mRNA_F-distichus_contig101972.161.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A5S6QG42_TRIMR (Uncharacterized protein n=5 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QG42_TRIMR) HSP 1 Score: 63.5 bits (153), Expect = 2.300e-9 Identity = 36/110 (32.73%), Postives = 59/110 (53.64%), Query Frame = 1
Query: 16 WESDSGATFHMSHTRAGMSAYKKALPG-TNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLSIVKAVEQWGKPLIYYRNEAVLGFPGEESLVFK 342
W DSGAT HMS + +K P T V+IADG++LP+ G + L + + T K + +VPG+ +LS+ + VE G+ +++ RN + F ++ LV +
Sbjct: 283 WVIDSGATHHMSPNEEYFTKWKAKSPANTQVQIADGSVLPIANAGTVRAKLTRNKGTVKEFSAKNTLFVPGIRTGILSVPQMVEN-GQTVVFSRNGCRI-FGADDQLVIE 390
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: UPI0017832608 (uncharacterized protein LOC118757367 n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI0017832608) HSP 1 Score: 55.1 bits (131), Expect = 6.240e-7 Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 16 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLS 246
W DS AT HM+ R S +K G+ V++A+ + L ++ G I +D+ + K V++++V YVP LS+NLLS
Sbjct: 16 WYVDSAATKHMTFHREWFSTLRKYTTGSKVKVANNSYLQIEAIGTILIDVKVDNQW-KPVRLENVLYVPELSENLLS 91
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: UPI0017828D95 (uncharacterized protein LOC118735278 n=2 Tax=Rhagoletis TaxID=28609 RepID=UPI0017828D95) HSP 1 Score: 55.1 bits (131), Expect = 1.820e-6 Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 16 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLS 246
W DS AT HM+ R S +K G+ V++A+ + L ++ G I +D+ + K V++++V YVP LS+NLLS
Sbjct: 257 WYVDSAATKHMTFHREWFSTLRKYTTGSKVKVANNSYLQIEAIGTILIDVKVDNQW-KPVRLENVLYVPELSENLLS 332
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A0P1ACE6_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACE6_PLAHL) HSP 1 Score: 53.9 bits (128), Expect = 4.760e-6 Identity = 29/85 (34.12%), Postives = 48/85 (56.47%), Query Frame = 1
Query: 16 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADG--NILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLSIVKAVE 264
W DSG T H++H S + + +N I G N +P++G G+IE+++ + T +M+ + DV Y P L +LLS+ AV+
Sbjct: 229 WTIDSGCTRHVTHE----SQWFSTISASNGSITVGVKNQIPIEGIGKIELEVTDSKGTQRMLTLHDVLYAPELKFSLLSVPAAVK 309
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A7D9IJR2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IJR2_PARCT) HSP 1 Score: 52.4 bits (124), Expect = 1.640e-5 Identity = 32/102 (31.37%), Postives = 52/102 (50.98%), Query Frame = 1
Query: 4 RKEEWESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPR-RTTKMVKMDDVAYVPGLSQNLLSIVKAVEQWGKPLIYYRNEAV 306
R W DSGAT HM + + +V +ADG+++ G G ++ ++ P + K + DV YVP LS NL+S+ KA + GK Y +++ +
Sbjct: 51 RTNTWIIDSGATCHMCNDASQFVKLHNLEKPEDVTLADGHVVKATGRGVVKTKIESPNGQKGKSCVLQDVLYVPSLSNNLVSVSKATKS-GKTEDYDKSKDI 151
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A225UU99_9STRA (Pol Polyprotein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UU99_9STRA) HSP 1 Score: 50.8 bits (120), Expect = 6.050e-5 Identity = 25/83 (30.12%), Postives = 45/83 (54.22%), Query Frame = 1
Query: 16 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLSIVKAVE 264
W DSG T H+SH + + G ++ + N +P++G GR+E+++ + T + + + V Y P L +LLS+ AV+
Sbjct: 205 WTIDSGCTRHVSHESQWFTDITTS--GGSITVGGNNQIPIEGIGRVELEVSDSKGTMQKLILHGVLYAPQLQFSLLSVPAAVK 285
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A2P4XU07_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XU07_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 9.920e-5 Identity = 25/83 (30.12%), Postives = 44/83 (53.01%), Query Frame = 1
Query: 16 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLSIVKAVE 264
W D G T H++H S A G ++ + N +P++G GR+E+++ + T + + + V Y P L +LLS+ AV+
Sbjct: 153 WTIDPGCTRHVTHESQWFSDI--AASGGSITVGGNNQIPIEGIGRVELEVSDSKGTMQNLILHGVLYAPQLQFSLLSVPAAVK 233 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig101972.161.1 >prot_F-distichus_contig101972.161.1 ID=prot_F-distichus_contig101972.161.1|Name=mRNA_F-distichus_contig101972.161.1|organism=Fucus distichus monoicous|type=polypeptide|length=114bp DRKEEWESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRback to top mRNA from alignment at F-distichus_contig101972:1708..2049- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig101972.161.1 ID=mRNA_F-distichus_contig101972.161.1|Name=mRNA_F-distichus_contig101972.161.1|organism=Fucus distichus monoicous|type=mRNA|length=342bp|location=Sequence derived from alignment at F-distichus_contig101972:1708..2049- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig101972:1708..2049- >mRNA_F-distichus_contig101972.161.1 ID=mRNA_F-distichus_contig101972.161.1|Name=mRNA_F-distichus_contig101972.161.1|organism=Fucus distichus monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at F-distichus_contig101972:1708..2049- (Fucus distichus monoicous)back to top |