prot_F-distichus_contig100047.8.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig100047.8.1
Unique Nameprot_F-distichus_contig100047.8.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length53
Homology
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: F0YLF9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLF9_AURAN)

HSP 1 Score: 89.4 bits (220), Expect = 4.140e-22
Identity = 43/53 (81.13%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 QDVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            +DVR++NI+AAKA+ADAIRTSLGPRGMDKMIQ GDGEV+ITNDGATIL  M+V
Sbjct:   13 KDVRLSNIMAAKAIADAIRTSLGPRGMDKMIQKGDGEVLITNDGATILSTMEV 65          
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: D7FKS7_ECTSI (T-complex protein 1 subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS7_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 7.720e-22
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 QDVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            +DVR ANILAAKAVADAIRTSLGPRGMDKMIQ GDGEVVITNDGATILG MQV
Sbjct:   19 KDVRTANILAAKAVADAIRTSLGPRGMDKMIQGGDGEVVITNDGATILGQMQV 71          
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: A0A3B8M914_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3B8M914_9ACTN)

HSP 1 Score: 85.9 bits (211), Expect = 1.550e-20
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 QDVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            +DVRI+NI+AAK VADAIRTSLGPRGMDKMIQ  DGEV+ITNDGATIL  M V
Sbjct:   32 KDVRISNIMAAKGVADAIRTSLGPRGMDKMIQKSDGEVLITNDGATILTQMNV 84          
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: A0A7R9VTH2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VTH2_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.540e-20
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    2 DVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            DVR+ANI+AAK VADA+RTSLGPRGMDKMIQ   GEV+ITNDGATIL H+QV
Sbjct:    4 DVRMANIIAAKGVADAVRTSLGPRGMDKMIQGETGEVIITNDGATILSHLQV 55          
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: A0A7S1C5Q3_9STRA (T-complex protein 1 subunit delta (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5Q3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.050e-20
Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 QDVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            +DVR +NI+AAK+VADAIRTSLGPRGMDKMIQ+G GEV+ITNDGATIL HMQV
Sbjct:   27 RDVRTSNIIAAKSVADAIRTSLGPRGMDKMIQAGKGEVIITNDGATILSHMQV 79          
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: A0A482SAB4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SAB4_9ARCH)

HSP 1 Score: 86.3 bits (212), Expect = 1.670e-19
Identity = 41/53 (77.36%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 QDVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            +DVR++NI+AAKAVAD +RTSLGPRGMDKMI+ GDGEV+ITNDGATIL  +QV
Sbjct:   13 KDVRMSNIIAAKAVADTVRTSLGPRGMDKMIKRGDGEVLITNDGATILSQLQV 65          
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: A0A835YW20_9STRA (T-complex protein 1 subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW20_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.040e-19
Identity = 42/53 (79.25%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 QDVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            +DVR++NI+AAKAVA+A+RTSLGPRGMDKMIQ GDGEV+ITNDGATIL  M V
Sbjct:   17 RDVRLSNIIAAKAVAEAVRTSLGPRGMDKMIQKGDGEVIITNDGATILSQMNV 69          
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: A0A0E9NQK9_SAICN (T-complex protein 1 subunit delta n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NQK9_SAICN)

HSP 1 Score: 88.2 bits (217), Expect = 4.180e-19
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 QDVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            Q+VR++NI AAKAVADAIRTSLGP+GMDKMIQ+G GEVVITNDGATIL HM V
Sbjct:   24 QEVRLSNITAAKAVADAIRTSLGPKGMDKMIQTGKGEVVITNDGATILKHMAV 76          
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: A0A7S3HSJ9_9STRA (T-complex protein 1 subunit delta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSJ9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.180e-19
Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    2 DVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            DVR++NI+AAK+VADA+RTSLGPRGMDKMIQ GDGEV+ITNDGATIL  +QV
Sbjct:   25 DVRLSNIVAAKSVADAVRTSLGPRGMDKMIQKGDGEVLITNDGATILSQLQV 76          
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Match: A0A6S9KYX5_HETAK (T-complex protein 1 subunit delta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KYX5_HETAK)

HSP 1 Score: 87.8 bits (216), Expect = 5.710e-19
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 QDVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGHMQV 53
            +DVR +NI+AAKAVADAIRTSLGPRGMDKMIQ GDGEV+ITNDGATIL  M+V
Sbjct:   16 KDVRTSNIIAAKAVADAIRTSLGPRGMDKMIQRGDGEVLITNDGATILTEMKV 68          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100047.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0YLF9_AURAN4.140e-2281.13Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
D7FKS7_ECTSI7.720e-2292.45T-complex protein 1 subunit delta n=2 Tax=Ectocarp... [more]
A0A3B8M914_9ACTN1.550e-2081.13Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A7R9VTH2_9STRA2.540e-2080.77Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S1C5Q3_9STRA3.050e-2083.02T-complex protein 1 subunit delta (Fragment) n=1 T... [more]
A0A482SAB4_9ARCH1.670e-1977.36Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A835YW20_9STRA3.040e-1979.25T-complex protein 1 subunit delta n=1 Tax=Tribonem... [more]
A0A0E9NQK9_SAICN4.180e-1983.02T-complex protein 1 subunit delta n=2 Tax=Saitoell... [more]
A0A7S3HSJ9_9STRA4.180e-1980.77T-complex protein 1 subunit delta n=1 Tax=Spumella... [more]
A0A6S9KYX5_HETAK5.710e-1983.02T-complex protein 1 subunit delta n=1 Tax=Heterosi... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 16..32
score: 42.58
coord: 38..53
score: 34.23
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 14..53
e-value: 1.9E-15
score: 56.5
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 1..53
e-value: 1.2E-21
score: 78.9
IPR027413GroEL-like equatorial domain superfamilySUPERFAMILY48592GroEL equatorial domain-likecoord: 2..53
NoneNo IPR availablePANTHERPTHR11353:SF26T-COMPLEX PROTEIN 1 SUBUNIT DELTAcoord: 1..53
NoneNo IPR availablePANTHERPTHR11353CHAPERONINcoord: 1..53
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 19..31

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 16..32
score: 42.58
coord: 38..53
score: 34.23
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 14..53
e-value: 1.9E-15
score: 56.5
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 1..53
e-value: 1.2E-21
score: 78.9
IPR027413GroEL-like equatorial domain superfamilySUPERFAMILY48592GroEL equatorial domain-likecoord: 2..53
NoneNo IPR availablePANTHERPTHR11353:SF26T-COMPLEX PROTEIN 1 SUBUNIT DELTAcoord: 1..53
NoneNo IPR availablePANTHERPTHR11353CHAPERONINcoord: 1..53
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 19..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig100047contigF-distichus_contig100047:362..520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig100047.8.1mRNA_F-distichus_contig100047.8.1Fucus distichus monoicousmRNAF-distichus_contig100047 362..520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig100047.8.1 ID=prot_F-distichus_contig100047.8.1|Name=mRNA_F-distichus_contig100047.8.1|organism=Fucus distichus monoicous|type=polypeptide|length=53bp
QDVRIANILAAKAVADAIRTSLGPRGMDKMIQSGDGEVVITNDGATILGH
MQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR002423Cpn60/TCP-1
IPR027413GROEL-like_equatorial_sf
IPR002194Chaperonin_TCP-1_CS