prot_F-distichus_contig101124.88.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101124.88.1
Unique Nameprot_F-distichus_contig101124.88.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length113
Homology
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BLAST of mRNA_F-distichus_contig101124.88.1 vs. uniprot
Match: A0A354GIT4_9FLAO (Uncharacterized protein n=1 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A354GIT4_9FLAO)

HSP 1 Score: 76.6 bits (187), Expect = 9.420e-16
Identity = 38/109 (34.86%), Postives = 67/109 (61.47%), Query Frame = 0 
Query:    1 MLNRIHTLKTIKQLKPNQHLDFLKNCPDECIHAVCEACYNILNQSLKFSKDQKHRLKKKLKPIRDDVRKLSNPKLSVKTKREILRKPQVGKGIFTLLATTVLPALISSL 109
            +L ++  LK I Q      +  L    D+CIH +CE C N+L  +    K++   ++++LK  R  +R  S P+ S++ KR+IL   Q+G GIF++LA+T++PAL++++
Sbjct:   12 VLTKLEPLKKISQKHRTSIVPLLS---DDCIHKICEGCQNLLQNTFDLDKNKTRIVQRRLKKHRRVMRLFSKPETSIRRKRKILANQQIGSGIFSILASTIIPALVAAI 117
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101124.88.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A354GIT4_9FLAO9.420e-1634.86Uncharacterized protein n=1 Tax=Tenacibaculum sp. ... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..110
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..110
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101124contigF-distichus_contig101124:1566..1904 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101124.88.1mRNA_F-distichus_contig101124.88.1Fucus distichus monoicousmRNAF-distichus_contig101124 1566..1910 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101124.88.1 ID=prot_F-distichus_contig101124.88.1|Name=mRNA_F-distichus_contig101124.88.1|organism=Fucus distichus monoicous|type=polypeptide|length=113bp
MLNRIHTLKTIKQLKPNQHLDFLKNCPDECIHAVCEACYNILNQSLKFSK
DQKHRLKKKLKPIRDDVRKLSNPKLSVKTKREILRKPQVGKGIFTLLATT
VLPALISSLLSK*
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