mRNA_F-distichus_contig98658.19300.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: D7FH71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH71_ECTSI) HSP 1 Score: 142 bits (358), Expect = 9.870e-40 Identity = 84/149 (56.38%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 1 DLSAFLCSDQDASGAGASCVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGARDKSVTLDLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRLAAGQK--------EQPEGTVGSSGSPCCDNGT 423
D + L Q A+ A C+LFLF+ A VDT+ KYA A +GAFCMGFANEMIRY R M + A V D+ TFAFAVQM +AY LMLLVMLYEYV LIMII GL+ GHLVTLRL+AG++ ++ G GSSG+PCC++ T
Sbjct: 57 DGTVMLMGFQAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEMIRYGRDRMAK-ASGVCVGSDVKATFAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKDGAKEASGVAGSSGTPCCNSAT 204
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: D7FWU3_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWU3_ECTSI) HSP 1 Score: 132 bits (333), Expect = 2.790e-36 Identity = 80/150 (53.33%), Postives = 101/150 (67.33%), Query Frame = 1
Query: 1 DLSAFLCSDQDASGAGASCVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGARDKSVTLDLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRLAAGQK---------EQPEGTVGSSGSPCCDNGT 423
D + L Q A+ A +C+LFLF+ A VDT+ KYA A +GAF MGFANEMIRY R M + + D S+ DL T AFAVQ+ +AY LMLLVMLYEYV LIMII GL+ GHL+TLR +AG++ + P +GSSG+PCC+ T
Sbjct: 30 DGTVMLMGFQSATSASVNCILFLFEGAGVDTKTKYAFAALGAFFMGFANEMIRYGRDRMAKTS-DVSLASDLKMTAAFAVQIYLAYMLMLLVMLYEYVILIMIISGLATGHLLTLRWSAGRRRAALRDAGAKTPPEVMGSSGTPCCNTDT 178
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: A9UVZ5_MONBE (Copper transport protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UVZ5_MONBE) HSP 1 Score: 88.2 bits (217), Expect = 5.440e-19 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 55 CVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGARDKSVTLDLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRL 351
C +FLF + V+DT KYAIA+IG FCMG NE+ R++R + + + DL ++ + ML AYFLMLLVMLYE +F +MIILGL+ G V +L
Sbjct: 33 CPIFLFHNVVIDTAGKYAIALIGTFCMGLFNELFRWYRNRLEAQESTRPILQDLCVALSYGIHMLNAYFLMLLVMLYESLFFVMIILGLATGSFVVRQL 131
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: A0A819CUJ2_9BILA (Copper transport protein n=8 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819CUJ2_9BILA) HSP 1 Score: 66.6 bits (161), Expect = 7.290e-11 Identity = 46/134 (34.33%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 55 CVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGARDKSVTL--DLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRLAAGQKEQPEGTVGS----------SGSPCCDNG 420
C++FLF+ VD KYA ++G FCMG N + Y R + R+ S L + + VQ+++AY++MLLVM YE I +ILGL +G+ + + A K +P + S S +PCC+ G
Sbjct: 20 CIVFLFRGWNVDNHVKYAFMILGVFCMGLLNGALAYIRHRINDSYREHSSLLLHQIYLALIYGVQIVLAYWMMLLVMTYESGIFISLILGLVIGYFIFGYIQA--KNRPLNKIISGNNSTYENRFSNTPCCETG 151
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: A0A819B819_9BILA (Copper transport protein n=7 Tax=Adineta steineri TaxID=433720 RepID=A0A819B819_9BILA) HSP 1 Score: 66.6 bits (161), Expect = 8.240e-11 Identity = 47/130 (36.15%), Postives = 70/130 (53.85%), Query Frame = 1
Query: 55 CVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGARDKSVTL--DLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRLAAGQKE----QPEGTVGS-----SGSPCC 411
C+LFLFQ VDT KYA +IG CMG N + Y R + ++ S L + + +A+Q+++AY++MLLVM YE I +I GL +GH + + A + QPE T + + +PCC
Sbjct: 26 CILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYIRHCLVNNSKHTSSLLIHQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLIGGLVLGHFIFGYIEAKNRSSTSIQPETTNTTFQNQFNSTPCC 155
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: A0A835YQY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQY3_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.460e-10 Identity = 45/95 (47.37%), Postives = 58/95 (61.05%), Query Frame = 1
Query: 52 SCVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGARDKSVTLDLMRTFAFAV-QMLIAYFLMLLVMLYEYVFLIMIILGLSVGH 333
SCV++LF A++DTE KYA AVIG F + F NE +R+ R M A + A +V QM+ AY+LMLL MLYE V MI+LGL G+
Sbjct: 49 SCVIWLFPGAILDTEGKYAAAVIGTFLLAFGNEGLRWLRTRMA--AEQAPPXXXXXPSLALSVAQMVNAYWLMLLTMLYESVMFSMIVLGLMAGY 141
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: A0A815NM06_9BILA (Copper transport protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815NM06_9BILA) HSP 1 Score: 66.2 bits (160), Expect = 1.070e-9 Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 1
Query: 55 CVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGARDKSVTL--DLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRLAAGQKE----QPEGTVGS-----SGSPCC 411
C+LFLFQ VDT KYA +IG CMG N + Y R + ++ S + + +A+Q+++AY++MLLVM YE I +I GL +GH + + A + QPE T + + +PCC
Sbjct: 302 CILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYVRHCLVNNSKHTSSLFIHQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLICGLVLGHFIFGYIEAKNRSSTSIQPETTNTTFQNQFNSTPCC 431
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: A0A835YUT5_9STRA (Copper transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT5_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.290e-9 Identity = 47/107 (43.93%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 55 CVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRG-------------ARDKSVTLDLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHL 336
C+++LF+ AV+DT KY AVIG F + FANE IR+ R G A + V L LM F QMLIAY+LML+VM YE I+LGL+ G+L
Sbjct: 44 CIIWLFEGAVLDTAGKYTGAVIGTFLLAFANEGIRWLRSRAMSGKAPFTRCHLSDMPAFARDVVLALMYGF----QMLIAYWLMLIVMTYEVFLFTAILLGLTAGYL 146
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: A0A0L0D9P1_THETB (Copper transport protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9P1_THETB) HSP 1 Score: 63.2 bits (152), Expect = 3.250e-9 Identity = 51/139 (36.69%), Postives = 71/139 (51.08%), Query Frame = 1
Query: 46 GASCVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGARDKSVT----------------------LDLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRLAAGQKEQPEGTVGSS 396
G SC+L+LFQ AVVDT KYA+A IG+F + A ++ R + A +S + LDL FA+QM++AY++MLLVMLYE II+G V L+ +RL +E+ G SS
Sbjct: 26 GNSCILWLFQGAVVDTPGKYALACIGSFSLVLAMVFLQLVRERVSLWASRRSSSXXXXXXXXXXPSLCSGGLPMLGLDLAVAALFALQMVLAYWIMLLVMLYEAWIFTSIIIGFFVSQLLAIRLRRRWRERTCGCPSSS 164
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: A0A819HB45_9BILA (Copper transport protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819HB45_9BILA) HSP 1 Score: 60.8 bits (146), Expect = 1.110e-8 Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 55 CVLFLFQSAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGARDKSVTL--DLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLV 339
C++FLF V+ KYA+ ++G FCMG N + Y R + R+ S L + + +Q+++AY++MLLVM YE I +I GL +G+ +
Sbjct: 20 CIVFLFHGWNVNNHVKYAVMIVGIFCMGLLNGALAYIRHRLNENTRENSSLLLNQIYLALVYGIQIVLAYWIMLLVMTYESGSFISLIFGLVIGYFI 116 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig98658.19300.1 >prot_F-distichus_contig98658.19300.1 ID=prot_F-distichus_contig98658.19300.1|Name=mRNA_F-distichus_contig98658.19300.1|organism=Fucus distichus monoicous|type=polypeptide|length=99bp MGFANEMIRYWRGVMGRGARDKSVTLDLMRTFAFAVQMLIAYFLMLLVMLback to top mRNA from alignment at F-distichus_contig98658:189..1887+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig98658.19300.1 ID=mRNA_F-distichus_contig98658.19300.1|Name=mRNA_F-distichus_contig98658.19300.1|organism=Fucus distichus monoicous|type=mRNA|length=1699bp|location=Sequence derived from alignment at F-distichus_contig98658:189..1887+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig98658:189..1887+ >mRNA_F-distichus_contig98658.19300.1 ID=mRNA_F-distichus_contig98658.19300.1|Name=mRNA_F-distichus_contig98658.19300.1|organism=Fucus distichus monoicous|type=CDS|length=594bp|location=Sequence derived from alignment at F-distichus_contig98658:189..1887+ (Fucus distichus monoicous)back to top |