prot_F-distichus_contig102729.239.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig102729.239.1
Unique Nameprot_F-distichus_contig102729.239.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length288
Homology
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: H3GJA9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJA9_PHYRM)

HSP 1 Score: 192 bits (488), Expect = 9.290e-52
Identity = 114/303 (37.62%), Postives = 160/303 (52.81%), Query Frame = 0
Query:   10 WKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRD--SPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYL--------DDAEITEMRGI-----------------PYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATK 285
            WK+VD P  K  +G K VF+ K D  G++ K+K R VA+GF +  G+ Y  + +P   + SI  A+A  A  D     +DV+ AFL  DV EELY+  PD + D  +P +   L +A+YG K A   W+ K+      +GF RS ADPCV+ R+   K  +II VYVD L++ S TK +  +  + L+  F I++LGE+ Y L        DD  I   +                   PYRE VGALM++A  T PD+A     +AKF +     HW A  + L+YLK T  LG+ + G TK
Sbjct:  817 WKLVDMPSDKKAIGCKWVFRIKRDPSGKIIKFKARLVAKGFTQCPGVDYTETFAPVARKESINTAVAIAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQVNPTKKCLLVQALYGTKQAARQWNSKLNKHLEGQGFHRSAADPCVYVRRSDSKFSIII-VYVDDLMIFSRTKAEIGEIKKPLKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRANSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCEWYNKSHWVAAKRILKYLKTTQDLGLVFNGGTK 1118          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A438FR77_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FR77_VITVI)

HSP 1 Score: 170 bits (431), Expect = 4.870e-47
Identity = 97/294 (32.99%), Postives = 161/294 (54.76%), Query Frame = 0
Query:    9 VWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQ--VGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYL--------------------DDAEITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTY 280
            VW++VD PK    +G K VFK K D  G VE+YK R VA+G+ + +GI +  + SP  T+ S R+ +A +A  D    Q+DV+ AFL  D++EE+Y+  P+ ++++  +  V RL++++YGLK A   W  K      + GF  ++ D CV+ + +  K + ++ +Y+D +L+ S      +     L ++F ++DLGE S+                      +D E   M+ IPY  A+G+LM+    T PD+A+I + L ++  N G +HW A  K ++YL+RT    + Y
Sbjct:    6 VWELVDLPKGYKPIGCKWVFKTKRDNKGNVERYKARLVAKGYTQREGIDFIETFSPVSTKDSFRLVMALVAHFDLELHQMDVKTAFLNGDLSEEVYMSQPEGFKENGKENMVCRLKRSIYGLKQASRQWYLKFDKIVTSFGFIENKFDQCVYMKVNGSKYIFMV-LYIDDILLASSDVNLLNDTKRILSANFDMKDLGEASFTCKAGDVPVVKGDKLSNEQCPKNDLEKDVMKTIPYASAIGSLMYAQVCTRPDIAFIVNVLGRYLSNPGHDHWVAAKKVMRYLQRTKDFMLVY 298          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A401GM49_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GM49_9APHY)

HSP 1 Score: 177 bits (450), Expect = 1.130e-46
Identity = 103/274 (37.59%), Postives = 157/274 (57.30%), Query Frame = 0
Query:   13 VDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYLDDAEITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKD 286
            V+RP+ + V+  K VFK K   DG +EKYK R VA+GF +++G+ +  + +P    +SIR  LA  A LD    Q+DV+ AFL  D+ EE+Y+ +P ++R     + RL KA+YGLK AG  W KK+  EF A GF R  +D  VF +   G  ++IIA+Y+D +L+LS+     +   +DL +  P+    ++   L +AEI      PY+ A+G+LM+    T PDLA+    L++       EHW A+M   +YL+ TA   + Y   T++
Sbjct:  913 VERPRNRKVVDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFTSIRTLLALTAKLDLEIHQMDVKSAFLNGDLDEEIYMNIPPSFRKDNKLIWRLNKALYGLKQAGHKWYKKICAEFEALGFTRCNSDHSVFYKNDNG-TLLIIAIYIDDMLILSDNPTAVNTLKDDLNT--PMAQNQKL-IKLSEAEIDPK---PYQSALGSLMYAMLGTRPDLAFAVGALSQHAAKPSKEHWNALMWVYRYLRGTAEKRLVYQTTTRE 1179          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A4Z0A072_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A072_9AGAM)

HSP 1 Score: 172 bits (437), Expect = 3.430e-45
Identity = 108/318 (33.96%), Postives = 158/318 (49.69%), Query Frame = 0
Query:    8 GVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQ---VGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYL--------------------DDA-----------------EITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATK 285
            G WK+V++P    ++G+K VFK K D  G + KYK R +A+GF +I G+ +  + +     SSIR+ +   A  +W   Q+DV+ A+L  D+ EE+Y+  P  +  +P Q   V  L K +YGLK AG  W KK+   F+  GF RS  D  VF R   G  +V+I V VD L + + +        + L + F + DLG++ + L                    D A                 +  EM  +PYREA+G+LM+ A  T PD+ Y   TL++F  N G  HW+   + L YLK T    +TYGG  K
Sbjct:  375 GTWKLVEKPDCVNIVGSKWVFKIKCDAAGAIIKYKARLMAQGFSQIPGVDFTDTFALVAKLSSIRILVVLAARFNWELHQMDVKNAYLNGDLDEEIYMKQPPGF-PAPGQEHKVCALFKPIYGLKQAGRRWYKKLCAAFLGMGFTRSSVDHSVFFRHGAGSEIVLITVSVDDLTIAATSVNAITDVKDALNARFEMTDLGKMHWLLGIKIKHDRGGGGRSRCRSPLDTALDPSFQLTTAQSPSTPQQYEEMCNVPYREAIGSLMYAALGTRPDIVYAVTTLSQFMQNPGRMHWEGTKRVLHYLKATKEEWLTYGGDAK 691          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: UPI0019549DCA (uncharacterized protein LOC120413002 n=1 Tax=Culex pipiens pallens TaxID=42434 RepID=UPI0019549DCA)

HSP 1 Score: 169 bits (427), Expect = 1.340e-43
Identity = 101/336 (30.06%), Postives = 165/336 (49.11%), Query Frame = 0
Query:    5 IARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSP--IQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEISYYLD---------------------------------------------------DAEITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTY--GGATK 285
            I+ G W++ D P+ ++ +  K V+K K+D +G +++YK R V +G+ + KG+ Y+ + +P    SS+R   A  A LD    Q+D   AFL+ +++EE+Y+  P  + D     +V RL+KA+YGLK +  +W+KK+           +  DPCV+  K RG  ++ +AVYVD +L+ S   + + +    L   F ++D+G   Y L                                                    D E   M+ +PY+EAVG LM++A  T PD+ Y  + L++F  N G +HW  V    +YL+ T+   +TY  GGA+K
Sbjct:  903 ISNGTWELCDLPEGRSAIKCKWVYKTKLDVNGDIDRYKARLVIKGYSQRKGVDYEETYAPVVRYSSLRYLFALAARLDMKVDQMDAITAFLQGELSEEIYMEQPPCFVDGKKRSKVCRLKKALYGLKQSSRVWNKKLDAALRKFDLVCTDYDPCVYT-KVRGDKMLFVAVYVDDVLIFSNCDRWKTEIKAQLSREFKMKDIGPAKYVLGIRVSRSKDEIALDQEKYVEAILSRFQMTDCKPVSTPMNVSEKLTRDACPSTDQEKERMKSVPYQEAVGCLMYLAQSTRPDICYAVNILSRFNSNPGEKHWCGVKHLFRYLRGTSKFRLTYTKGGASK 1237          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A0J7NHJ8_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NHJ8_LASNI)

HSP 1 Score: 168 bits (425), Expect = 2.400e-43
Identity = 105/338 (31.07%), Postives = 166/338 (49.11%), Query Frame = 0
Query:    2 DGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAY--RDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPIRDLGEI---------------------SYYLDDA--------------------------------EITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGGAT 284
            D  +    W +VD P  +  L  K VFK K D +  VE+YK R V +GF ++KG+ Y+ + SP    +SIR+ LA  A LD     LDV  AFL+ D++EE+Y+  P+    +    +V  L++ +YGLK     W++K+     + GF RS  D  ++ + H  K+V IIAVYVD LL+LS   + ++   + L   F ++DLG +                     + Y+D+                                 E+ +M  +PYREA+G++M++   T PD+A+   +L+ + +N G  HW AV +  +YLK T + G+ Y   T
Sbjct:  812 DALLENKTWDLVDLPPGRKPLKCKWVFKTKRDSNNDVERYKARLVVKGFSQVKGLDYEETYSPVVRYASIRILLALAAKLDLEVDHLDVVTAFLQGDLSEEIYMEQPEGSVTKGEESKVCLLRRPLYGLKQGSFEWNRKLDSALKSLGFTRSNVDQGIYIKHHDSKLV-IIAVYVDDLLLLSNDVKAKNLTKKQLHKKFEMKDLGAVRNLLGMQVHRDREQGKIFINQATYIDNILRRFNMCDCNPARTPSDPNQRLDKSMAPKSPDEVKDMEKVPYREALGSMMFLCQGTRPDIAHAITSLSVYSENPGKAHWAAVKRLFRYLKGTRNYGLIYSRDT 1148          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A2N9FJH4_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FJH4_FAGSY)

HSP 1 Score: 161 bits (408), Expect = 4.390e-41
Identity = 98/293 (33.45%), Postives = 160/293 (54.61%), Query Frame = 0
Query:   10 WKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVF-RRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALED----LRSSFPIRDLGEISYYLDDAEITEMRGIP---------YREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGG-ATKDM 287
            W +VD P  K+ +G K V+K K   DG +E+YK R VA+G+ +  GI Y+ + +P    +S+R  LA  A+  W   Q+DV+ AFL  D+TEE+Y+  P  Y D P +V  L++A+YGLK A   W  K        GF  S  D  +F RR  +G +++++  YVD +++     +D+H  + D    L   F ++DLG +SY+L     ++  G           YR+ VG+L+++  +T PD+A+  H +++F       H+ AV+  L+Y+K T   G+ +   +T D+
Sbjct:  689 WDLVDLPHGKSAIGCKWVYKIKTKSDGSIERYKARLVAKGYAQEYGIDYEETFAPVARITSVRSLLAIAAVHQWPLFQMDVKNAFLNGDLTEEVYMQAPPGYSDCPDKVCLLRRALYGLKQAPRAWFAKFSSIVHQFGFSSSSHDTALFIRRSDKGMILLLL--YVDDMIIT----RDDHSGISDFKLFLHQQFEMKDLGHLSYFLGLEVSSDSTGYYLSQANDATLYRQLVGSLVYLT-VTRPDIAHAVHLVSQFLSAPHSTHYAAVLHILRYIKGTMFHGLHFSAHSTLDL 974          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A2N9IZD8_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IZD8_FAGSY)

HSP 1 Score: 160 bits (404), Expect = 4.650e-41
Identity = 102/307 (33.22%), Postives = 166/307 (54.07%), Query Frame = 0
Query:    1 MDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSP---IQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVF-RRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLR----SSFPIRDLGEISYYL--DDAEITEMR-----------GIP------YREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTY 280
            +D  +  G W +VD P  K+ +G K V+K K   DG V++YK R VA+GF +  GI Y+ + +P    SS+R  +A  A   W   Q+DV+ AFL  ++TEE+Y+ LP ++   P    +V RL++A+YGLK A   W  K        GF  S  D  +F RR   G  + ++ +YVD +++      D+ Q ++DL+      F ++DLG +SY+L  +D++I +             G P      YR+ VG+L+++  +T PD++Y  H +++F       H+ AV++ L+YLK T   G+ +
Sbjct:  201 LDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPSFSQPPGFSPKVCRLRRALYGLKQAPRAWFAKFSSTISQHGFSASSYDSALFFRRSDHG--ITLLLLYVDDMIITG----DDVQGIQDLKRFLGQHFEMKDLGPLSYFLSLEDSKIVDTPIEYNNRLNTHDGEPLPDATLYRQLVGSLVYLT-VTRPDISYAVHIVSQFMAAPRSLHYAAVLRILRYLKGTLFHGLHF 500          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A2N9J915_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J915_FAGSY)

HSP 1 Score: 161 bits (407), Expect = 5.390e-41
Identity = 98/293 (33.45%), Postives = 159/293 (54.27%), Query Frame = 0
Query:   10 WKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVF-RRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALED----LRSSFPIRDLGEISYYLDDAEITEMRGIP---------YREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGG-ATKDM 287
            W +VD P  K+ +G K V+K K   DG +E+YK R VA+G+ +  GI Y+ + +P    +S+R  LA  A+  W   Q+DV+ AFL  D+TEE+Y+  P  Y D P +V  L++A+YGLK A   W  K        GF  S  D  +F RR  +G +++++  YVD +++      D+H  + D    L   F ++DLG +SY+L     ++  G           YR+ VG+L+++  +T PD+A+  H +++F       H+ AV+  L+Y+K T   G+ +   +T D+
Sbjct:  490 WDLVDLPPGKSAIGCKWVYKIKTKSDGSIERYKARLVAKGYAQEYGIDYEETFAPVARITSVRSLLAIAAVHQWPLFQMDVKNAFLNGDLTEEVYMQAPPGYSDCPDKVCLLRRALYGLKQAPRAWFAKFSSIVHQFGFSSSSHDTALFIRRSDKGMILLLL--YVDDMIITG----DDHSGISDFKLFLHQQFEMKDLGHLSYFLGLEVSSDSTGYYLSQANDATLYRQLVGSLVYLT-VTRPDIAHAVHLVSQFLSAPHSTHYAAVLHILRYIKGTMFHGLHFSAHSTLDL 775          
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Match: A0A2N9ERK1_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9ERK1_FAGSY)

HSP 1 Score: 160 bits (406), Expect = 8.110e-41
Identity = 98/293 (33.45%), Postives = 159/293 (54.27%), Query Frame = 0
Query:   10 WKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGFREIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVTEELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFERSQADPCVF-RRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALED----LRSSFPIRDLGEISYYLDDAEITEMRGIP---------YREAVGALMWVANMTWPDLAYIAHTLAKFGDNRGPEHWKAVMKALQYLKRTASLGVTYGG-ATKDM 287
            W +VD P  K+ +G K V+K K   DG +E+YK R VA+G+ +  GI Y+ + +P    +S+R  LA  A+  W   Q+DV+ AFL  D+TEE+Y+  P  Y D P +V  L++A+YGLK A   W  K        GF  S  D  +F RR  +G +++++  YVD +++      D+H  + D    L   F ++DLG +SY+L     ++  G           YR+ VG+L+++  +T PD+A+  H +++F       H+ AV+  L+Y+K T   G+ +   +T D+
Sbjct:  686 WDLVDLPHGKSAIGCKWVYKIKTKSDGSIERYKARLVAKGYAQEYGIDYEETFAPVARITSVRSLLAIAAVHQWPLFQMDVKNAFLNGDLTEEVYMQAPPGYSDYPDKVCLLRRALYGLKQAPRAWFAKFSSIVHQFGFSSSSHDTALFIRRSDKGMILLLL--YVDDMIITG----DDHSGISDFKLFLHQQFEMKDLGHLSYFLGLEVSSDSTGYYLSQANDATLYRQLVGSLVYLT-VTRPDIAHAVHLVSQFLSAPHSTHYAAVLHILRYIKGTMFHGLHFSAHSTLDL 971          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102729.239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GJA9_PHYRM9.290e-5237.62Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A438FR77_VITVI4.870e-4732.99Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GM49_9APHY1.130e-4637.59Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Z0A072_9AGAM3.430e-4533.96Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI0019549DCA1.340e-4330.06uncharacterized protein LOC120413002 n=1 Tax=Culex... [more]
A0A0J7NHJ8_LASNI2.400e-4331.07Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
A0A2N9FJH4_FAGSY4.390e-4133.45CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]
A0A2N9IZD8_FAGSY4.650e-4133.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9J915_FAGSY5.390e-4133.45Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9ERK1_FAGSY8.110e-4133.45Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..211
e-value: 4.5E-44
score: 150.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..210
NoneNo IPR availablePANTHERPTHR11439:SF267coord: 5..210

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..211
e-value: 4.5E-44
score: 150.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..210
NoneNo IPR availablePANTHERPTHR11439:SF267coord: 5..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102729contigF-distichus_contig102729:418..1436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102729.239.1mRNA_F-distichus_contig102729.239.1Fucus distichus monoicousmRNAF-distichus_contig102729 343..1799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig102729.239.1 ID=prot_F-distichus_contig102729.239.1|Name=mRNA_F-distichus_contig102729.239.1|organism=Fucus distichus monoicous|type=polypeptide|length=288bp
MDGQIARGVWKVVDRPKRKTVLGTKTVFKRKVDQDGRVEKYKCRFVAEGF
REIKGIHYQGSSSPTPTQSSIRMALAAMALLDWGGRQLDVEMAFLEADVT
EELYVVLPDAYRDSPIQVGRLQKAMYGLKHAGLLWSKKVGGEFIAKGFER
SQADPCVFRRKHRGKVVVIIAVYVDGLLVLSETKQDEHQALEDLRSSFPI
RDLGEISYYLDDAEITEMRGIPYREAVGALMWVANMTWPDLAYIAHTLAK
FGDNRGPEHWKAVMKALQYLKRTASLGVTYGGATKDM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like