mRNA_F-distichus_contig104686.414.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: D8LQ23_ECTSI (Exostosin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ23_ECTSI) HSP 1 Score: 276 bits (705), Expect = 3.420e-83 Identity = 133/211 (63.03%), Postives = 156/211 (73.93%), Query Frame = 1
Query: 1 RVNVYVYDD-PALDFSDLIDCYRE-RHGKSPWQDERADMAQDMGEIWLHRAMLDHPWRVLEPDKADVFYVPMYPVLSYKLMLGPDAKKCRGLTHIQRIKNAVLYLQNRSVYFQRFGGGDHVIVCAWWNCRSVFTPWQRMLLRRAVLGINERRKWWANWGCG-GRSITIPYTASSIITTPELFGGADPESRDIPFFFVGSTRKRPERENLKV 624
+V+V+VYD P LD S L+ CYR+ R G SPWQDERADMAQDMGEIWLHRAML HPWRV P++AD+FYVPMYPVLS KL +C G TH + I +V YL SVYF+RFGG DH +VCAWWNC+S P RMLLRR V+GINE+ W WGCG + +TIPYTASS++TT E+ GG E RDIPFFFVG+ R RPER+NL V
Sbjct: 156 KVSVFVYDGVPELDHSWLVPCYRQVRDGVSPWQDERADMAQDMGEIWLHRAMLAHPWRVANPEEADLFYVPMYPVLSTKL----GNNRCGGKTHDELINTSVEYLALSSVYFRRFGGADHTLVCAWWNCKSALGPKPRMLLRRTVVGINEKMLEWTRWGCGLDKMVTIPYTASSVLTTSEMIGGRAAEDRDIPFFFVGTARGRPERQNLDV 362
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: A0A6H5KWD0_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD0_9PHAE) HSP 1 Score: 202 bits (515), Expect = 2.950e-61 Identity = 90/160 (56.25%), Postives = 116/160 (72.50%), Query Frame = 1
Query: 148 MLDHPWRVLEPDKADVFYVPMYPVLSYKLMLGPDAKKCRGLTHIQRIKNAVLYLQNRSVYFQRFGGGDHVIVCAWWNCRSVFTPWQRMLLRRAVLGINERRKWWANWGCG-GRSITIPYTASSIITTPELFGGADPESRDIPFFFVGSTRKRPERENLKV 624
ML HPWRVL+P++AD+FYVP+YPVLS+KL +C GLTH + + +V YL + S +F RFGG DH+++CAWW C P RMLLRRAV+GINER W WGCG + +T+PYTA+S++TT ++ GG E RDIPFFFVG+ R RPER+NL V
Sbjct: 1 MLSHPWRVLDPEEADLFYVPIYPVLSFKLATS----RCGGLTHNELMDASVEYLSSSSPFFNRFGGADHILMCAWWKCGEALGPKHRMLLRRAVVGINERLLRWTRWGCGRSKMVTVPYTANSVLTTSDMIGGRTAEDRDIPFFFVGTARHRPERKNLDV 156
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: A0A6H5LR87_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LR87_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.770e-59 Identity = 90/165 (54.55%), Postives = 116/165 (70.30%), Query Frame = 1
Query: 148 MLDHPWRVLEPDKADVFYVPMYPVLSYKLMLGPDA-----KKCRGLTHIQRIKNAVLYLQNRSVYFQRFGGGDHVIVCAWWNCRSVFTPWQRMLLRRAVLGINERRKWWANWGCGGRS-ITIPYTASSIITTPELFGGADPESRDIPFFFVGSTRKRPERENLKV 624
ML HPWRVL+P++AD+FYVP+Y LS KL ++C GLTH + + +V YL + S++F RFGG DH+++CAWW CR+ P RMLLRR V+GINER W WGCG R +T+PYTASS++ T ++ GG E+RDIPFFFVG+ R RPERENL V
Sbjct: 1 MLFHPWRVLDPEEADLFYVPIYSALSSKLTEHSTIHLELRRRCGGLTHDELMDASVEYLSSSSLFFNRFGGADHILMCAWWGCRNGLGPKHRMLLRRTVVGINERVFKWTRWGCGPRKMVTVPYTASSVLATSDMIGGRTAEARDIPFFFVGTARGRPERENLDV 165
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: A0A6H5JMN7_9PHAE (Exostosin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMN7_9PHAE) HSP 1 Score: 159 bits (402), Expect = 5.910e-42 Identity = 71/124 (57.26%), Postives = 90/124 (72.58%), Query Frame = 1
Query: 256 KCRGLTHIQRIKNAVLYLQNRSVYFQRFGGGDHVIVCAWWNCRSVFTPWQRMLLRRAVLGINERRKWWANWGCGGRS-ITIPYTASSIITTPELFGGADPESRDIPFFFVGSTRKRPERENLKV 624
+C GLTH + + +V YL + S++F RFGG DHV++CAWW CR+ P RMLLRR V+GINER W WGCG R +T+PYTASS++ T ++ GG E+RDIPFFFVG+ R RPERENL V
Sbjct: 5 QCGGLTHDELMDASVDYLSSSSLFFNRFGGADHVLMCAWWGCRNGLGPKHRMLLRRTVVGINERVFLWTRWGCGPRKMVTVPYTASSVLATSDMIGGRTAEARDIPFFFVGTARGRPERENLDV 128
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: A0A6H5KVI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI3_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 1.290e-12 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 1
Query: 1 RVNVYVYDD-PALDFSDLIDCYRERHGKSPWQDERADMAQDMGEIWLHRA 147
RV V+VY+ P LD +L+ CYR+ HG +PWQDER DMAQDMGEIW+HR+
Sbjct: 155 RVAVFVYEGVPELDHMELVQCYRDVHGVAPWQDERFDMAQDMGEIWMHRS 204
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: A0A8J6CHB5_DIALT (Exostosin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHB5_DIALT) HSP 1 Score: 72.8 bits (177), Expect = 1.900e-11 Identity = 59/196 (30.10%), Postives = 92/196 (46.94%), Query Frame = 1
Query: 13 YVYDDPALDFSDLIDCYRERHGKSPWQ-DERADMAQDMGEIWLHRAMLDHPWRVLEPDKADVFYVPMYPVLSYKLMLGPDAKKCRGLTHIQRIKNAVLYLQNRSVYFQRFGGGDHVIVCAWWNCRSVFTPWQRMLLRRAVLGINERRKWWANWGCGGRSITIPYTASSIITTPELFGGADPESRDIPFFFVGSTRK 597
+VY A +FS+L+ C+ +RH PW DE M EIW + ++ HP RV + A++F VP++P+LS KL+ C TH +R++ A L+ S ++QR G H +V A +S R LR +++ E +WG G T ++ T G E R + F V T++
Sbjct: 59 FVYAHGAFNFSNLLGCFHKRHSCEPWACDEHPGMDHVAPEIWATQFLMHHPARVSQAMDAEIFLVPVWPLLS-KLV----GNACGQGTHDERMRKANAALRG-SAHWQRVPG-RHFVVAAGPRAQSALGDELRRSLRGSMIANEE------SWG--GLDWTSEPDTTAPAFTLRAADGEPGEGRMVDFQDVWGTQR 239
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: A0A6H5L8I0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8I0_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 3.270e-9 Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 1 RVNVYVYDD-PALDFSDLIDCYRERH-GKSPWQDERADMAQDMGEIWLHR 144
+V ++VY+ P LD ++L+ CYR H G +PWQDER DMA++MGEIW+HR
Sbjct: 145 KVAIFVYEGVPELDHTELVQCYRSGHRGVAPWQDERNDMAENMGEIWMHR 194
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: A0A7S2LEY5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LEY5_9DINO) HSP 1 Score: 62.4 bits (150), Expect = 4.490e-8 Identity = 44/172 (25.58%), Postives = 77/172 (44.77%), Query Frame = 1
Query: 127 EIWLHRAMLDHPWRVLEPDKADVFYVPMYPVLSYKL-MLGPDAKKCRGLTHIQRIKNAVLY-----LQNRSVYFQRFGGGDHVIVCAWWNCRSVFTPWQRMLLRRAVLGINERRKWWANWGCGGRS-ITIPYTASSIITTPELFGGADPESRDIPFFFVGSTRKRPERENLK 621
+ W +A L HPWRV +P++AD+F VP +L++ + + ++C + + NA L+ + +S +F+R+GG DHV VC+ + C W+ + + + G R I Y + + P G + +R F V S PER + +
Sbjct: 107 DYWFLKAALHHPWRVSDPEEADLFVVPA--LLNFPMEQISFSRRQCC----VGDLCNAELFRYTDTMLAQSPWFKRYGGKDHVAVCSHYGCPGQLALWRNIQACNTISFEENSMR-------GDRCRIATTYVGRACVGAPSEHGNSTAIARQDTFVMVASMH--PERPSFR 263
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: A0A7S3ZW87_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW87_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 5.450e-7 Identity = 45/174 (25.86%), Postives = 75/174 (43.10%), Query Frame = 1
Query: 85 PWQDERADMAQDMGEIWLHRAMLDHPWRVLEPDKADVFYVPMYPVLSYKLMLGPDAKKCRGLTHIQRIKNAVLYLQNRSVYFQRFGGGDHVIVCAWWN---CRSVFTPWQRMLLRRAVLGINERRKWWANWGCGGRSITIPYTASSIITTPELFGGADP-ESRDIPFFFVGSTR 594
P Q +A+++ E+W+HRA+L+ R +P+ A +F+VP Y LS K G H +R+ + L++ S +FQR G DHV + N R + P L ++ G+ E W ++ A ++ L G + + +I FF R
Sbjct: 71 PQQRRHYKIAEELVEVWVHRALLNDKRRTTDPEAASLFFVPAYLSLS---------KNSDGQGHDERLSALIEELRS-SKWFQRHRGADHVFGYSSINPGVARQLLFPKLHAGLEQSYFGVFEMNPAWVGGDRKEETLRRMVPAPYVVDASRLAGTSTQLHNHEISVFFAAHRR 234
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Match: A0A7J7L4N1_9MAGN (Exostosin domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7L4N1_9MAGN) HSP 1 Score: 57.0 bits (136), Expect = 4.810e-6 Identity = 57/222 (25.68%), Postives = 97/222 (43.69%), Query Frame = 1
Query: 4 VNVYVYDDPALDFSDLIDCYRERHGKSPWQDERADMAQDMGEIWLHRAMLDHPW---------RVLEPDKADVFYVPMYPVLSYKLM------LGPDAKKCRGLTHIQRIKNAVLYLQNRSVYFQRFGGGDHVIVCAWWNCRSVFTPWQRMLLRRAVLGINERRKWWANWGCGGRSITIPYTASSIITTPELFGGADPESRDIPFFFVGSTRKRPERENLKV 624
V VY+YD P +ID Y G D + Q E +L + ++D RVL+PD+AD+FYVP + LS + +G RG+ + ++ +++ VY++R G DHV +C + +++ R+ + VL +++ + + + + +PY S P G E RD FF+G+ R +E KV
Sbjct: 75 VRVYLYDLPKKFTFGVIDSYLSARGSGVDGDLKYPGNQHSAEWYLFKDLIDERSKGVRGKSIVRVLDPDEADLFYVPFFSSLSLVVNPIRPAGVGGIGGGGRGVYSDEEMQESLIEWLEGQVYWRRNNGWDHVFICQ--DPNALYKVIDRV--KNGVLLVSDFGRLRGDQASLVKDVILPY---SHRINP-FKGDVGIEGRDSLLFFMGN---RYRKEGGKV 285 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig104686.414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig104686.414.1 >prot_F-distichus_contig104686.414.1 ID=prot_F-distichus_contig104686.414.1|Name=mRNA_F-distichus_contig104686.414.1|organism=Fucus distichus monoicous|type=polypeptide|length=208bp RVNVYVYDDPALDFSDLIDCYRERHGKSPWQDERADMAQDMGEIWLHRAMback to top mRNA from alignment at F-distichus_contig104686:806..1429- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig104686.414.1 ID=mRNA_F-distichus_contig104686.414.1|Name=mRNA_F-distichus_contig104686.414.1|organism=Fucus distichus monoicous|type=mRNA|length=624bp|location=Sequence derived from alignment at F-distichus_contig104686:806..1429- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig104686:806..1429- >mRNA_F-distichus_contig104686.414.1 ID=mRNA_F-distichus_contig104686.414.1|Name=mRNA_F-distichus_contig104686.414.1|organism=Fucus distichus monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at F-distichus_contig104686:806..1429- (Fucus distichus monoicous)back to top |