prot_F-distichus_contig10283.247.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10283.247.1
Unique Nameprot_F-distichus_contig10283.247.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length84
Homology
[Close]
BLAST of mRNA_F-distichus_contig10283.247.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.840e-14
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 0 
Query:    1 LYSGTAVRHDPGRVRGLVEIRRPWTVGELMTFLQATSWMRLSLAHMAVIEAPLRALMK-HLLKGTSRAKRKASRRALTDGDWT 82
            +YSG  V HDP R++GL ++RRP T GELM  LQA +W+R SL  +A +  PLR L++ H+     R KR AS RA+    WT
Sbjct:  787 VYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRAIKSEAWT 869
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10283.247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9E0_9PHAE1.840e-1448.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 3..59

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 3..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10283contigF-distichus_contig10283:5029..5280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10283.247.1mRNA_F-distichus_contig10283.247.1Fucus distichus monoicousmRNAF-distichus_contig10283 5029..5280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10283.247.1 ID=prot_F-distichus_contig10283.247.1|Name=mRNA_F-distichus_contig10283.247.1|organism=Fucus distichus monoicous|type=polypeptide|length=84bp
LYSGTAVRHDPGRVRGLVEIRRPWTVGELMTFLQATSWMRLSLAHMAVIE
APLRALMKHLLKGTSRAKRKASRRALTDGDWTPE
back to top