prot_F-distichus_contig103404.304.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig103404.304.1
Unique Nameprot_F-distichus_contig103404.304.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length203
Homology
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: D8LPY6_ECTSI (PsbP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY6_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 8.480e-73
Identity = 126/207 (60.87%), Postives = 158/207 (76.33%), Query Frame = 0
Query:    1 EDSVSLLVRDFRERVEELREQVGT----TDAGGNVELKDVAQKFRNVLQGDPAAVEELRARVLERLEDVREEIEELLEIKELSKASDRLEKATTESAELVFDSAVTAMTKGLDALINDGKEVVPVGQATETLQVSTYTFGETNEFWDDLEANGVTPRRLFLYNLLGAGVVLGGNLFGVTSGLLG-FAPESSRGARLDVIFPVRGFKR 202
            ED++++L +D RE VE+L +QVG      D  G VELKDVAQKF+ VL+GDPA V+ELR +VL+ LE+VREEIEELLE+KELSKA  +LEKAT ES E+V DSA  A+ KG+D ++N+GK+ +P G+ TE  QVSTY FG+ NE WDD+ ANGVT  R   Y+LLG  V LGGNLFGVTS LLG  APE+SR  R+D++FP+ GFKR
Sbjct:  115 EDTLAVLAKDVRELVEDLMDQVGVGSGADDKAGLVELKDVAQKFKGVLRGDPAVVQELRRQVLDDLEEVREEIEELLEVKELSKARAKLEKATAESTEMVLDSAAAALAKGIDKVVNEGKDAIPEGEETEKFQVSTYFFGKENELWDDMRANGVTRERFVRYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKR 321          
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: A0A6H5KJV3_9PHAE (PsbP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV3_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 1.320e-70
Identity = 123/207 (59.42%), Postives = 160/207 (77.29%), Query Frame = 0
Query:    1 EDSVSLLVRDFRERVEELREQVGT----TDAGGNVELKDVAQKFRNVLQGDPAAVEELRARVLERLEDVREEIEELLEIKELSKASDRLEKATTESAELVFDSAVTAMTKGLDALINDGKEVVPVGQATETLQVSTYTFGETNEFWDDLEANGVTPRRLFLYNLLGAGVVLGGNLFGVTSGLLG-FAPESSRGARLDVIFPVRGFKR 202
            +D++++L ++ RE VE+L +QVG      +  G VELKDVAQKF+ VL+GDPAAV+ELR +VL+ LE+VREEIEELLE+KELSKA  +LEKAT ES E+V DSA  A+ KG+D ++N+G++ +P G+ TE  QVSTY FG+ NE W+D+ ANGVT  R  LY+LLG  V LGGNLFGVTS LLG  APE+SR  R+D++FP+ GFKR
Sbjct:  211 DDTLAVLAKEVRELVEDLMDQVGVGSGADEKAGLVELKDVAQKFKGVLRGDPAAVQELRRQVLDDLEEVREEIEELLEVKELSKARAKLEKATAESTEMVLDSAAAALAKGIDKVVNEGRDAIPEGEETEKFQVSTYFFGKENELWNDMRANGVTRERFVLYSLLGGAVALGGNLFGVTSALLGSVAPEASRDLRVDLLFPIGGFKR 417          
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: A0A835YU89_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU89_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.830e-24
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = 0
Query:   74 EIKELSKAS-DRLEKATTESAELVFDSAVTAMTKGLD-ALINDGKEVVPVGQATETLQVSTYTFGETNEFWDDLEANGVTPRRLFLYNLLGAGVVLGGNLFGVTSGLLGFAPESSRGARLDVIFPVRGFKR 202
            E++E+SKA+ + + KA   + E   D AV     GLD A  N GK    +    E+  V+TY FG+ NEFW+D++ NGV PRR FLY  L A V +GGNLFGVTS LLG AP+ +  ++LDV++PV+GFKR
Sbjct:   24 EMREMSKAAIEAVTKAGVNAEEAARDIAVKIGEAGLDVATGNLGKNQPSLDD--ESFSVTTYFFGKDNEFWEDMQRNGVQPRRFFLYTGLSAAVAVGGNLFGVTSALLGAAPKLAERSQLDVLYPVKGFKR 152          
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: A0A0G4GW09_VITBC (PsbP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GW09_VITBC)

HSP 1 Score: 67.0 bits (162), Expect = 1.130e-9
Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 0
Query:  144 DLEANGVTPRRLFLYNLLGAGVV-LGGNLFGVTSGLLGFAPESSRGARLDVIFPVRGFKR 202
            ++E + +TPRR FL  LLGA VV LG NLFG+TS LL  +PE +R  RLDVI+P+ GFKR
Sbjct:   84 EIEPDSITPRRRFLV-LLGAAVVALGANLFGITSALLRLSPEQARKLRLDVIYPIDGFKR 142          
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: A0A1Y1I0H8_KLENI (PsbP family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I0H8_KLENI)

HSP 1 Score: 64.7 bits (156), Expect = 4.050e-9
Identity = 32/50 (64.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  153 RRLFLYNLLGAGVVLGGNLFGVTSGLLGFAPESSRGARLDVIFPVRGFKR 202
            RRLF   + G  V LGGNL GVTSGLLG  PE+SR  +LD +FPV+GFKR
Sbjct:   10 RRLFYSGVTGLAVTLGGNLGGVTSGLLGLNPEASRQLKLDTLFPVKGFKR 59          
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: A0A7S0BH31_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BH31_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 1.650e-8
Identity = 33/71 (46.48%), Postives = 41/71 (57.75%), Query Frame = 0
Query:  132 TYTFGETNEFWDDLEANGVTPRRLFLYNLLGAGVVLGGNLFGVTSGLLGFAPESSRGARLDVIFPVRGFKR 202
            TY FG+  EF  DL   G   RR F    +   +VLGGNL G TS +L     +SR  +LDV++PV GFKR
Sbjct:   53 TYLFGKEGEFDRDLGVLGSDRRRFFTGLGISTALVLGGNLLGSTSAVLSMNANTSRALKLDVVYPVGGFKR 123          
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: A0A7S0BHH0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHH0_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 1.030e-7
Identity = 33/71 (46.48%), Postives = 41/71 (57.75%), Query Frame = 0
Query:  132 TYTFGETNEFWDDLEANGVTPRRLFLYNLLGAGVVLGGNLFGVTSGLLGFAPESSRGARLDVIFPVRGFKR 202
            TY FG+  EF  DL   G   RR F    +   +VLGGNL G TS +L     +SR  +LDV++PV GFKR
Sbjct:  119 TYLFGKEGEFDRDLGVLGSDRRRFFNGLGISTALVLGGNLLGSTSAVLSMNANTSRALKLDVVYPVGGFKR 189          
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: A0A7S3ENR3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENR3_9RHOD)

HSP 1 Score: 61.2 bits (147), Expect = 1.350e-7
Identity = 34/77 (44.16%), Postives = 43/77 (55.84%), Query Frame = 0
Query:  126 ETLQVSTYTFGETNEFWDDLEANGVTPRRLFLYNLLGAGVVLGGNLFGVTSGLLGFAPESSRGARLDVIFPVRGFKR 202
            E   + T+ FG+  EF  DL   G   RR F    L   +VLGGNL G TS +L     +SR  +LDV++PV GFKR
Sbjct:  123 EKTDLRTFLFGKEGEFDRDLGVLGSDRRRFFTGLGLSTALVLGGNLLGSTSAVLSMNANTSRALKLDVVYPVGGFKR 199          
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: C1E570_MICCC (PsbP domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E570_MICCC)

HSP 1 Score: 56.6 bits (135), Expect = 3.250e-6
Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  151 TPRRLFLYNLLGAGVVLGGNLFGVTSGLLGFAPESSRGARLDVIFPVRGFKR 202
            +PRR+FL  L  AG+ LGGN  G+T  LL   P+ +   RLD+I+PV GFKR
Sbjct:   12 SPRRVFLGTLATAGLALGGNFLGITGKLLNGVPDVAESLRLDLIYPVGGFKR 63          
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Match: A0A4D9CU31_9STRA (PsbP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU31_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 3.650e-6
Identity = 32/72 (44.44%), Postives = 42/72 (58.33%), Query Frame = 0
Query:  133 YTFGETNEFWDDLEANGVTPRRLFLYNLLGAGVVLGGNLFGVTSGLLGF--APESSRGARLDVIFPVRGFKR 202
            Y FG   EF +DL   G++ +RL L   +   + LG N  GVTS LL     PE+    +LDV++PVRGFKR
Sbjct:    3 YFFGTAGEFDEDLAYLGISRQRLLLNAGVATTLALGANFVGVTSALLNTFSTPETMSDLKLDVLYPVRGFKR 74          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103404.304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LPY6_ECTSI8.480e-7360.87PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KJV3_9PHAE1.320e-7059.42PsbP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YU89_9STRA1.830e-2448.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4GW09_VITBC1.130e-960.00PsbP domain-containing protein n=1 Tax=Vitrella br... [more]
A0A1Y1I0H8_KLENI4.050e-964.00PsbP family protein n=1 Tax=Klebsormidium nitens T... [more]
A0A7S0BH31_9RHOD1.650e-846.48Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0BHH0_9RHOD1.030e-746.48Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S3ENR3_9RHOD1.350e-744.16Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
C1E570_MICCC3.250e-651.92PsbP domain-containing protein n=1 Tax=Micromonas ... [more]
A0A4D9CU31_9STRA3.650e-644.44PsbP domain-containing protein n=1 Tax=Nannochloro... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..155
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..155
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig103404contigF-distichus_contig103404:23..1837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig103404.304.1mRNA_F-distichus_contig103404.304.1Fucus distichus monoicousmRNAF-distichus_contig103404 23..1837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig103404.304.1 ID=prot_F-distichus_contig103404.304.1|Name=mRNA_F-distichus_contig103404.304.1|organism=Fucus distichus monoicous|type=polypeptide|length=203bp
EDSVSLLVRDFRERVEELREQVGTTDAGGNVELKDVAQKFRNVLQGDPAA
VEELRARVLERLEDVREEIEELLEIKELSKASDRLEKATTESAELVFDSA
VTAMTKGLDALINDGKEVVPVGQATETLQVSTYTFGETNEFWDDLEANGV
TPRRLFLYNLLGAGVVLGGNLFGVTSGLLGFAPESSRGARLDVIFPVRGF
KR*
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