prot_F-distichus_contig98658.19300.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig98658.19300.1
Unique Nameprot_F-distichus_contig98658.19300.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length99
Homology
[Close]
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: D7FH71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH71_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 3.180e-24
Identity = 62/105 (59.05%), Postives = 74/105 (70.48%), Query Frame = 0 
Query:    1 MGFANEMIRYWRGVMGRGARDKSVTLDLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRLAAGQK--------EQPEGTVGSSGSPCCDNGT 97
            MGFANEMIRY R  M + A    V  D+  TFAFAVQM +AY LMLLVMLYEYV LIMII GL+ GHLVTLRL+AG++        ++  G  GSSG+PCC++ T
Sbjct:  101 MGFANEMIRYGRDRMAK-ASGVCVGSDVKATFAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKDGAKEASGVAGSSGTPCCNSAT 204
[Close]
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: D7FWU3_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWU3_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 8.640e-22
Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 0 
Query:    1 MGFANEMIRYWRGVMGRGARDKSVTLDLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRLAAGQK---------EQPEGTVGSSGSPCCDNGT 97
            MGFANEMIRY R  M + + D S+  DL  T AFAVQ+ +AY LMLLVMLYEYV LIMII GL+ GHL+TLR +AG++         + P   +GSSG+PCC+  T
Sbjct:   74 MGFANEMIRYGRDRMAKTS-DVSLASDLKMTAAFAVQIYLAYMLMLLVMLYEYVILIMIISGLATGHLLTLRWSAGRRRAALRDAGAKTPPEVMGSSGTPCCNTDT 178
[Close]
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Match: A9UVZ5_MONBE (Copper transport protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UVZ5_MONBE)

HSP 1 Score: 52.4 bits (124), Expect = 3.840e-6
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:    1 MGFANEMIRYWRGVMGRGARDKSVTLDLMRTFAFAVQMLIAYFLMLLVMLYEYVFLIMIILGLSVGHLVTLRL 73
            MG  NE+ R++R  +      + +  DL    ++ + ML AYFLMLLVMLYE +F +MIILGL+ G  V  +L
Sbjct:   59 MGLFNELFRWYRNRLEAQESTRPILQDLCVALSYGIHMLNAYFLMLLVMLYESLFFVMIILGLATGSFVVRQL 131
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98658.19300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH71_ECTSI3.180e-2459.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWU3_ECTSI8.640e-2255.66Copper transport protein n=2 Tax=Ectocarpus TaxID=... [more]
A9UVZ5_MONBE3.840e-643.84Copper transport protein n=1 Tax=Monosiga brevicol... [more]
back to top
InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 23..69
e-value: 5.6E-10
score: 40.0
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 2..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 23..69
e-value: 5.6E-10
score: 40.0
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 2..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98658contigF-distichus_contig98658:321..1824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98658.19300.1mRNA_F-distichus_contig98658.19300.1Fucus distichus monoicousmRNAF-distichus_contig98658 189..1887 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig98658.19300.1 ID=prot_F-distichus_contig98658.19300.1|Name=mRNA_F-distichus_contig98658.19300.1|organism=Fucus distichus monoicous|type=polypeptide|length=99bp
MGFANEMIRYWRGVMGRGARDKSVTLDLMRTFAFAVQMLIAYFLMLLVML
YEYVFLIMIILGLSVGHLVTLRLAAGQKEQPEGTVGSSGSPCCDNGTA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter