prot_F-distichus_contig10090.70.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10090.70.1
Unique Nameprot_F-distichus_contig10090.70.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length54
Homology
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: D7G6C8_ECTSI (L51_S25_CI-B8 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C8_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 5.420e-13
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    9 REFFKNNYAELKTQNPAFPILLREGTGANPYLLATY 44
            REFF+ NYAELK  NP FPILLREGTGA+PYLLATY
Sbjct:   29 REFFRTNYAELKALNPGFPILLREGTGADPYLLATY 64          
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: UPI001C35FD70 (Uncharacterized protein n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI001C35FD70)

HSP 1 Score: 50.4 bits (119), Expect = 5.410e-7
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    9 REFFKNNYAELKTQNPAFPILLREGTGANPYLLATYGE 46
            REF KNNY  +K +NP FPIL+RE +G  P + A YG+
Sbjct:   27 REFIKNNYVNIKKENPNFPILIRECSGVQPRVWARYGK 64          
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: A0A0L7K267_9NEOP (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7K267_9NEOP)

HSP 1 Score: 50.1 bits (118), Expect = 1.240e-6
Identity = 21/37 (56.76%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    9 REFFKNNYAELKTQNPAFPILLREGTGANPYLLATYG 45
            REF KNNY  +K +NP+FPIL+RE +G  P + A YG
Sbjct:   27 REFIKNNYVNIKKENPSFPILIRECSGVMPCVWARYG 63          
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: UPI001F5C0CFA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like n=4 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C0CFA)

HSP 1 Score: 48.5 bits (114), Expect = 6.630e-6
Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 0
Query:    9 REFFKNNYAELKTQNPAFPILLREGTGANPYLLATY 44
            REF K NY ++KT NPA PIL+RE +G  P L A Y
Sbjct:   29 REFVKKNYGDIKTHNPALPILIRECSGVQPQLWARY 64          
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: UPI00118232FE (Uncharacterized protein n=2 Tax=Manduca sexta TaxID=7130 RepID=UPI00118232FE)

HSP 1 Score: 47.8 bits (112), Expect = 1.100e-5
Identity = 20/38 (52.63%), Postives = 26/38 (68.42%), Query Frame = 0
Query:    9 REFFKNNYAELKTQNPAFPILLREGTGANPYLLATYGE 46
            REF KNNY  +K +NP FPIL+RE +G  P + A Y +
Sbjct:   27 REFIKNNYVNIKKENPNFPILIRECSGVQPRVWARYDK 64          
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: A0A0L7LL10_9NEOP (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7LL10_9NEOP)

HSP 1 Score: 47.8 bits (112), Expect = 1.270e-5
Identity = 20/36 (55.56%), Postives = 26/36 (72.22%), Query Frame = 0
Query:    9 REFFKNNYAELKTQNPAFPILLREGTGANPYLLATY 44
            REF KNNY  +K +NP+FPIL+RE +G  P + A Y
Sbjct:   27 REFIKNNYVNIKKENPSFPILIRECSGVMPCVWARY 62          
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: UPI001182AD94 (Uncharacterized protein n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI001182AD94)

HSP 1 Score: 47.4 bits (111), Expect = 1.560e-5
Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0
Query:    9 REFFKNNYAELKTQNPAFPILLREGTGANPYLLATY 44
            REF KNNY  +K +NP FPIL+RE +G  P + A Y
Sbjct:   27 REFIKNNYVNIKKENPNFPILIRECSGVQPRVWARY 62          
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: Q2F672_BOMMO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 n=3 Tax=cellular organisms TaxID=131567 RepID=Q2F672_BOMMO)

HSP 1 Score: 47.0 bits (110), Expect = 2.200e-5
Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0
Query:    9 REFFKNNYAELKTQNPAFPILLREGTGANPYLLATY 44
            REF KNNY  +K +NP FPIL+RE +G  P + A Y
Sbjct:   27 REFIKNNYVNIKKENPNFPILIRECSGIQPRVWARY 62          
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: UPI000B3CAEA9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 isoform X1 n=1 Tax=Bombyx mori TaxID=7091 RepID=UPI000B3CAEA9)

HSP 1 Score: 47.0 bits (110), Expect = 2.200e-5
Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0
Query:    9 REFFKNNYAELKTQNPAFPILLREGTGANPYLLATY 44
            REF KNNY  +K +NP FPIL+RE +G  P + A Y
Sbjct:   27 REFIKNNYVNIKKENPNFPILIRECSGIQPRVWARY 62          
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Match: A0A0D2RUK2_GOSRA (L51_S25_CI-B8 domain-containing protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2RUK2_GOSRA)

HSP 1 Score: 46.2 bits (108), Expect = 3.490e-5
Identity = 21/40 (52.50%), Postives = 25/40 (62.50%), Query Frame = 0
Query:    6 ALCREFFKNNYAELKTQNPAFPILLREGTGANPYLLATYG 45
            A  R F + NY +LKT NP FPIL+RE  G  P + A YG
Sbjct:   26 ASARSFVEQNYKDLKTLNPKFPILIRECRGIEPQIWARYG 65          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10090.70.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G6C8_ECTSI5.420e-1383.33L51_S25_CI-B8 domain-containing protein n=2 Tax=Ec... [more]
UPI001C35FD705.410e-755.26Uncharacterized protein n=1 Tax=Manduca sexta TaxI... [more]
A0A0L7K267_9NEOP1.240e-656.76NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
UPI001F5C0CFA6.630e-658.33NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
UPI00118232FE1.100e-552.63Uncharacterized protein n=2 Tax=Manduca sexta TaxI... [more]
A0A0L7LL10_9NEOP1.270e-555.56NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
UPI001182AD941.560e-555.56Uncharacterized protein n=1 Tax=Manduca sexta TaxI... [more]
Q2F672_BOMMO2.200e-555.56NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
UPI000B3CAEA92.200e-555.56NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A0D2RUK2_GOSRA3.490e-552.50L51_S25_CI-B8 domain-containing protein n=1 Tax=Go... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 2..51
e-value: 1.8E-10
score: 42.9
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 9..45
e-value: 4.9E-8
score: 32.8
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..45

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 2..51
e-value: 1.8E-10
score: 42.9
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 9..45
e-value: 4.9E-8
score: 32.8
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 8..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10090contigF-distichus_contig10090:78..239 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10090.70.1mRNA_F-distichus_contig10090.70.1Fucus distichus monoicousmRNAF-distichus_contig10090 78..239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10090.70.1 ID=prot_F-distichus_contig10090.70.1|Name=mRNA_F-distichus_contig10090.70.1|organism=Fucus distichus monoicous|type=polypeptide|length=54bp
MCSRFALCREFFKNNYAELKTQNPAFPILLREGTGANPYLLATYGEPSAN
MYM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosome/NADH_DH
IPR036249Thioredoxin-like_sf