prot_F-distichus_contig101227.95.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101227.95.1
Unique Nameprot_F-distichus_contig101227.95.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length66
Homology
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: D8LNW5_ECTSI (Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW5_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 5.970e-17
Identity = 40/52 (76.92%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 VQGAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLVK 52
            VQGAVSPLAVVND EG+A LAMDK +++A ++LVHPLRNDRSVR+KA DLVK
Sbjct:  285 VQGAVSPLAVVNDVEGVARLAMDKSVMEAEEVLVHPLRNDRSVRIKAADLVK 336          
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: A0A7S3ANH3_9EUKA (Proline--tRNA ligase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ANH3_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 7.230e-8
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    2 QGAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLVK 52
            QG+VSPLAV+ND  G  TL +DK+L+ A+ + VHPLRND + ++   DL K
Sbjct:  105 QGSVSPLAVMNDTTGAVTLCIDKELMQANYVGVHPLRNDMTNQISPDDLTK 155          
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: L1JN40_GUITC (Proline--tRNA ligase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JN40_GUITC)

HSP 1 Score: 55.5 bits (132), Expect = 2.530e-7
Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 VQGAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLVK 52
            ++G+V+P A +ND E   T A+DKDL+    L +HPL ND+S  + A +LVK
Sbjct:  100 IKGSVTPFAAINDTENKCTFAIDKDLMKEQTLWLHPLHNDKSTSISADNLVK 151          
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: H3GKZ2_PHYRM (Proline--tRNA ligase n=21 Tax=Phytophthora TaxID=4783 RepID=H3GKZ2_PHYRM)

HSP 1 Score: 52.0 bits (123), Expect = 4.240e-6
Identity = 24/51 (47.06%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    2 QGAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLVK 52
            +G+VSPL V++D +    L +DK LVD + +  HPLRND++  +KA+DL+K
Sbjct:  110 KGSVSPLCVMHDAKNEVRLVLDKALVDTTLVNCHPLRNDQTYAIKAEDLLK 160          
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: A0A7S3H5B0_9STRA (Proline--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5B0_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 7.920e-6
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    1 VQGAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLV 51
            ++GAVSP A+VND        +DK L+DA  + +HPLRNDR+  +   DLV
Sbjct:   99 IRGAVSPFALVNDSAAEVKFVIDKALLDAELINIHPLRNDRTTSIPPADLV 149          
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: A0A2P4YQK5_9STRA (Proline--tRNA ligase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YQK5_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 1.440e-5
Identity = 22/51 (43.14%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    2 QGAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLVK 52
            +G+VSPL V++D +      +DK L+D + +  HPLRND++  ++AQDL+K
Sbjct:  110 KGSVSPLCVMHDAKNEVRFVLDKALLDTTQVNCHPLRNDQTYSIQAQDLLK 160          
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: A0A3D5I4S0_9PROT (Prolyl-tRNA synthetase associated domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D5I4S0_9PROT)

HSP 1 Score: 49.7 bits (117), Expect = 1.530e-5
Identity = 21/50 (42.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    3 GAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLVK 52
            GAVSPL ++ND +   TL +D+ ++DA  + +HPL ND++V +   DL++
Sbjct:  118 GAVSPLTLINDPDHQVTLVIDRAILDADKVNLHPLVNDKTVTISTTDLIR 167          
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: A0A0Q6ABM7_9BRAD (tRNA_edit domain-containing protein n=1 Tax=Bradyrhizobium sp. Leaf396 TaxID=1736363 RepID=A0A0Q6ABM7_9BRAD)

HSP 1 Score: 49.3 bits (116), Expect = 1.940e-5
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query:    1 VQGAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLVKVGLGFRSC 60
            V GA++PL ++ND EG+ T  +D  L++A  L  HPL N  S  L+  DL+      RSC
Sbjct:  107 VPGALTPLGLINDIEGVVTAVIDASLLNADQLNFHPLINTESTGLRPDDLLTF---IRSC 163          
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: A0A484ED02_BRELC (Proline--tRNA ligase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ED02_BRELC)

HSP 1 Score: 49.7 bits (117), Expect = 2.800e-5
Identity = 22/50 (44.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    2 QGAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLV 51
            +G+VSPL V++D +    L +DK L+D++ +  HPLRND++  +KA DL+
Sbjct:  108 KGSVSPLCVMHDVKCEVRLVLDKALLDSTQINCHPLRNDQTYSIKADDLL 157          
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Match: UPI001FDA3708 (hypothetical protein n=1 Tax=Pseudaminobacter manganicus TaxID=1873176 RepID=UPI001FDA3708)

HSP 1 Score: 46.2 bits (108), Expect = 5.820e-5
Identity = 21/49 (42.86%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    3 GAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDLV 51
            GA+SPL ++ND EGL T+ +D  L+D S +  HPL    S+ L   +L+
Sbjct:   10 GALSPLGLINDEEGLVTVVVDAFLMDTSQINFHPLMRTESIGLAPHELL 58          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101227.95.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LNW5_ECTSI5.970e-1776.92Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S3ANH3_9EUKA7.230e-852.94Proline--tRNA ligase n=1 Tax=Haptolina ericina Tax... [more]
L1JN40_GUITC2.530e-746.15Proline--tRNA ligase n=2 Tax=Guillardia theta TaxI... [more]
H3GKZ2_PHYRM4.240e-647.06Proline--tRNA ligase n=21 Tax=Phytophthora TaxID=4... [more]
A0A7S3H5B0_9STRA7.920e-647.06Proline--tRNA ligase n=1 Tax=Spumella elongata Tax... [more]
A0A2P4YQK5_9STRA1.440e-543.14Proline--tRNA ligase (Fragment) n=1 Tax=Phytophtho... [more]
A0A3D5I4S0_9PROT1.530e-542.00Prolyl-tRNA synthetase associated domain-containin... [more]
A0A0Q6ABM7_9BRAD1.940e-541.67tRNA_edit domain-containing protein n=1 Tax=Bradyr... [more]
A0A484ED02_BRELC2.800e-544.00Proline--tRNA ligase n=1 Tax=Bremia lactucae TaxID... [more]
UPI001FDA37085.820e-542.86hypothetical protein n=1 Tax=Pseudaminobacter mang... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilyGENE3D3.90.960.10coord: 1..66
e-value: 2.0E-10
score: 42.6
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilySUPERFAMILY55826YbaK/ProRS associated domaincoord: 2..53
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainPFAMPF04073tRNA_editcoord: 2..52
e-value: 9.7E-6
score: 25.7

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilyGENE3D3.90.960.10coord: 1..66
e-value: 2.0E-10
score: 42.6
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilySUPERFAMILY55826YbaK/ProRS associated domaincoord: 2..53
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainPFAMPF04073tRNA_editcoord: 2..52
e-value: 9.7E-6
score: 25.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101227contigF-distichus_contig101227:1..198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101227.95.1mRNA_F-distichus_contig101227.95.1Fucus distichus monoicousmRNAF-distichus_contig101227 1..198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101227.95.1 ID=prot_F-distichus_contig101227.95.1|Name=mRNA_F-distichus_contig101227.95.1|organism=Fucus distichus monoicous|type=polypeptide|length=66bp
VQGAVSPLAVVNDFEGLATLAMDKDLVDASDLLVHPLRNDRSVRLKAQDL
VKVGLGFRSCVVAFVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036754YbaK/aa-tRNA-synt-asso_dom_sf
IPR007214YbaK/aa-tRNA-synth-assoc-dom