prot_F-distichus_contig100919.72.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig100919.72.1
Unique Nameprot_F-distichus_contig100919.72.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length95
Homology
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BLAST of mRNA_F-distichus_contig100919.72.1 vs. uniprot
Match: D7FMA3_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA3_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.510e-18
Identity = 53/90 (58.89%), Postives = 66/90 (73.33%), Query Frame = 0 
Query:    2 VKLACSLALLAIGLNNAASSLTTRQRVGLVEALHDHLKGK-AAAPVSLGAVPDSQEK-GGVCADRDGVFLKAALQYLSSVEVAAEVEKDE 89
            VKL CSLA+L +GL++AAS L   +RVGLVE LH HLKGK  +A V+LG   + +   GGVCAD +GVFLK AL YLSS +VA+ V K+E
Sbjct: 1634 VKLTCSLAVLVVGLSDAASWLDAPRRVGLVETLHAHLKGKPGSAAVTLGGALEGRAGYGGVCADGEGVFLKTALLYLSSQQVASAVRKEE 1723
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BLAST of mRNA_F-distichus_contig100919.72.1 vs. uniprot
Match: A0A6H5KF24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF24_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.990e-16
Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 0 
Query:    8 LALLAIGLNNAASSLTTRQRVGLVEALHDHLKGK-AAAPVSLGAVPDSQEK-GGVCADRDGVFLKAALQYLSSVEVAAEVEKDE 89
            +A+L +GL++AASSL TR+RVGLVE LH HLKGK  +A V+LG   + +   GGVCAD +GVFLK AL YLSS +VA+ V +++
Sbjct:    1 MAVLVVGLSDAASSLDTRRRVGLVETLHAHLKGKPGSAAVTLGGALEGRAGYGGVCADGEGVFLKTALLYLSSQQVASAVREED 84
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100919.72.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMA3_ECTSI3.510e-1858.89PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KF24_9PHAE1.990e-1657.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.628

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.628

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig100919contigF-distichus_contig100919:76..886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig100919.72.1mRNA_F-distichus_contig100919.72.1Fucus distichus monoicousmRNAF-distichus_contig100919 76..887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig100919.72.1 ID=prot_F-distichus_contig100919.72.1|Name=mRNA_F-distichus_contig100919.72.1|organism=Fucus distichus monoicous|type=polypeptide|length=95bp
SVKLACSLALLAIGLNNAASSLTTRQRVGLVEALHDHLKGKAAAPVSLGA
VPDSQEKGGVCADRDGVFLKAALQYLSSVEVAAEVEKDEAAAASD
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