mRNA_F-distichus_contig102729.239.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig102729.239.1
Unique NamemRNA_F-distichus_contig102729.239.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 268 bits (685), Expect = 3.850e-76
Identity = 155/487 (31.83%), Postives = 260/487 (53.39%), Query Frame = 1
Query:    1 DEPTTLHEAKVSSEWPQWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISY---------------------YLDDA--------------------------------EITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFMVPPIDT-NICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVDGGIVR 1299
            D+PTT+ E K  S+   W+ ++  E   Q+  G W++VD P  K  L +K VF+ K D  G++ K+K R V +G  + KG+ ++ + SP    SSIR  LA  A  D    Q+D   AFL+ D+TEE+Y+  P+ Y++S  +V RL+K++YGLK A  +W+ K+       G  +S+ DPC++ +  + K+V  +AV+VD LL+ S+ K+   +    L   F + D+GE  +                     Y+D+                                 E  +M  IPY+EAVG+L++ + +  PD+A+    +++F  N GP HW AV + L+Y+K T+   + Y G TK   ++ + D+D AS  D R+SV+G   ++  G++SW ++ Q  TA +T+E++Y+AL+    E  +LR +   +VPP +   + +  DN+G + +A N     RT+HIDV+HH +R+ +   +++
Sbjct:  838 DDPTTVEEIKTRSDRDLWKQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQESG-KVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYKSSQKKMV-FVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDG-TKSSEITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERIPLRIFVDNQGALNLAQNGSYQSRTKHIDVRHHFLREKISEKLIK 1321          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 261 bits (667), Expect = 1.180e-73
Identity = 161/488 (32.99%), Postives = 256/488 (52.46%), Query Frame = 1
Query:    1 DEPTTLHEAKVSSEWPQWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGE-------------------IS-----------YYLDDAEITEMRGIP--------------------YREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*----LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFMVPPIDTNICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVDGGIVRV 1302
            DEP +L EA+ S EWP+W  ++K E D     G W++ D PK +  +G K VF+RK +++G+V KYK R VA+G+ +I G+ +  + +P     SIR  LA   + +W   Q+DV+ A+L  D+ EE+Y+  P+ + D   ++ RL+K +YGLK +G  W++K+  E    G++R +ADPCV+  + +   V II V+VD LL+ + + +   +   DL+  F + DLGE                   IS           Y L++A    M   P                    Y   VG+LM+ A  T PD++Y   TL+K+     P HW A  + L+YL  T  L +TY     D      +  + D D+AS  D R+SVSG    LG GA++W S+ Q  TAT+++E++Y ALA    +  +LR + A +    +    ++ DN+  I +A +     R++H DV++H VR+ V+ GI+++
Sbjct:  905 DEPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAVGMPLDPNVAFTAEDENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRYLAGTRDLHITYTRRDSDAPNGNIIGGYTDTDYASDHD-RKSVSGHVFYLGGGAVAWSSKKQTTTATSSTEAEYTALAHATRQAIWLRNLLAELGFAQEEPTEIYCDNQAAIAIARDPQYHARSKHFDVQNHFVREKVENGIIQL 1391          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: W8BNV5_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BNV5_CERCA)

HSP 1 Score: 249 bits (636), Expect = 7.580e-73
Identity = 154/496 (31.05%), Postives = 256/496 (51.61%), Query Frame = 1
Query:    4 EPTTLHEAKVSSEWPQWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLP----------DAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYLD-----------------------------------------------------DAEITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFMVPPIDTNICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVDGGIVRV 1302
            +P T  +A  S E  +W+ ++ +E    IA   W++VDRP  K ++ +K   + K +Q+G +EK K R VA+GF +  GI Y  + +P    ++IR+ +A  A +     QLD   A+L   +  E+Y+ LP          +A + +  +V  L+KA+YGLK +G LW +K+  +    G   S++DPC++   +    +++IA+YVD L+V    KQ   +  ++L SSF ++DLG I   L                                                      + E      +PY+  VG+LM++A  T PD+A+I   L++F  N G +HW A  + L+YLK T +LG+++   T++  L  + DAD  S+ D RRS +G A  L   AISW SR QR  A +++ES+Y++L++   E  +L+++   ++   D  I ++ DN+G  K++ N     RT+H+D++HH VR+AVD   ++V
Sbjct:   89 DPETSAQALTSPEASEWKKAMLKEYRTLIANNTWEIVDRPIGKKIVESKWALRTKYNQNGNIEKRKARLVAKGFTQRAGIDYSETFAPVARLNTIRLLMAISAEMGLEIHQLDFVSAYLNGTIETEIYMKLPTDLFSILDEEEASQYTEDKVCLLKKAIYGLKQSGRLWYQKLHTKLSNMGMSASKSDPCLYTYNNNN-TIILIAIYVDDLIVACNDKQKLSRIKDELASSFEMKDLGPIKLCLGIEFNQCLKTNTITMCQSRYVAEILNRFQMNDCKPVSTPANTSIKLCKEMCPKTEEEKLSASKLPYQNLVGSLMYLAVSTRPDIAHIVSVLSQFNTNYGNQHWVAAKRVLRYLKGTPNLGISFT-RTRNFSLEGFADADWGSNIDDRRSYTGFAFTLANAAISWESRKQRTVAISSTESEYMSLSDSTKEAIYLKRLLREIIGE-DRTITIYNDNQGAGKLSKNPIFHNRTKHVDIRHHFVREAVDRKDIKV 581          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 258 bits (660), Expect = 9.470e-73
Identity = 142/486 (29.22%), Postives = 258/486 (53.09%), Query Frame = 1
Query:    1 DEPTTLHEAKVSSEWPQWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGE-------------------------ISYYLDDAEITEMRGIP--------------------------YREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLK--RTASLGVTYGGATK-DM*LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFMVPPIDTNICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVDGGIV 1296
            D P TL +A+ S EW  W+ +++ E    +  G W++ +  + + ++G++ VF +K D+ G+V +YK R VA+GF +I G+ Y  + SP     ++R  +A  A+ DW  RQ+D++ A+L  ++ EE+++  P+ + D   +V RL+  +YGLK AG +W+KK+  +    GF R+ ADPCV+     GK+  I+ V+VD +++  +++      +  L+  F ++DLGE                         I+  L+    +++  IP                          Y+  +G++M+ +  T P LAY   TL++F  N G EH  A+ +  +YL   R   +G+ YGG  +  + +  + DAD AS+P+ R+S+SG   +LG GAISW S+ Q   A +++E++Y+A         +L+++   +   +  ++ +  DN+ TI ++ +    +RT+HID+++H +R+ V  GI+
Sbjct:  853 DVPKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSKINPIPIPLDPNVTLRKRDDEITPPEKHLVKEYQTKLGSIMYASIGTMPQLAYAVQTLSQFSSNPGAEHMSALKRVFKYLAHARDHEVGIVYGGTRQWPVDIIGYTDADWASNPNDRKSISGYVFLLGGGAISWSSKKQTTVALSSTEAEYMAATHAARHAIWLQRLFQDIGIQLPDSMALFIDNQSTISISNDVMFHQRTKHIDIQYHFIRNLVIDGII 1337          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI)

HSP 1 Score: 258 bits (659), Expect = 1.130e-72
Identity = 155/482 (32.16%), Postives = 247/482 (51.24%), Query Frame = 1
Query:   22 EAKVSSEWPQWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPD--AYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLV-------LSETKQ---------------------------------DEHQALEDLRSSFPIRDLGEISYYLDD-------------AEITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFMVPPIDTNICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVDGGIVRV 1302
            EAK   +WP+W+ ++K E+D  +A G W++V RP    V+ +K V + K +  G ++KYK R VA GF ++ G+ Y  + +P    SSIR+ LA  A   W     D   A+L + + E++Y+  P   A+ D    V +L+KA+YGLK  G  W + +       GF R +AD  VF  KH G+ ++++AV+VD  L+       L +TK                                   +H  +E L + F   DL  +S  +D              AE+  MR +PYREA+GALM+ A  T PD+A+   TLA+F  N G  HW AV +  +YL  T +L + YGG  ++  L  + +AD A+  + RR+++G   ++  GA+SW S+ Q +   +T+ES+YVA      E  +LR++   +  P+     ++ DN+  I +  +     RT+HIDV++H +R  +D G +R+
Sbjct:  803 EAKKRPDWPKWQEAIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFY-KHEGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQQRE--LEGYVNADGATQ-EHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFGPLSNATMLYSDNQAAIALTKDGSYHARTKHIDVRYHFIRYYIDAGSIRL 1280          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A6A3K5Y5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K5Y5_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.290e-72
Identity = 143/464 (30.82%), Postives = 247/464 (53.23%), Query Frame = 1
Query:    1 DEPTTLHEAKVSSEWPQWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYLD------------------------------DAEITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFMVPPIDTNICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVDGGIVRV 1302
            D PTT  +A  + +  QWR ++  E+      G W +V R      +G + VF +K DQ GRV +YK R V +GF++  GI +  + SP    +SIR+ L+  A  ++   QLD + AFL + + + +Y+ +P    ++     +L KA+YG + A   W+K +   F+  GF+   AD CV+ ++ +   + +  +Y D +++ ++T +D  +  + L+++F +++LG   + L                               DAE   MR  PYR  +G L+++   T PD+A++   L++F +N G +HW A ++ L+YLK T   G+ Y G T  + L A+ DAD  ++ D RRSVSG  VM+G   + + S+ QR  A +++E++Y+AL+  V E+ + R V   +         + EDN+G I +A N     RT+H+D++HH +++ V+ G V+V
Sbjct:  722 DIPTTHAQAMANDDAAQWREAMDAELLSHERNGTWTLVPRGTANRTIGCRWVFAKKRDQYGRVVRYKARLVTKGFKQKYGIDFFETYSPVANMNSIRVVLSVCAAYEYRMEQLDSDTAFLNSGLKDRVYMEVPFGIENARDYQCQLNKAIYGSEQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYV-CLYDDDMIIAAKTSEDIREVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKSSRHAGLKLSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTHPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLKSTRQHGIIYQGGTHSVTLKAYSDADWGTNLDDRRSVSGVMVMIGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRVVLTDIGTLQRNASRIWEDNQGAIALAQNAGYHARTKHVDIRHHFIKENVERGTVKV 1184          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: H3GJA9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJA9_PHYRM)

HSP 1 Score: 255 bits (652), Expect = 7.680e-72
Identity = 159/443 (35.89%), Postives = 233/443 (52.60%), Query Frame = 1
Query:   49 QWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRD--SPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYL--------DDAEITEMRGI-----------------PYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFMVPPIDTNICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVDGGIV 1296
            +W  +++ +M        WK+VD P  K  +G K VF+ K D  G++ K+K R VA+GF +  G+ Y  + +P   + SI  A+A  A  D     +DV+ AFL  DV EELY+  PD + D  +P +   L +A+YG K A   W+ K+      +GF RS ADPCV+ R+   K  +II VYVD L++ S TK +  +  + L+  F I++LGE+ Y L        DD  I   +                   PYRE VGALM++A  T PD+A     +AKF +     HW A  + L+YLK T  LG+ + G TK   L  + DA+ A   DTRRS +G    L   AISW S+ Q   AT+++E++Y+AL     E  +LRQ+           + V  DN+G I +A N     RT+HID+K+H +R+ V+  ++
Sbjct:  799 EWLRAMESKMKSLEDHRTWKLVDMPSDKKAIGCKWVFRIKRDPSGKIIKFKARLVAKGFTQCPGVDYTETFAPVARKESINTAVAIAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCLLVQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSKFSIII-VYVDDLMIFSRTKAEIGEIKKPLKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRANSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCEWYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLL----------LDVGWDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVI 1229          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A6A3JPU3_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JPU3_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.190e-71
Identity = 144/465 (30.97%), Postives = 248/465 (53.33%), Query Frame = 1
Query:    1 DEPTTLHEAKVSSEWPQWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISY---------------------YLDDA----------EITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFMVPPIDTNICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVDGGIVRV 1302
            D PTT  +A  S +  QWR ++  E+      G W +V R      +G + VF +K DQ GRV +YK R VA+GF++  GI +  + SP    +SIR+ ++  A  ++   QLD + AFL +++ + +Y+ +P    ++     +L KA+YGLK A   W+K +   F+  GF+   AD CV+ ++ +   + +  +YVD +++ ++T +D  +  + L+++  +++LG   +                     Y+DD           E  + R    R  +G L+++   T PD+A++   L++F +N G +HW A ++ L+YLK T   G+ Y G T  + L A+ DAD  ++ D RRSVSG  VM+G   + + S+ QR  A +++E++Y+AL+  V E+ + R +   M         + EDN+G I +A N     RT+H+D++HH +R+ V  G V+V
Sbjct:  278 DIPTTHAQAMASDDAAQWREAMDAELLSHERNGTWTLVPRGTANRTIG-RWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNSIRVVVSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARDYQCQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYV-CLYVDDMIIAAKTSEDIREVKDALKNALKMKELGPAKFIVGMEIDHDMTAGTLKIKQTRYIDDLASSCRRRSRQERMQSRTQCGRNLIGCLLYITTCTRPDIAFVVTQLSRFLENPGQQHWNAAVRVLRYLKSTRQHGIIYQGGTHSVTLKAYSDADWGTNLDDRRSVSGVMVMIGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTDMGTLQRNATTIWEDNQGAIALAQNAGYHARTKHVDIRHHFIRENVKRGTVKV 740          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A4Z0A072_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A072_9AGAM)

HSP 1 Score: 249 bits (635), Expect = 4.360e-71
Identity = 150/467 (32.12%), Postives = 238/467 (50.96%), Query Frame = 1
Query:    4 EPTTLHEAKVSSEWPQWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQ---VGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYL--------------------DDA-----------------EITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFMVPPIDTNICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVD 1284
            EP T++E +  +EWP+W  +++ E+      G WK+V++P    ++G+K VFK K D  G + KYK R +A+GF +I G+ +  + +     SSIR+ +   A  +W   Q+DV+ A+L  D+ EE+Y+  P  +  +P Q   V  L K +YGLK AG  W KK+   F+  GF RS  D  VF R   G  +V+I V VD L + + +        + L + F + DLG++ + L                    D A                 +  EM  +PYREA+G+LM+ A  T PD+ Y   TL++F  N G  HW+   + L YLK T    +TYGG  K   +  + D D  S  D R S+SG   ++   A+SW S+ Q I A +++E++YV +     E  +++     M+ P D    +H DN+  + +A +     RT+HI +++H +RD ++
Sbjct:  344 EPRTVNEVRAGAEWPKWEEAIEDELARMEKMGTWKLVEKPDCVNIVGSKWVFKIKCDAAGAIIKYKARLMAQGFSQIPGVDFTDTFALVAKLSSIRILVVLAARFNWELHQMDVKNAYLNGDLDEEIYMKQPPGF-PAPGQEHKVCALFKPIYGLKQAGRRWYKKLCAAFLGMGFTRSSVDHSVFFRHGAGSEIVLITVSVDDLTIAATSVNAITDVKDALNARFEMTDLGKMHWLLGIKIKHDRGGGGRSRCRSPLDTALDPSFQLTTAQSPSTPQQYEEMCNVPYREAIGSLMYAALGTRPDIVYAVTTLSQFMQNPGRMHWEGTKRVLHYLKATKEEWLTYGGDAKTG-IMGYSDTDWGSS-DHRHSISGYVFLVDGRAVSWSSKKQPIVALSSTEAEYVVMTHATKEAVWMQAFLGEMLTPFDMPTPLHCDNQSAMMLAKDNIFHLRTKHIAIRYHFIRDVIE 807          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 249 bits (637), Expect = 4.750e-70
Identity = 160/482 (33.20%), Postives = 248/482 (51.45%), Query Frame = 1
Query:    1 DEPTTLHEAKVSSEWPQWRGSLKREMDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYL-------------------------------------------------DDAEITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*-LSAWWDADHASHPDTRRSVSGGAVMLGVGAISWFSRTQRITATATSESKYVALAEIVNELRFLRQVKAFM--VPPIDTNICVHEDNEGTIKMAGNRFSSRRTRHIDVKHHMVRDAVDGG 1290
            DEP T  EA    +  +W+ +   E+   +   ++  V+RP+ + V+  K VFK K   DG +EKYK R VA+GF +++G+ +  + +P    +S+R  LA  A LD    Q+DV+ AFL  D+ EE+Y+ +P  +R S   + +L KA+YGLK AG  W KK+  EF A GF R  +D  VF +   G +++IIA+YVD +L+LS+         EDL+S F + DLGE  + L                                                  +AEI      PY+ A+G+LM+    T PDLA+    L++     G EHW A+M+  +YL+ TA   + Y G TK+   L  + DAD A++ + RRSV+G   ++  GA+SW S+ Q  TA +++E++Y+A A    E  +LR   + +  V    T + +  DN+  I ++ N     RT+HI V++H +R+  D G
Sbjct:  601 DEPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGMANCRPVSTPMAQNQKLVKLSEAEIDPK---PYQSALGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKKPLLRYVDADWAANVNNRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRAFLSEIGQVQKGPTPLLI--DNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSG 1076          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A9Z683_LYGHE3.850e-7631.83Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GYH9_9APHY1.180e-7332.99Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
W8BNV5_CERCA7.580e-7331.05Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C3AKI0_9AGAM9.470e-7329.22Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A060SPD4_PYCCI1.130e-7232.16Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3K5Y5_9STRA3.290e-7230.82Uncharacterized protein n=4 Tax=Phytophthora rubi ... [more]
H3GJA9_PHYRM7.680e-7235.89Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3JPU3_9STRA1.190e-7130.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Z0A072_9AGAM4.360e-7132.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H123_9APHY4.750e-7033.20Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102729contigF-distichus_contig102729:343..1799 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score176.4
Seed ortholog evalue1.9e-41
Seed eggNOG ortholog164328.Phyra71619
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3QHW0@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1302
Cds size864
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102729.239.1prot_F-distichus_contig102729.239.1Fucus distichus monoicouspolypeptideF-distichus_contig102729 418..1436 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928944.1903517-UTR-F-distichus_contig102729:342..4171622928944.1903517-UTR-F-distichus_contig102729:342..417Fucus distichus monoicousUTRF-distichus_contig102729 343..417 +
1690885076.4920125-UTR-F-distichus_contig102729:342..4171690885076.4920125-UTR-F-distichus_contig102729:342..417Fucus distichus monoicousUTRF-distichus_contig102729 343..417 +
1622928944.2358358-UTR-F-distichus_contig102729:1436..17991622928944.2358358-UTR-F-distichus_contig102729:1436..1799Fucus distichus monoicousUTRF-distichus_contig102729 1437..1799 +
1690885076.522573-UTR-F-distichus_contig102729:1436..17991690885076.522573-UTR-F-distichus_contig102729:1436..1799Fucus distichus monoicousUTRF-distichus_contig102729 1437..1799 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928944.205163-CDS-F-distichus_contig102729:417..10481622928944.205163-CDS-F-distichus_contig102729:417..1048Fucus distichus monoicousCDSF-distichus_contig102729 418..1048 +
1690885076.5036805-CDS-F-distichus_contig102729:417..10481690885076.5036805-CDS-F-distichus_contig102729:417..1048Fucus distichus monoicousCDSF-distichus_contig102729 418..1048 +
1622928944.2212443-CDS-F-distichus_contig102729:1203..14361622928944.2212443-CDS-F-distichus_contig102729:1203..1436Fucus distichus monoicousCDSF-distichus_contig102729 1204..1436 +
1690885076.5123267-CDS-F-distichus_contig102729:1203..14361690885076.5123267-CDS-F-distichus_contig102729:1203..1436Fucus distichus monoicousCDSF-distichus_contig102729 1204..1436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig102729.239.1

>prot_F-distichus_contig102729.239.1 ID=prot_F-distichus_contig102729.239.1|Name=mRNA_F-distichus_contig102729.239.1|organism=Fucus distichus monoicous|type=polypeptide|length=288bp
MDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGF
REIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVT
EELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFER
SQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPI
RDLGEISYYLDDAEITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAK
FGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*
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mRNA from alignment at F-distichus_contig102729:343..1799+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig102729.239.1 ID=mRNA_F-distichus_contig102729.239.1|Name=mRNA_F-distichus_contig102729.239.1|organism=Fucus distichus monoicous|type=mRNA|length=1457bp|location=Sequence derived from alignment at F-distichus_contig102729:343..1799+ (Fucus distichus monoicous)
GATGAACCCACCACCCTGCACGAAGCGAAGGTGTCCTCCGAGTGGCCGCA ATGGCGCGGCTCGCTCAAGCGCGAGATGGACGGCCAGATTGCGCGTGGTG TGTGGAAGGTCGTCGATCGACCCAAAAGAAAAACCGTACTCGGCACCAAG ACCGTTTTTAAACGGAAGGTCGACCAGGATGGCCGTGTAGAAAAATACAA GTGCCGCTTCGTGGCCGAGGGTTTCCGCGAGATCAAGGGGATCCATTACC AAGGGTCATCGTCGCCGACACCTACACAGTCGAGCATCCGGATGGCGCTG GCGGCGATGGCCCTGTTGGACTGGGGGGGGCGGCAGCTTGACGTAGAAAT GGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTTTACGTTGTGCTCCCCG ACGCGTATCGCGACTCGCCCATCCAGGTTGGACGACTACAGAAGGCCATG TACGGCCTGAAGCACGCCGGGCTACTGTGGTCGAAGAAGGTCGGCGGAGA GTTCATAGCGAAGGGGTTTGAAAGGTCCCAAGCCGATCCCTGTGTGTTCC GGCGGAAGCATCGAGGGAAGGTCGTCGTCATCATTGCGGTCTACGTTGAC GGTCTACTAGTGCTGAGCGAAACGAAGCAGGACGAGCATCAGGCACTGGA AGACCTTCGATCCAGCTTCCCCATCAGGGACTTAGGCGAGATCTCGTACT ACCTTGGTGTCACATTACTCGAGACCGCAAGGCCAGGACGGTGATGTTCG ATCAGCAGCGTTACGCGCAGGCGGTAACCGAGCGATTCGAAGTTCGGAAC ACCAGCGTGATCCCTGTTCCTACGGGGGAAGCGCCACTTTCGAAGGTAGA CGGGCCGCAAGACGACGCTGAGATCACAGAGATGCGTGGCATCCCGTATC GCGAGGCAGTGGGGGCACTAATGTGGGTAGCCAACATGACTTGGCCTGAC CTAGCTTACATCGCGCACACGCTCGCCAAGTTCGGTGACAACCGCGGGCC CGAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTACCTCAAACGAACGG CTAGCCTGGGGGTAACATATGGAGGCGCGACGAAGGACATGTAGCTATCA GCATGGTGGGACGCCGATCACGCATCACACCCTGATACGCGCCGTTCGGT ATCGGGGGGCGCGGTGATGCTCGGTGTAGGGGCAATCAGTTGGTTTTCGC GGACGCAGAGAATAACCGCGACAGCGACGTCGGAATCGAAGTACGTAGCA CTGGCGGAGATTGTTAACGAGTTGCGTTTCCTTCGGCAGGTGAAAGCGTT TATGGTACCTCCAATCGACACCAACATCTGTGTTCACGAGGACAACGAAG GCACTATCAAGATGGCAGGGAACAGGTTTAGCAGTCGACGAACAAGACAC ATCGACGTGAAGCATCATATGGTTCGGGATGCCGTCGATGGGGGAATAGT CCGTGTA
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Coding sequence (CDS) from alignment at F-distichus_contig102729:343..1799+

>mRNA_F-distichus_contig102729.239.1 ID=mRNA_F-distichus_contig102729.239.1|Name=mRNA_F-distichus_contig102729.239.1|organism=Fucus distichus monoicous|type=CDS|length=1728bp|location=Sequence derived from alignment at F-distichus_contig102729:343..1799+ (Fucus distichus monoicous)
ATGGACGGCCAGATTGCGCGTGGTGTGTGGAAGGTCGTCGATCGACCCAA
AAGAAAAACCGTACTCGGCACCAAGACCGTTTTTAAACGGAAGGTCGACC
AGGATGGCCGTGTAGAAAAATACAAGTGCCGCTTCGTGGCCGAGGGTTTC
CGCGAGATCAAGGGGATCCATTACCAAGGGTCATCGTCGCCGACACCTAC
ACAGTCGAGCATCCGGATGGCGCTGGCGGCGATGGCCCTGTTGGACTGGG
GGGGGCGGCAGCTTGACGTAGAAATGGCGTTTCTCGAGGCGGATGTTACG
GAGGAGCTTTACGTTGTGCTCCCCGACGCGTATCGCGACTCGCCCATCCA
GGTTGGACGACTACAGAAGGCCATGTACGGCCTGAAGCACGCCGGGCTAC
TGTGGTCGAAGAAGGTCGGCGGAGAGTTCATAGCGAAGGGGTTTGAAAGG
TCCCAAGCCGATCCCTGTGTGTTCCGGCGGAAGCATCGAGGGAAGGTCGT
CGTCATCATTGCGGTCTACGTTGACGGTCTACTAGTGCTGAGCGAAACGA
AGCAGGACGAGCATCAGGCACTGGAAGACCTTCGATCCAGCTTCCCCATC
AGGGACTTAGGCGAGATCTCGTACTACCTTGATGGACGGCCAGATTGCGC
GTGGTGTGTGGAAGGTCGTCGATCGACCCAAAAGAAAAACCGTACTCGGC
ACCAAGACCGTTTTTAAACGGAAGGTCGACCAGGATGGCCGTGTAGAAAA
ATACAAGTGCCGCTTCGTGGCCGAGGGTTTCCGCGAGATCAAGGGGATCC
ATTACCAAGGGTCATCGTCGCCGACACCTACACAGTCGAGCATCCGGATG
GCGCTGGCGGCGATGGCCCTGTTGGACTGGGGGGGGCGGCAGCTTGACGT
AGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTTTACGTTGTGC
TCCCCGACGCGTATCGCGACTCGCCCATCCAGGTTGGACGACTACAGAAG
GCCATGTACGGCCTGAAGCACGCCGGGCTACTGTGGTCGAAGAAGGTCGG
CGGAGAGTTCATAGCGAAGGGGTTTGAAAGGTCCCAAGCCGATCCCTGTG
TGTTCCGGCGGAAGCATCGAGGGAAGGTCGTCGTCATCATTGCGGTCTAC
GTTGACGGTCTACTAGTGCTGAGCGAAACGAAGCAGGACGAGCATCAGGC
ACTGGAAGACCTTCGATCCAGCTTCCCCATCAGGGACTTAGGCGAGATCT
CGTACTACCTTGACGACGCTGAGATCACAGAGATGCGTGGCATCCCGTAT
CGCGAGGCAGTGGGGGCACTAATGTGGGTAGCCAACATGACTTGGCCTGA
CCTAGCTTACATCGCGCACACGCTCGCCAAGTTCGGTGACAACCGCGGGC
CCGAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTACCTCAAACGAACG
GCTAGCCTGGGGGTAACATATGGAGGCGCGACGAAGGACATGTAGACGAC
GCTGAGATCACAGAGATGCGTGGCATCCCGTATCGCGAGGCAGTGGGGGC
ACTAATGTGGGTAGCCAACATGACTTGGCCTGACCTAGCTTACATCGCGC
ACACGCTCGCCAAGTTCGGTGACAACCGCGGGCCCGAGCACTGGAAGGCA
GTAATGAAAGCGCTACAGTACCTCAAACGAACGGCTAGCCTGGGGGTAAC
ATATGGAGGCGCGACGAAGGACATGTAG
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