  ++IV  P  ++        F C    DS     L+INW+KDGV +DL
Sbjct:  473 CE-ADGKPTPVISWFRRDQLIKSKRHEILPSGHLRISDVQPTDSGEYTCRARNRFGTNSSTGELAVRTKTMIVEAPEDMVVIAGKIALFTCHATTDSFEFKNLEINWYKDGVLIDL 587
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: UPI0010696446 (hemicentin-1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI0010696446)

HSP 1 Score: 70.1 bits (170), Expect = 6.580e-11
Identity = 43/123 (34.96%), Postives = 65/123 (52.85%), Query Frame = 0 
Query:    1 AGTYTCVARNTINTDTDSGLLTVVGIKPKITIP-SMPADQLLGADISWPCEVAEGKPAPTVLWYKDNLSVDLEAVSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVS 122
            AGTY CVA N+I +D+ S  L +V +KP +T+  S P     G   +  C      P  TV WYKD   +  +    +E  TL+I+N  K  SG+Y C+A+N+  +D  ++E+ V     I +
Sbjct:  454 AGTYVCVANNSIGSDSKSATL-IVTVKPTVTVSCSSPVIVKEGDHFTCVCTEQGSNPPATVAWYKDGKQISDQR---EERQTLSISNIEKKDSGMYRCEAKNTVSNDKKSIEIIVHYKPTITA 572
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: UPI0015AA6117 (basement membrane-specific heparan sulfate proteoglycan core protein-like n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AA6117)

HSP 1 Score: 69.7 bits (169), Expect = 7.160e-11
Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 0 
Query:    2 GTYTCVARNTINTDTDSGLLTVVGIKPKI-TIPSMPADQLLGADISWPCEVAEGKPAPTVLWYKDNLSVDLEAVSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVSDPVQVLFEKD------SQVTFDCQ 140
            GTY CV  N       S  LTV    PK+   P  PA   +G  I+  C  A G+P PTV W+++  +    + S +   T+ +  A    +G+YVCKAENSEG+  L V++ V   S   + P   + + D        VT  CQ
Sbjct:  102 GTYRCVGTNAHGKSQSSASLTV-HYSPKVQATPKSPARVRIGETINLECH-ATGRPRPTVTWHREGGAKTGTSSSTEAKATVQVQAARSEDAGVYVCKAENSEGTVELKVQVTVEGGSQAPTPPRASILQADMVKVEGDSVTLQCQ 245
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: A0A7M7NDJ2_STRPU (Uncharacterized protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7NDJ2_STRPU)

HSP 1 Score: 69.7 bits (169), Expect = 9.500e-11
Identity = 45/141 (31.91%), Postives = 70/141 (49.65%), Query Frame = 0 
Query:    2 GTYTCVARNTINTDTDSGLLTVVGIKPKITIPSMPADQLL--GADISWPCEVAEGKPAPTVLWYKDNLSVDLEAVSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVSDPVQVLFEKDSQVTFDCQ 140
            G Y CVA N+      +    ++  +P  T   +P D L   G  I+ PC VAEG+PAPT+ W K + ++ L   ++ +D++L I+NA    SG Y+C A+N+ G  S+   + V +  +    PV           F CQ
Sbjct:   58 GNYVCVATNSEGAKRSAAGRLIINSRPAFT--EVPFDTLAIPGETITLPC-VAEGEPAPTIRWVKQDGTLPLNRNTMLQDSSLRISNAESSDSGTYICTAQNTWGDKSVEAIVTVSSAPMFTRVPVDRTVVVGQDAFFLCQ 195
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: UPI001863A970 (basement membrane-specific heparan sulfate proteoglycan core protein-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001863A970)

HSP 1 Score: 67.0 bits (162), Expect = 6.100e-10
Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 0 
Query:    2 GTYTCVARNTINTDTDSGLLTVVGIKPKITI-PSMPADQLLGADISWPCEVAEGKPAPTVLWYKDNLSVDLEAVSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVSDPVQVLFEKD------SQVTFDCQ 140
            GTY CVA N       S  LTV    PKI I PS P     G  I   C  A G+P P+V W++       ++ S +    + ++ A    +G+YVCKA+NSEG+    VE+ V   + I + P   + + D      + VT  CQ
Sbjct:   88 GTYRCVATNAFGKAHGSASLTVKQ-SPKIDITPSGPVKVQAGEPIKLECH-ATGRPRPSVTWHRQGTGETGQSSSTEAKAVVQVSAARSEDAGVYVCKAQNSEGTAETKVEVKVEGGAQISTMPQASVLQTDMVAVEGATVTLHCQ 231
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: UPI0019399492 (hemicentin-1-like isoform X1 n=2 Tax=Styela clava TaxID=7725 RepID=UPI0019399492)

HSP 1 Score: 66.2 bits (160), Expect = 1.590e-9
Identity = 44/161 (27.33%), Postives = 71/161 (44.10%), Query Frame = 0 
Query:    2 GTYTCVARNTINTDTDSGLLTVVG-IKPKITIPSMPADQLLGADISWPCEVAEGKPAPTVLWYKDNLSVDLEA-VSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVSDPVQVLFEKDSQVTFDCQHEVDSALLGGLQINWFKDGV 160
            G YTC A N    D  S  + + G +KP IT+       ++G  I+ PC +  G P P+  W +D+   D    +S+ ++ ++ IT A    +G YVC A+N  G  S    L+V     I +        ++  +T  C+   +        + W K GV
Sbjct:  887 GLYTCSAANQFGGDAKSAEVDITGLVKPWITLTEERPHVIIGQSIALPCRITSGNPTPSRQWRRDSRVFDPTGRISVSQEGSVVITQAQSSDAGEYVCIAKNVAGEHSTNTMLDVWVPPSISTPETDYTTIEERSITLRCETSGNPVPT----VQWTKAGV 1043
[Close]
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Match: UPI000E459B61 (hemicentin-1 n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=UPI000E459B61)

HSP 1 Score: 65.1 bits (157), Expect = 4.000e-9
Identity = 44/162 (27.16%), Postives = 81/162 (50.00%), Query Frame = 0 
Query:    1 AGTYTCVARNTINTDTDSGLLTVVGIKPKITIPSMPADQL--LGADISWPCEVAEGKPAPTVLWYKDNLSVDLE-AVSIDEDNTLTITNANKGHSGLYVCKAENSEGSDSLAVELNVRNHSVIVSDPVQVLFEKDSQVTFDCQHEVDSALLGGLQINWFKDG 159
            AGTYTCVA N++ T    G + V   +P +    + ++ +  LG +    CEV  G P PT+ W K+ ++V++   + + ++ +L I       +G Y+C A N  G   ++V L ++    I  +PV+ + +  + V  +C+ E +   +    I W + G
Sbjct: 4302 AGTYTCVAENSVGTIKSLGFVYVK--EPPVIDGDLRSNHIEPLGGNAILNCEV-RGDPLPTIQWSKNGINVEISNRIRVLDNGSLAIYGTVSEDAGNYMCVATNDAGVVEMSVTLTLQRSPTITVEPVEPVVDAGNTVILNCKAEGEPTPM----IEWSRQG 4456
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig104611.410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0018D881BB9.560e-1330.25roundabout homolog 1-like isoform X1 n=5 Tax=Patir... [more]
A0A8B7YRH9_ACAPL1.760e-1230.99roundabout homolog 2-like n=1 Tax=Acanthaster plan... [more]
UPI001454F3B71.770e-1230.22roundabout homolog 1-like isoform X1 n=3 Tax=Aster... [more]
A0A812F026_SEPPH2.760e-1134.48NRCAM n=3 Tax=Sepia pharaonis TaxID=158019 RepID=A... [more]
UPI00106964466.580e-1134.96hemicentin-1-like n=1 Tax=Dendronephthya gigantea ... [more]
UPI0015AA61177.160e-1133.56basement membrane-specific heparan sulfate proteog... [more]
A0A7M7NDJ2_STRPU9.500e-1131.91Uncharacterized protein n=2 Tax=Echinacea TaxID=76... [more]
UPI001863A9706.100e-1033.56basement membrane-specific heparan sulfate proteog... [more]
UPI00193994921.590e-927.33hemicentin-1-like isoform X1 n=2 Tax=Styela clava ... [more]
UPI000E459B614.000e-927.16hemicentin-1 n=1 Tax=Mastacembelus armatus TaxID=2... [more]

Pages

back to top
InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 40..104
e-value: 8.3E-15
score: 65.2
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 34..115
e-value: 4.9E-6
score: 36.0
NoneNo IPR availablePFAMPF13927Ig_3coord: 27..101
e-value: 3.1E-14
score: 53.3
NoneNo IPR availablePANTHERPTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINcoord: 1..146
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 24..119
e-value: 8.4E-19
score: 69.5
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 28..113
score: 12.441
IPR036179Immunoglobulin-like domain superfamilySUPERFAMILY48726Immunoglobulincoord: 24..115

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 40..104
e-value: 8.3E-15
score: 65.2
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 34..115
e-value: 4.9E-6
score: 36.0
NoneNo IPR availablePFAMPF13927Ig_3coord: 27..101
e-value: 3.1E-14
score: 53.3
NoneNo IPR availablePANTHERPTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINcoord: 1..146
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 24..119
e-value: 8.4E-19
score: 69.5
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 28..113
score: 12.441
IPR036179Immunoglobulin-like domain superfamilySUPERFAMILY48726Immunoglobulincoord: 24..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig104611contigF-distichus_contig104611:1212..1718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig104611.410.1mRNA_F-distichus_contig104611.410.1Fucus distichus monoicousmRNAF-distichus_contig104611 1212..1718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig104611.410.1 ID=prot_F-distichus_contig104611.410.1|Name=mRNA_F-distichus_contig104611.410.1|organism=Fucus distichus monoicous|type=polypeptide|length=169bp
AGTYTCVARNTINTDTDSGLLTVVGIKPKITIPSMPADQLLGADISWPCE
VAEGKPAPTVLWYKDNLSVDLEAVSIDEDNTLTITNANKGHSGLYVCKAE
NSEGSDSLAVELNVRNHSVIVSDPVQVLFEKDSQVTFDCQHEVDSALLGG
LQINWFKDGVNLDLILSL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR007110Ig-like_dom
IPR036179Ig-like_dom_sf