prot_F-distichus_contig102522.217.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig102522.217.1
Unique Nameprot_F-distichus_contig102522.217.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length173
Homology
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BLAST of mRNA_F-distichus_contig102522.217.1 vs. uniprot
Match: D7FN51_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN51_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 5.960e-24
Identity = 87/201 (43.28%), Postives = 104/201 (51.74%), Query Frame = 0 
Query:    1 QVLSVNQTNGDVIRVSSGEPVRCCTTCTRILDYQLSQALKRKGWGARSVAAAAATGSER------GTSRVLPSTIGGGYAASLPRYSDH-TESFDGGGFAPPTVHNRDQGGDNNSRARVDL-----------------GSRRQSEDH-RRV--GDADPLARVDQRQPQPEYSRPPPRF-DPPPQAEGVPSWLGKGSSGSRK 173
            +VLSVNQT G VIR+SSGEPVRCCT CTR+LD QL+ AL+RKGWGAR    AA     +       +S    +  G GYAA+LP  S   TE +DGGGF PP   +R    +                          G    SE   RR+  G  DPLA V +  P P    PP R+ +P P A  VPSWLGK S GS +
Sbjct:  305 KVLSVNQTTGAVIRLSSGEPVRCCTPCTRVLDQQLAHALQRKGWGARHGTPAAINAIRKRFPGPSSSSTPFVAAGGAGYAATLPILSAAATEGYDGGGFVPPPSTSRPNAEEXXXXXXXXXXXXXXXXXXXXYHGGGDGRGYDSESPVRRMKHGVEDPLASVQEHSPPP----PPRRWQEPQPTAGEVPSWLGKSSLGSSR 501
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102522.217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FN51_ECTSI5.960e-2443.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102522contigF-distichus_contig102522:289..1083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102522.217.1mRNA_F-distichus_contig102522.217.1Fucus distichus monoicousmRNAF-distichus_contig102522 289..1083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig102522.217.1 ID=prot_F-distichus_contig102522.217.1|Name=mRNA_F-distichus_contig102522.217.1|organism=Fucus distichus monoicous|type=polypeptide|length=173bp
QVLSVNQTNGDVIRVSSGEPVRCCTTCTRILDYQLSQALKRKGWGARSVA
AAAATGSERGTSRVLPSTIGGGYAASLPRYSDHTESFDGGGFAPPTVHNR
DQGGDNNSRARVDLGSRRQSEDHRRVGDADPLARVDQRQPQPEYSRPPPR
FDPPPQAEGVPSWLGKGSSGSRK
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