prot_F-distichus_contig1038.340.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig1038.340.1
Unique Nameprot_F-distichus_contig1038.340.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length180
Homology
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BLAST of mRNA_F-distichus_contig1038.340.1 vs. uniprot
Match: A0A3Q7Y1T6_CICAR (uncharacterized protein LOC113787151 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A3Q7Y1T6_CICAR)

HSP 1 Score: 54.7 bits (130), Expect = 9.810e-6
Identity = 33/101 (32.67%), Postives = 57/101 (56.44%), Query Frame = 0 
Query:    1 NALLKVLDKENDIMEMVIDIGSPSKAWRALKNMVDESKEVAYD---RVKREFETLEMGADETVTEYFSRVNIALTKIQRHNVVMSEREIKRVILGSLMSRF 98
            N L + +DK   I++ +I   +  + W +LK     S+ V  +   R++R+FE LEM  +ET+TEYFS+V +  T+++     M + +I   IL +L  +F
Sbjct:   71 NYLFQAIDKS--ILKTIIQKNTSKQLWDSLKIKYQGSERVQREQLQRLRRDFEILEMKENETITEYFSKVLLVATEMRNMGEDMQDNKIVDKILRTLSEKF 169
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BLAST of mRNA_F-distichus_contig1038.340.1 vs. uniprot
Match: UPI000B90327D (uncharacterized protein LOC110944782 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B90327D)

HSP 1 Score: 53.9 bits (128), Expect = 1.250e-5
Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 0 
Query:    1 NALLKVLDKENDIMEMVIDIGSPSKAWRALKNMVDES---KEVAYDRVKREFETLEMGADETVTEYFSRVNIALTKIQRHNVVMSEREIKRVILGSLMSRF 98
            N L +++DK+  I++ +    S  + W A+K     +   K     R+++EFETLEM   E+VT+YFSRV +    +Q     M+E ++   +L SL   F
Sbjct:   73 NYLFQLIDKQ--ILKTITQKESAKQIWDAMKTKYKGNTRIKRAQLQRLRKEFETLEMKEGESVTDYFSRVMVISNNMQNCGEDMTEVKVVEKVLHSLTENF 171
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BLAST of mRNA_F-distichus_contig1038.340.1 vs. uniprot
Match: A0A6D2HJA6_9BRAS (CCHC-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HJA6_9BRAS)

HSP 1 Score: 53.9 bits (128), Expect = 2.740e-5
Identity = 40/136 (29.41%), Postives = 68/136 (50.00%), Query Frame = 0 
Query:    1 NALLKVLDKENDIMEMVIDIGSPSKAWRALKNMV---DESKEVAYDRVKREFETLEMGADETVTEYFSRVNIALTKIQRHNVVMSEREIKRVILGSLMSRFPSEMSVYAMQCDFELKDLETGLARAEKLQSDQKIR 133
            N L + +DK   I++ VI   +  + W +LK      +  K     R++REFE LEM   +++TEYFSRV +  T ++     M + +I   IL +L  RF     V +++   ++  L     ++  L  +QKI+
Sbjct:   70 NYLFQAIDKS--ILKTVIQKDTAKQLWDSLKIKYQGNERVKRAQLQRLRREFEILEMKETKSITEYFSRVLLTATDMRNLGEDMEDTKIVEKILRTLSERFT--YIVCSLEESKDIDSLTVDALQSSLLLHEQKIQ 201
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1038.340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A3Q7Y1T6_CICAR9.810e-632.67uncharacterized protein LOC113787151 n=1 Tax=Cicer... [more]
UPI000B90327D1.250e-532.67uncharacterized protein LOC110944782 n=1 Tax=Helia... [more]
A0A6D2HJA6_9BRAS2.740e-529.41CCHC-type domain-containing protein n=1 Tax=Microt... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 11..117
e-value: 1.3E-8
score: 34.6

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 11..117
e-value: 1.3E-8
score: 34.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig1038contigF-distichus_contig1038:22790..23329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig1038.340.1mRNA_F-distichus_contig1038.340.1Fucus distichus monoicousmRNAF-distichus_contig1038 22790..23329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig1038.340.1 ID=prot_F-distichus_contig1038.340.1|Name=mRNA_F-distichus_contig1038.340.1|organism=Fucus distichus monoicous|type=polypeptide|length=180bp
NALLKVLDKENDIMEMVIDIGSPSKAWRALKNMVDESKEVAYDRVKREFE
TLEMGADETVTEYFSRVNIALTKIQRHNVVMSEREIKRVILGSLMSRFPS
EMSVYAMQCDFELKDLETGLARAEKLQSDQKIRSTSSHALAAARVGGGQI
ESGGGACGRGRHGRHSSRRHNDGRGRYQQQ
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